RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 TOR3AQ9H497 397 aa13.47□□□□□ -0.25
USE1-201ENST00000263897 NTN4Q9HB63 628 aa13.47□□□□□ -0.25
USE1-201ENST00000263897 MRPL15Q9P015 296 aaKnown RBP13.47□□□□□ -0.25
USE1-201ENST00000263897 MIOXQ9UGB7 285 aa13.47□□□□□ -0.25
USE1-201ENST00000263897 LRCH1Q9Y2L9 728 aa13.47□□□□□ -0.25
USE1-201ENST00000263897 PPIAL4AQ9Y536 164 aa13.47□□□□□ -0.25
USE1-201ENST00000263897 XRCC2O43543 280 aa13.46□□□□□ -0.25
USE1-201ENST00000263897 FAM20BO75063 409 aa13.46□□□□□ -0.25
USE1-201ENST00000263897 PTBP3O95758 552 aaKnown RBP13.46□□□□□ -0.25
USE1-201ENST00000263897 APOC1P02654 83 aa13.46□□□□□ -0.25
USE1-201ENST00000263897 IRF2P14316 349 aa13.46□□□□□ -0.25
USE1-201ENST00000263897 DDOSTP39656 456 aa13.46□□□□□ -0.25
USE1-201ENST00000263897 BNIP1Q12981 228 aa13.46□□□□□ -0.25
USE1-201ENST00000263897 ZNF154Q13106 437 aa13.46□□□□□ -0.25
USE1-201ENST00000263897 PRAMEF6Q5VXH4 476 aa13.46□□□□□ -0.25
USE1-201ENST00000263897 PLBD1Q6P4A8 553 aa13.46□□□□□ -0.25
USE1-201ENST00000263897 USP43Q70EL4 1123 aa13.46□□□□□ -0.25
USE1-201ENST00000263897 KLBQ86Z14 1044 aa13.46□□□□□ -0.25
USE1-201ENST00000263897 CPOQ8IVL8 374 aa13.46□□□□□ -0.25
USE1-201ENST00000263897 PLPP7Q8NBV4 271 aa13.46□□□□□ -0.25
USE1-201ENST00000263897 SEMA6DQ8NFY4 1073 aa13.46□□□□□ -0.25
USE1-201ENST00000263897 OR11L1Q8NGX0 322 aa13.46□□□□□ -0.25
USE1-201ENST00000263897 ZFAND2BQ8WV99 257 aa13.46□□□□□ -0.25
USE1-201ENST00000263897 SGK3Q96BR1 496 aa13.46□□□□□ -0.25
USE1-201ENST00000263897 OPA3Q9H6K4 179 aa13.46□□□□□ -0.25
USE1-201ENST00000263897 SP140LQ9H930 580 aa13.46□□□□□ -0.25
USE1-201ENST00000263897 UFSP2Q9NUQ7 469 aa13.46□□□□□ -0.25
USE1-201ENST00000263897 INSIG2Q9Y5U4 225 aa13.46□□□□□ -0.25
USE1-201ENST00000263897 RGS9O75916 674 aaPredicted RBP13.45□□□□□ -0.26
USE1-201ENST00000263897 HSD11B1P28845 292 aa13.45□□□□□ -0.26
USE1-201ENST00000263897 CX3CR1P49238 355 aa13.45□□□□□ -0.26
USE1-201ENST00000263897 HILS1P60008 231 aa13.45□□□□□ -0.26
USE1-201ENST00000263897 ZNF404Q494X3 552 aa13.45□□□□□ -0.26
USE1-201ENST00000263897 PRSS45Q7RTY3 260 aa13.45□□□□□ -0.26
USE1-201ENST00000263897 SPERTQ8NA61 448 aa13.45□□□□□ -0.26
USE1-201ENST00000263897 OR56B2PQ8NGI1 322 aa13.45□□□□□ -0.26
USE1-201ENST00000263897 ZMYND19Q96E35 227 aaPredicted RBP13.45□□□□□ -0.26
USE1-201ENST00000263897 NRBF2Q96F24 287 aa13.45□□□□□ -0.26
USE1-201ENST00000263897 NEIL1Q96FI4 390 aaPredicted RBP13.45□□□□□ -0.26
USE1-201ENST00000263897 AMELYQ99218 206 aa13.45□□□□□ -0.26
USE1-201ENST00000263897 ADAT1Q9BUB4 502 aaKnown RBP13.45□□□□□ -0.26
USE1-201ENST00000263897 SSBP3Q9BWW4 388 aaPredicted RBP13.45□□□□□ -0.26
USE1-201ENST00000263897 FN3KRPQ9HA64 309 aa13.45□□□□□ -0.26
USE1-201ENST00000263897 RNF7Q9UBF6 113 aa13.45□□□□□ -0.26
USE1-201ENST00000263897 AUP1Q9Y679 476 aa13.45□□□□□ -0.26
USE1-201ENST00000263897 PRODHO43272 600 aa13.44□□□□□ -0.26
USE1-201ENST00000263897 TBX1O43435 398 aa13.44□□□□□ -0.26
USE1-201ENST00000263897 ANXA2P07355 339 aaKnown RBP13.44□□□□□ -0.26
USE1-201ENST00000263897 RPS2P15880 293 aaKnown RBP13.44□□□□□ -0.26
USE1-201ENST00000263897 FPR2P25090 351 aa13.44□□□□□ -0.26
USE1-201ENST00000263897 OPRL1P41146 370 aa13.44□□□□□ -0.26
USE1-201ENST00000263897 FAM3AP98173 230 aa13.44□□□□□ -0.26
USE1-201ENST00000263897 PAX2Q02962 417 aa13.44□□□□□ -0.26
USE1-201ENST00000263897 PAX8Q06710 450 aa13.44□□□□□ -0.26
USE1-201ENST00000263897 TMEM236Q5W0B7 351 aa13.44□□□□□ -0.26
USE1-201ENST00000263897 SLC16A9Q7RTY1 509 aa13.44□□□□□ -0.26
USE1-201ENST00000263897 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.44□□□□□ -0.26
USE1-201ENST00000263897 ZNF454Q8N9F8 522 aa13.44□□□□□ -0.26
USE1-201ENST00000263897 OR52H1Q8NGJ2 320 aa13.44□□□□□ -0.26
USE1-201ENST00000263897 OTOSQ8NHW6 89 aa13.44□□□□□ -0.26
USE1-201ENST00000263897 DVL3Q92997 716 aaPredicted RBP13.44□□□□□ -0.26
USE1-201ENST00000263897 PLEKHA8Q96JA3 519 aa13.44□□□□□ -0.26
USE1-201ENST00000263897 SUCNR1Q9BXA5 334 aa13.44□□□□□ -0.26
USE1-201ENST00000263897 SLC25A19Q9HC21 320 aa13.44□□□□□ -0.26
USE1-201ENST00000263897 OR5V1Q9UGF6 321 aa13.44□□□□□ -0.26
USE1-201ENST00000263897 SELENOFO60613 162 aa13.43□□□□□ -0.26
USE1-201ENST00000263897 TIPRLO75663 272 aa13.43□□□□□ -0.26
USE1-201ENST00000263897 LYNP07948 512 aa13.43□□□□□ -0.26
USE1-201ENST00000263897 H2BFMP0C1H6 154 aa13.43□□□□□ -0.26
USE1-201ENST00000263897 CD80P33681 288 aa13.43□□□□□ -0.26
USE1-201ENST00000263897 CRISP1P54107 249 aa13.43□□□□□ -0.26
USE1-201ENST00000263897 ZNF121P58317 390 aaPredicted RBP13.43□□□□□ -0.26
USE1-201ENST00000263897 GNB2P62879 340 aa13.43□□□□□ -0.26
USE1-201ENST00000263897 MZT1Q08AG7 82 aa13.43□□□□□ -0.26
USE1-201ENST00000263897 TIGD6Q17RP2 521 aa13.43□□□□□ -0.26
USE1-201ENST00000263897 KLHL12Q53G59 568 aa13.43□□□□□ -0.26
USE1-201ENST00000263897 SLC35D3Q5M8T2 416 aa13.43□□□□□ -0.26
USE1-201ENST00000263897 LYPD2Q6UXB3 125 aa13.43□□□□□ -0.26
USE1-201ENST00000263897 DCDC5Q6ZRR9 648 aa13.43□□□□□ -0.26
USE1-201ENST00000263897 FAM57BQ71RH2 274 aa13.43□□□□□ -0.26
USE1-201ENST00000263897 NLRC3Q7RTR2 1065 aa13.43□□□□□ -0.26
USE1-201ENST00000263897 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.43□□□□□ -0.26
USE1-201ENST00000263897 OR8B3Q8NGG8 313 aa13.43□□□□□ -0.26
USE1-201ENST00000263897 THEM6Q8WUY1 208 aa13.43□□□□□ -0.26
USE1-201ENST00000263897 RAB40AQ8WXH6 277 aa13.43□□□□□ -0.26
USE1-201ENST00000263897 DNAJC9Q8WXX5 260 aa13.43□□□□□ -0.26
USE1-201ENST00000263897 UTP4Q969X6 686 aaKnown RBP13.43□□□□□ -0.26
USE1-201ENST00000263897 REEP6Q96HR9 211 aa13.43□□□□□ -0.26
USE1-201ENST00000263897 OR8B2Q96RD0 313 aa13.43□□□□□ -0.26
USE1-201ENST00000263897 JMJD8Q96S16 334 aa13.43□□□□□ -0.26
USE1-201ENST00000263897 MRI1Q9BV20 369 aa13.43□□□□□ -0.26
USE1-201ENST00000263897 TEX12Q9BXU0 123 aa13.43□□□□□ -0.26
USE1-201ENST00000263897 DNAJC27Q9NZQ0 273 aa13.43□□□□□ -0.26
USE1-201ENST00000263897 ZNF319Q9P2F9 582 aa13.43□□□□□ -0.26
USE1-201ENST00000263897 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.42□□□□□ -0.26
USE1-201ENST00000263897 ANKRD30BLA7E2S9 258 aa13.42□□□□□ -0.26
USE1-201ENST00000263897 GRPP07492 148 aa13.42□□□□□ -0.26
USE1-201ENST00000263897 SLC2A5P22732 501 aa13.42□□□□□ -0.26
USE1-201ENST00000263897 CFL1P23528 166 aaKnown RBP13.42□□□□□ -0.26
USE1-201ENST00000263897 PSMB10P40306 273 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms