RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 HHLA2Q9UM44 414 aa8.98□□□□□ -0.97
COPB1-201ENST00000249923 NCOA6Q14686 2063 aaPredicted RBP8.98□□□□□ -0.97
COPB1-201ENST00000249923 CACNA1EQ15878 2313 aa8.98□□□□□ -0.97
COPB1-201ENST00000249923 CCDC163A0A0D9SF12 145 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 TUBAL3A6NHL2 446 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 NUDT21O43809 227 aaKnown RBP8.97□□□□□ -0.97
COPB1-201ENST00000249923 FGF2P09038 288 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 HOXB5P09067 269 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 VSIG8P0DPA2 414 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 RPA2P15927 270 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 BDKRB2P30411 391 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 ATP1B3P54709 279 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 HNRNPKP61978 463 aaKnown RBP eCLIP8.97□□□□□ -0.97
COPB1-201ENST00000249923 HSF1Q00613 529 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 MPPED2Q15777 294 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 ADAM5Q6NVV9 412 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 ZNF529Q6P280 563 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 ZNF584Q8IVC4 421 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 CCDC107Q8WV48 283 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 GPER1Q99527 375 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 CST11Q9H112 138 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 SLC2A4RGQ9NR83 387 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 LHFPL6Q9Y693 200 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 CPED1A4D0V7 1026 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 RNF222A6NCQ9 220 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 LIPT2A6NK58 231 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 RFPL4AA6NLU0 287 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 ZNF736B4DX44 427 aaPredicted RBP8.97□□□□□ -0.97
COPB1-201ENST00000249923 RFPL4AL1F8VTS6 287 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 SULT1C2O00338 296 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 GDF9O60383 454 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 CD8AP01732 235 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 ACTBP60709 375 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 ACTG1P63261 375 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 SSBP1Q04837 148 aaKnown RBP8.97□□□□□ -0.97
COPB1-201ENST00000249923 ZP4Q12836 540 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 RNASE10Q5GAN6 216 aaKnown RBP8.97□□□□□ -0.97
COPB1-201ENST00000249923 PAPD4Q6PIY7 484 aaKnown RBP8.97□□□□□ -0.97
COPB1-201ENST00000249923 CLEC9AQ6UXN8 241 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 FJX1Q86VR8 437 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 ADAD2Q8NCV1 583 aaKnown RBP8.97□□□□□ -0.97
COPB1-201ENST00000249923 OR5M9Q8NGP3 310 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 OR5M8Q8NGP6 311 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 MAFIPQ8WZ33 124 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 TMEM41AQ96HV5 264 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 C5orf34Q96MH7 638 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 AKIRIN1Q9H9L7 192 aaPredicted RBP8.97□□□□□ -0.97
COPB1-201ENST00000249923 MED9Q9NWA0 146 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 KCNK7Q9Y2U2 307 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 PRELID3BQ9Y3B1 194 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 ANKUB1A6NFN9 424 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 AQP8O94778 261 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 CRABP1P29762 137 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 CDAP32320 146 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 MMP16P51512 607 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 CLDN6P56747 220 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 JMJD6Q6NYC1 403 aaPredicted RBP8.97□□□□□ -0.97
COPB1-201ENST00000249923 H1FNTQ75WM6 255 aaPredicted RBP8.97□□□□□ -0.97
COPB1-201ENST00000249923 ANKRD37Q7Z713 158 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 TMEM104Q8NE00 496 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 PLPP5Q8NEB5 264 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 OR6K3Q8NGY3 331 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 C14orf79Q96F83 325 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 ZNF576Q9H609 170 aa8.97□□□□□ -0.97
COPB1-201ENST00000249923 A0A1W2PP11 408 aa8.96□□□□□ -0.97
COPB1-201ENST00000249923 OR6C76A6NM76 312 aa8.96□□□□□ -0.97
COPB1-201ENST00000249923 LINC01387J3KSC0 135 aa8.96□□□□□ -0.97
COPB1-201ENST00000249923 PMS2P2O95744 297 aa8.96□□□□□ -0.97
COPB1-201ENST00000249923 HPP00738 406 aa8.96□□□□□ -0.97
COPB1-201ENST00000249923 JMJD7P0C870 316 aa8.96□□□□□ -0.97
COPB1-201ENST00000249923 SRFP11831 508 aa8.96□□□□□ -0.97
COPB1-201ENST00000249923 GNB3P16520 340 aa8.96□□□□□ -0.97
COPB1-201ENST00000249923 ZBTB25P24278 435 aa8.96□□□□□ -0.97
COPB1-201ENST00000249923 PPP1R1AQ13522 171 aa8.96□□□□□ -0.97
COPB1-201ENST00000249923 ARFRP1Q13795 201 aa8.96□□□□□ -0.97
COPB1-201ENST00000249923 OR2W3Q7Z3T1 314 aa8.96□□□□□ -0.97
COPB1-201ENST00000249923 NAXDQ8IW45 347 aa8.96□□□□□ -0.97
COPB1-201ENST00000249923 OR10Z1Q8NGY1 313 aa8.96□□□□□ -0.97
COPB1-201ENST00000249923 SLAMF6Q96DU3 332 aa8.96□□□□□ -0.97
COPB1-201ENST00000249923 MRPS24Q96EL2 167 aaKnown RBP8.96□□□□□ -0.97
COPB1-201ENST00000249923 POTEKPQ9BYX7 375 aa8.96□□□□□ -0.97
COPB1-201ENST00000249923 SELENOIQ9C0D9 397 aa8.96□□□□□ -0.97
COPB1-201ENST00000249923 LDAHQ9H6V9 325 aa8.96□□□□□ -0.97
COPB1-201ENST00000249923 SERINC1Q9NRX5 453 aa8.96□□□□□ -0.97
COPB1-201ENST00000249923 B3GALT1Q9Y5Z6 326 aa8.96□□□□□ -0.97
COPB1-201ENST00000249923 ETV2O00321 342 aaPredicted RBP8.96□□□□□ -0.98
COPB1-201ENST00000249923 MTRF1O75570 445 aaKnown RBP8.96□□□□□ -0.98
COPB1-201ENST00000249923 CD2P06729 351 aa8.96□□□□□ -0.98
COPB1-201ENST00000249923 SPP1P10451 314 aa8.96□□□□□ -0.98
COPB1-201ENST00000249923 SLC2A1P11166 492 aa8.96□□□□□ -0.98
COPB1-201ENST00000249923 CD80P33681 288 aa8.96□□□□□ -0.98
COPB1-201ENST00000249923 BIDP55957 195 aa8.96□□□□□ -0.98
COPB1-201ENST00000249923 SRSF4Q08170 494 aaKnown RBP8.96□□□□□ -0.98
COPB1-201ENST00000249923 SNTB1Q13884 538 aaKnown RBP8.96□□□□□ -0.98
COPB1-201ENST00000249923 NKAPLQ5M9Q1 402 aa8.96□□□□□ -0.98
COPB1-201ENST00000249923 ETV3LQ6ZN32 361 aa8.96□□□□□ -0.98
COPB1-201ENST00000249923 OVCH2Q7RTZ1 564 aa8.96□□□□□ -0.98
COPB1-201ENST00000249923 PUSL1Q8N0Z8 303 aaKnown RBP8.96□□□□□ -0.98
COPB1-201ENST00000249923 SVBPQ8N300 66 aa8.96□□□□□ -0.98
COPB1-201ENST00000249923 OR5D18Q8NGL1 313 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms