RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 LYG2Q86SG7 212 aa3.84□□□□□ -1.79
CD44-202ENST00000278385 MYPOPQ86VE0 399 aaPredicted RBP3.84□□□□□ -1.79
CD44-202ENST00000278385 DEFB106AQ8N104 65 aa3.84□□□□□ -1.79
CD44-202ENST00000278385 NRACQ8N912 160 aa3.84□□□□□ -1.79
CD44-202ENST00000278385 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.84□□□□□ -1.79
CD44-202ENST00000278385 OR9A4Q8NGU2 314 aa3.84□□□□□ -1.79
CD44-202ENST00000278385 ZPLD1Q8TCW7 415 aa3.84□□□□□ -1.79
CD44-202ENST00000278385 ACTRT1Q8TDG2 376 aa3.84□□□□□ -1.79
CD44-202ENST00000278385 HPSE2Q8WWQ2 592 aa3.84□□□□□ -1.79
CD44-202ENST00000278385 IFT81Q8WYA0 676 aa3.84□□□□□ -1.79
CD44-202ENST00000278385 DNASE2BQ8WZ79 361 aa3.84□□□□□ -1.79
CD44-202ENST00000278385 RTP4Q96DX8 246 aa3.84□□□□□ -1.79
CD44-202ENST00000278385 LPAR4Q99677 370 aa3.84□□□□□ -1.79
CD44-202ENST00000278385 CABLES2Q9BTV7 478 aa3.84□□□□□ -1.79
CD44-202ENST00000278385 PELI2Q9HAT8 420 aa3.84□□□□□ -1.79
CD44-202ENST00000278385 PARVBQ9HBI1 364 aa3.84□□□□□ -1.79
CD44-202ENST00000278385 SIX2Q9NPC8 291 aa3.84□□□□□ -1.79
CD44-202ENST00000278385 MCUBQ9NWR8 336 aa3.84□□□□□ -1.79
CD44-202ENST00000278385 HRASLS2Q9NWW9 162 aa3.84□□□□□ -1.79
CD44-202ENST00000278385 DDIT4Q9NX09 232 aa3.84□□□□□ -1.79
CD44-202ENST00000278385 SDHAF2Q9NX18 166 aa3.84□□□□□ -1.79
CD44-202ENST00000278385 SLC25A37Q9NYZ2 338 aa3.84□□□□□ -1.79
CD44-202ENST00000278385 ELF5Q9UKW6 265 aaPredicted RBP3.84□□□□□ -1.79
CD44-202ENST00000278385 KCNIP3Q9Y2W7 256 aa3.84□□□□□ -1.79
CD44-202ENST00000278385 PTPRZ1P23471 2315 aaPredicted RBP3.84□□□□□ -1.79
CD44-202ENST00000278385 CACNA1HO95180 2353 aa3.84□□□□□ -1.79
CD44-202ENST00000278385 NUP210Q8TEM1 1887 aaPredicted RBP3.84□□□□□ -1.8
CD44-202ENST00000278385 CACNA1IQ9P0X4 2223 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 PIEZO1Q92508 2521 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 TRAV8-7A0A075B6U6 113 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 A0A087WZ39 114 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 KIR2DL5BA0A0G2JN68 375 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 KIR2DL5BA0A0G2JPC4 375 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 A0A1B0GU03 582 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 A0A1W2PR80 420 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 hDV102S1A0JD36 115 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 GAGE12JA6NER3 117 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 SEC14L6B5MCN3 397 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 F5H768 121 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 H3BMQ9 156 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.83□□□□□ -1.8
CD44-202ENST00000278385 FADS1O60427 444 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 SHOX2O60902 331 aaPredicted RBP3.83□□□□□ -1.8
CD44-202ENST00000278385 CLDN11O75508 207 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 TRAPPC6AO75865 159 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 GLSO94925 669 aaPredicted RBP3.83□□□□□ -1.8
CD44-202ENST00000278385 LSM8O95777 96 aaKnown RBP3.83□□□□□ -1.8
CD44-202ENST00000278385 ANGPTL1O95841 491 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 OXTP01178 125 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 HBE1P02100 147 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 CALB1P05937 261 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 PSG1P11464 419 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 FGF3P11487 239 aaPredicted RBP3.83□□□□□ -1.8
CD44-202ENST00000278385 HLA-EP13747 358 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 MYOD1P15172 320 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 LOXP28300 417 aaPredicted RBP3.83□□□□□ -1.8
CD44-202ENST00000278385 CD70P32970 193 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 TIMP3P35625 211 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 TMEM33P57088 247 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 FBXW4P57775 412 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 TAS2R60P59551 318 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 HILS1P60008 231 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 RPS14P62263 151 aaKnown RBP3.83□□□□□ -1.8
CD44-202ENST00000278385 RANP62826 216 aaKnown RBP3.83□□□□□ -1.8
CD44-202ENST00000278385 RPS24P62847 133 aaKnown RBP3.83□□□□□ -1.8
CD44-202ENST00000278385 ZNF33BQ06732 778 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 ILF3Q12906 894 aaKnown RBP eCLIP3.83□□□□□ -1.8
CD44-202ENST00000278385 SRSF9Q13242 221 aaKnown RBP eCLIP3.83□□□□□ -1.8
CD44-202ENST00000278385 AQP6Q13520 282 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 RAB31Q13636 194 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 PTGR1Q14914 329 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 ABRAXAS2Q15018 415 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 PON3Q15166 354 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 RAB35Q15286 201 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 TAF1AQ15573 450 aaPredicted RBP3.83□□□□□ -1.8
CD44-202ENST00000278385 BRMS1LQ5PSV4 323 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 DCST2Q5T1A1 773 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 N4BP2L1Q5TBK1 243 aaPredicted RBP3.83□□□□□ -1.8
CD44-202ENST00000278385 IRAK1BP1Q5VVH5 260 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 HACD4Q5VWC8 232 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 FRMPD2BQ6IN97 320 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 STAC2Q6ZMT1 411 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 SLC16A12Q6ZSM3 486 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 Q6ZVQ6 151 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 FAM183BPQ6ZVS7 135 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 ASB18Q6ZVZ8 466 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 MRPL52Q86TS9 123 aaKnown RBP3.83□□□□□ -1.8
CD44-202ENST00000278385 RNF113BQ8IZP6 322 aaKnown RBP3.83□□□□□ -1.8
CD44-202ENST00000278385 PUSL1Q8N0Z8 303 aaKnown RBP3.83□□□□□ -1.8
CD44-202ENST00000278385 KIR2DL5AQ8N109 375 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 DEFB119Q8N690 84 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 PXT1Q8NFP0 134 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 OR9Q2Q8NGE9 314 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 OR5L1Q8NGL2 311 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 OR51A7Q8NH64 312 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 KIR2DL5BQ8NHK3 375 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 SYNPRQ8TBG9 265 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 UFD1Q92890 307 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 TCEAL3Q969E4 200 aa3.83□□□□□ -1.8
CD44-202ENST00000278385 CREB3L1Q96BA8 519 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms