RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 TMED6Q8WW62 240 aa16.4■□□□□ 0.22
LRP3-201ENST00000253193 EHFQ9NZC4 300 aa16.4■□□□□ 0.22
LRP3-201ENST00000253193 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.39■□□□□ 0.21
LRP3-201ENST00000253193 TEX13DA0A0J9YY54 714 aaPredicted RBP16.39■□□□□ 0.21
LRP3-201ENST00000253193 A0A1W2PR77 199 aa16.39■□□□□ 0.21
LRP3-201ENST00000253193 BCKDHBP21953 392 aa16.39■□□□□ 0.21
LRP3-201ENST00000253193 CX3CR1P49238 355 aa16.39■□□□□ 0.21
LRP3-201ENST00000253193 AFF3P51826 1226 aaKnown RBP16.39■□□□□ 0.21
LRP3-201ENST00000253193 LY6G6FQ5SQ64 297 aa16.39■□□□□ 0.21
LRP3-201ENST00000253193 LPCAT3Q6P1A2 487 aa16.39■□□□□ 0.21
LRP3-201ENST00000253193 TMEM104Q8NE00 496 aa16.39■□□□□ 0.21
LRP3-201ENST00000253193 KCNG3Q8TAE7 436 aa16.39■□□□□ 0.21
LRP3-201ENST00000253193 OIT3Q8WWZ8 545 aa16.39■□□□□ 0.21
LRP3-201ENST00000253193 TWSG1Q9GZX9 223 aa16.39■□□□□ 0.21
LRP3-201ENST00000253193 ALKBH4Q9NXW9 302 aa16.39■□□□□ 0.21
LRP3-201ENST00000253193 NPIPB7O75200 414 aa16.39■□□□□ 0.21
LRP3-201ENST00000253193 GABRR1P24046 479 aa16.39■□□□□ 0.21
LRP3-201ENST00000253193 PSMB6P28072 239 aa16.39■□□□□ 0.21
LRP3-201ENST00000253193 BLVRBP30043 206 aaPredicted RBP16.39■□□□□ 0.21
LRP3-201ENST00000253193 RIPPLY1Q0D2K3 151 aa16.39■□□□□ 0.21
LRP3-201ENST00000253193 MFAP5Q13361 173 aa16.39■□□□□ 0.21
LRP3-201ENST00000253193 ZNF169Q14929 603 aaPredicted RBP16.39■□□□□ 0.21
LRP3-201ENST00000253193 ZNF416Q9BWM5 594 aa16.39■□□□□ 0.21
LRP3-201ENST00000253193 GLS2Q9UI32 602 aa16.39■□□□□ 0.21
LRP3-201ENST00000253193 PCDH15Q96QU1 1955 aa16.39■□□□□ 0.21
LRP3-201ENST00000253193 A0A0A6YYH2 397 aa16.39■□□□□ 0.21
LRP3-201ENST00000253193 A6NJ64 397 aa16.39■□□□□ 0.21
LRP3-201ENST00000253193 BCL2L11O43521 198 aa16.39■□□□□ 0.21
LRP3-201ENST00000253193 MMP16P51512 607 aa16.39■□□□□ 0.21
LRP3-201ENST00000253193 CFHR1Q03591 330 aa16.39■□□□□ 0.21
LRP3-201ENST00000253193 LCN10Q6JVE6 187 aa16.39■□□□□ 0.21
LRP3-201ENST00000253193 RTN4RL2Q86UN3 420 aa16.39■□□□□ 0.21
LRP3-201ENST00000253193 CDC6Q99741 560 aa16.39■□□□□ 0.21
LRP3-201ENST00000253193 TMEM231Q9H6L2 316 aa16.39■□□□□ 0.21
LRP3-201ENST00000253193 UCK1Q9HA47 277 aa16.39■□□□□ 0.21
LRP3-201ENST00000253193 IGHV3-15A0A0B4J1V0 119 aa16.38■□□□□ 0.21
LRP3-201ENST00000253193 F8W036 122 aa16.38■□□□□ 0.21
LRP3-201ENST00000253193 TO15178 435 aa16.38■□□□□ 0.21
LRP3-201ENST00000253193 BPNT1O95861 308 aa16.38■□□□□ 0.21
LRP3-201ENST00000253193 SRFP11831 508 aa16.38■□□□□ 0.21
LRP3-201ENST00000253193 MPGP29372 298 aa16.38■□□□□ 0.21
LRP3-201ENST00000253193 RPL35P42766 123 aaKnown RBP16.38■□□□□ 0.21
LRP3-201ENST00000253193 BLOC1S1P78537 153 aa16.38■□□□□ 0.21
LRP3-201ENST00000253193 DCDP81605 110 aaKnown RBP16.38■□□□□ 0.21
LRP3-201ENST00000253193 ACY1Q03154 408 aa16.38■□□□□ 0.21
LRP3-201ENST00000253193 ANKRD37Q7Z713 158 aa16.38■□□□□ 0.21
LRP3-201ENST00000253193 PIGTQ969N2 578 aa16.38■□□□□ 0.21
LRP3-201ENST00000253193 KCNK17Q96T54 332 aa16.38■□□□□ 0.21
LRP3-201ENST00000253193 HRH4Q9H3N8 390 aa16.38■□□□□ 0.21
LRP3-201ENST00000253193 MLXQ9UH92 298 aa16.38■□□□□ 0.21
LRP3-201ENST00000253193 PHF3Q92576 2039 aaKnown RBP16.38■□□□□ 0.21
LRP3-201ENST00000253193 ADAP1O75689 374 aa16.38■□□□□ 0.21
LRP3-201ENST00000253193 CNR1P21554 472 aa16.38■□□□□ 0.21
LRP3-201ENST00000253193 ZNF260Q3ZCT1 412 aa16.38■□□□□ 0.21
LRP3-201ENST00000253193 THEM4Q5T1C6 240 aa16.38■□□□□ 0.21
LRP3-201ENST00000253193 TMEM156Q8N614 296 aa16.38■□□□□ 0.21
LRP3-201ENST00000253193 SLC22A8Q8TCC7 542 aa16.38■□□□□ 0.21
LRP3-201ENST00000253193 PCDHB16Q9NRJ7 776 aa16.38■□□□□ 0.21
LRP3-201ENST00000253193 PCNX3Q9H6A9 2034 aa16.38■□□□□ 0.21
LRP3-201ENST00000253193 LIPT2A6NK58 231 aa16.38■□□□□ 0.21
LRP3-201ENST00000253193 FSTP19883 344 aa16.38■□□□□ 0.21
LRP3-201ENST00000253193 HAGHLQ6PII5 290 aaPredicted RBP16.38■□□□□ 0.21
LRP3-201ENST00000253193 ARHGAP5-AS1Q96IT6 56 aa16.38■□□□□ 0.21
LRP3-201ENST00000253193 STMND1H3BQB6 276 aa16.37■□□□□ 0.21
LRP3-201ENST00000253193 TMEM225BP0DP42 221 aa16.37■□□□□ 0.21
LRP3-201ENST00000253193 SCRN3Q0VDG4 424 aa16.37■□□□□ 0.21
LRP3-201ENST00000253193 UNC119Q13432 240 aa16.37■□□□□ 0.21
LRP3-201ENST00000253193 DEGS2Q6QHC5 323 aa16.37■□□□□ 0.21
LRP3-201ENST00000253193 HSD17B13Q7Z5P4 300 aaPredicted RBP16.37■□□□□ 0.21
LRP3-201ENST00000253193 ZNF501Q96CX3 271 aaPredicted RBP16.37■□□□□ 0.21
LRP3-201ENST00000253193 PCDHB10Q9UN67 800 aa16.37■□□□□ 0.21
LRP3-201ENST00000253193 NPIPA2E9PIF3 369 aa16.37■□□□□ 0.21
LRP3-201ENST00000253193 NPIPA3F8WFD2 350 aa16.37■□□□□ 0.21
LRP3-201ENST00000253193 SCGNO76038 276 aa16.37■□□□□ 0.21
LRP3-201ENST00000253193 FARS2O95363 451 aaKnown RBP16.37■□□□□ 0.21
LRP3-201ENST00000253193 CASRP41180 1078 aa16.37■□□□□ 0.21
LRP3-201ENST00000253193 MECP2P51608 486 aaKnown RBP16.37■□□□□ 0.21
LRP3-201ENST00000253193 PAN3Q58A45 887 aaKnown RBP16.37■□□□□ 0.21
LRP3-201ENST00000253193 SLC25A42Q86VD7 318 aa16.37■□□□□ 0.21
LRP3-201ENST00000253193 PLEK2Q9NYT0 353 aa16.37■□□□□ 0.21
LRP3-201ENST00000253193 CSTBP04080 98 aaKnown RBP16.37■□□□□ 0.21
LRP3-201ENST00000253193 FCGR2AP12318 317 aa16.37■□□□□ 0.21
LRP3-201ENST00000253193 TPT1P13693 172 aaKnown RBP16.37■□□□□ 0.21
LRP3-201ENST00000253193 IGFBP3P17936 291 aaPredicted RBP16.37■□□□□ 0.21
LRP3-201ENST00000253193 PRSS12P56730 875 aa16.37■□□□□ 0.21
LRP3-201ENST00000253193 KCNRGQ8N5I3 272 aa16.37■□□□□ 0.21
LRP3-201ENST00000253193 SLC38A9Q8NBW4 561 aa16.37■□□□□ 0.21
LRP3-201ENST00000253193 TERB2Q8NHR7 220 aa16.37■□□□□ 0.21
LRP3-201ENST00000253193 LIN37Q96GY3 246 aaPredicted RBP16.37■□□□□ 0.21
LRP3-201ENST00000253193 C14orf166Q9Y224 244 aaKnown RBP16.37■□□□□ 0.21
LRP3-201ENST00000253193 FTCDNL1E5RQL4 147 aa16.36■□□□□ 0.21
LRP3-201ENST00000253193 ZNF813Q6ZN06 617 aa16.36■□□□□ 0.21
LRP3-201ENST00000253193 SLC25A45Q8N413 288 aa16.36■□□□□ 0.21
LRP3-201ENST00000253193 OR1S2Q8NGQ3 325 aa16.36■□□□□ 0.21
LRP3-201ENST00000253193 MED9Q9NWA0 146 aa16.36■□□□□ 0.21
LRP3-201ENST00000253193 RBMXP38159 391 aaKnown RBP16.36■□□□□ 0.21
LRP3-201ENST00000253193 C1orf100Q5SVJ3 147 aa16.36■□□□□ 0.21
LRP3-201ENST00000253193 PTCRAQ6ISU1 281 aaPredicted RBP16.36■□□□□ 0.21
LRP3-201ENST00000253193 FAM166AQ6J272 317 aa16.36■□□□□ 0.21
LRP3-201ENST00000253193 RNF144BQ7Z419 303 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms