RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 YIPF5Q969M3 257 aa10.08□□□□□ -0.8
SCAF11-201ENST00000266589 ABHD17AQ96GS6 310 aa10.08□□□□□ -0.8
SCAF11-201ENST00000266589 REEP6Q96HR9 211 aa10.08□□□□□ -0.8
SCAF11-201ENST00000266589 NOX3Q9HBY0 568 aa10.08□□□□□ -0.8
SCAF11-201ENST00000266589 ATPIF1Q9UII2 106 aa10.08□□□□□ -0.8
SCAF11-201ENST00000266589 LAMA5O15230 3695 aa10.07□□□□□ -0.8
SCAF11-201ENST00000266589 URB1O60287 2271 aaKnown RBP10.07□□□□□ -0.8
SCAF11-201ENST00000266589 K7ENP7 123 aa10.07□□□□□ -0.8
SCAF11-201ENST00000266589 CTDSPLO15194 276 aa10.07□□□□□ -0.8
SCAF11-201ENST00000266589 LYRM1O43325 122 aa10.07□□□□□ -0.8
SCAF11-201ENST00000266589 CTAG2O75638 210 aa10.07□□□□□ -0.8
SCAF11-201ENST00000266589 IL18BPO95998 194 aa10.07□□□□□ -0.8
SCAF11-201ENST00000266589 HCKP08631 526 aa10.07□□□□□ -0.8
SCAF11-201ENST00000266589 FAHP16930 419 aa10.07□□□□□ -0.8
SCAF11-201ENST00000266589 THBS4P35443 961 aa10.07□□□□□ -0.8
SCAF11-201ENST00000266589 ZNF93P35789 620 aaPredicted RBP10.07□□□□□ -0.8
SCAF11-201ENST00000266589 MAP2K3P46734 347 aa10.07□□□□□ -0.8
SCAF11-201ENST00000266589 PTH2RP49190 550 aa10.07□□□□□ -0.8
SCAF11-201ENST00000266589 ACSF3Q4G176 576 aaPredicted RBP10.07□□□□□ -0.8
SCAF11-201ENST00000266589 ZNF585AQ6P3V2 769 aa10.07□□□□□ -0.8
SCAF11-201ENST00000266589 ANKRD16Q6P6B7 361 aa10.07□□□□□ -0.8
SCAF11-201ENST00000266589 INO80CQ6PI98 192 aaPredicted RBP10.07□□□□□ -0.8
SCAF11-201ENST00000266589 TFAP2EQ6VUC0 442 aa10.07□□□□□ -0.8
SCAF11-201ENST00000266589 Q6ZSR3 168 aa10.07□□□□□ -0.8
SCAF11-201ENST00000266589 C9orf106Q8NAJ2 232 aa10.07□□□□□ -0.8
SCAF11-201ENST00000266589 CCDC54Q8NEL0 328 aa10.07□□□□□ -0.8
SCAF11-201ENST00000266589 OR1K1Q8NGR3 316 aa10.07□□□□□ -0.8
SCAF11-201ENST00000266589 SMIM4Q8WVI0 70 aa10.07□□□□□ -0.8
SCAF11-201ENST00000266589 GCDHQ92947 438 aaPredicted RBP10.07□□□□□ -0.8
SCAF11-201ENST00000266589 SPACA5Q96QH8 159 aa10.07□□□□□ -0.8
SCAF11-201ENST00000266589 UQCC2Q9BRT2 126 aa10.07□□□□□ -0.8
SCAF11-201ENST00000266589 AUNIPQ9H7T9 357 aa10.07□□□□□ -0.8
SCAF11-201ENST00000266589 PIGLQ9Y2B2 252 aa10.07□□□□□ -0.8
SCAF11-201ENST00000266589 SPENQ96T58 3664 aaKnown RBP10.07□□□□□ -0.8
SCAF11-201ENST00000266589 AHRRA9YTQ3 701 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 RRP8O43159 456 aaKnown RBP10.06□□□□□ -0.8
SCAF11-201ENST00000266589 GSTZ1O43708 216 aaPredicted RBP10.06□□□□□ -0.8
SCAF11-201ENST00000266589 CRYABP02511 175 aaKnown RBP10.06□□□□□ -0.8
SCAF11-201ENST00000266589 ARR3P36575 388 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 TAS2R20P59543 309 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 GUSBP1Q15486 140 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 HIKESHIQ53FT3 197 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 HACD4Q5VWC8 232 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 MZT2BQ6NZ67 158 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 MTFR2Q6P444 385 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 KRT74Q7RTS7 529 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 BIVMQ86UB2 503 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 CELF2-AS1Q8N7Q2 184 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 CNEP1R1Q8N9A8 125 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 ENKURQ8TC29 256 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 SNRNP27Q8WVK2 155 aaKnown RBP10.06□□□□□ -0.8
SCAF11-201ENST00000266589 WNT2BQ93097 391 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 MYEF2Q9P2K5 600 aaKnown RBP10.06□□□□□ -0.8
SCAF11-201ENST00000266589 TP53TG5Q9Y2B4 290 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 LOC100509620A0A075B734 347 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 IGKV1-9A0A0C4DH69 117 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 XRCC3O43542 346 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 MNDAP41218 407 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 SRP9P49458 86 aaKnown RBP10.06□□□□□ -0.8
SCAF11-201ENST00000266589 CAPZA1P52907 286 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 RAB1AP62820 205 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 TBR1Q16650 682 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 OR10K2Q6IF99 312 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 TMEM53Q6P2H8 277 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 RNF144BQ7Z419 303 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 TOMM5Q8N4H5 51 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 SEMA6DQ8NFY4 1073 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 PP6455Q8WZ26 134 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 EXTL1Q92935 676 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 PHF21AQ96BD5 680 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 C10orf35Q96D05 121 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 GPR137Q96N19 417 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 CHST5Q9GZS9 411 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 ATG5Q9H1Y0 275 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 DIABLOQ9NR28 239 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 B3GNT2Q9NY97 397 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 APC2O95996 2303 aa10.06□□□□□ -0.8
SCAF11-201ENST00000266589 PRRC2CQ9Y520 2896 aaKnown RBP10.06□□□□□ -0.8
SCAF11-201ENST00000266589 DOCK7Q96N67 2140 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 GGT3PA6NGU5 568 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 LDLRAD4O15165 306 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 KDM4BO94953 1096 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 COX5BP10606 129 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 PTHLHP12272 177 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 CCL2P13500 99 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 EDN3P14138 238 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 GABRA1P14867 456 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 CCNOP22674 350 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 ACKR3P25106 362 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 STOMP27105 288 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 KIR2DL3P43628 341 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 DMRTC1Q5HYR2 192 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 NSUN5P2Q63ZY6 315 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 AWAT2Q6E213 333 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 OR2A2Q6IF42 318 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 CADM3Q8N126 398 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 NPRL2Q8WTW4 380 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 BCL2L2Q92843 193 aaPredicted RBP10.05□□□□□ -0.8
SCAF11-201ENST00000266589 GAL3ST1Q99999 423 aa10.05□□□□□ -0.8
SCAF11-201ENST00000266589 C1QTNF5Q9BXJ0 243 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms