RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 AWAT2Q6E213 333 aa13.93□□□□□ -0.18
LRFN1-201ENST00000248668 OR52W1Q6IF63 320 aa13.93□□□□□ -0.18
LRFN1-201ENST00000248668 SLC25A47Q6Q0C1 308 aa13.93□□□□□ -0.18
LRFN1-201ENST00000248668 DEGS2Q6QHC5 323 aa13.93□□□□□ -0.18
LRFN1-201ENST00000248668 ZNF837Q96EG3 531 aaPredicted RBP13.93□□□□□ -0.18
LRFN1-201ENST00000248668 GSX2Q9BZM3 304 aa13.93□□□□□ -0.18
LRFN1-201ENST00000248668 ZNF700Q9H0M5 742 aa13.93□□□□□ -0.18
LRFN1-201ENST00000248668 KLK13Q9UKR3 277 aa13.93□□□□□ -0.18
LRFN1-201ENST00000248668 A0A1W2PP11 408 aa13.93□□□□□ -0.18
LRFN1-201ENST00000248668 MEGF11A6BM72 1044 aa13.93□□□□□ -0.18
LRFN1-201ENST00000248668 ZIC3O60481 467 aa13.93□□□□□ -0.18
LRFN1-201ENST00000248668 LIFP15018 202 aa13.93□□□□□ -0.18
LRFN1-201ENST00000248668 GNB3P16520 340 aa13.93□□□□□ -0.18
LRFN1-201ENST00000248668 DLX5P56178 289 aa13.93□□□□□ -0.18
LRFN1-201ENST00000248668 SLC35A1P78382 337 aa13.93□□□□□ -0.18
LRFN1-201ENST00000248668 MC2RQ01718 297 aa13.93□□□□□ -0.18
LRFN1-201ENST00000248668 SCRN3Q0VDG4 424 aa13.93□□□□□ -0.18
LRFN1-201ENST00000248668 UNC119Q13432 240 aa13.93□□□□□ -0.18
LRFN1-201ENST00000248668 TNFAIP8L1Q8WVP5 186 aa13.93□□□□□ -0.18
LRFN1-201ENST00000248668 GPN1Q9HCN4 374 aaPredicted RBP13.93□□□□□ -0.18
LRFN1-201ENST00000248668 NPDC1Q9NQX5 325 aaPredicted RBP13.93□□□□□ -0.18
LRFN1-201ENST00000248668 PISDQ9UG56 409 aa13.93□□□□□ -0.18
LRFN1-201ENST00000248668 HDGFL3Q9Y3E1 203 aa13.93□□□□□ -0.18
LRFN1-201ENST00000248668 WIPF3A6NGB9 483 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 NPIPA2E9PIF3 369 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 NPIPA3F8WFD2 350 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 YKT6O15498 198 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 POU3F2P20265 443 aaPredicted RBP13.92□□□□□ -0.18
LRFN1-201ENST00000248668 CSNK1A1P48729 337 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 SCAND1P57086 179 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 EXT1Q16394 746 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 ZNF626Q68DY1 528 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 C11orf88Q6PI97 169 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 ANGPTL5Q86XS5 388 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 MUC20Q8N307 709 aaPredicted RBP13.92□□□□□ -0.18
LRFN1-201ENST00000248668 GTPBP8Q8N3Z3 284 aaPredicted RBP13.92□□□□□ -0.18
LRFN1-201ENST00000248668 SLC25A43Q8WUT9 341 aaPredicted RBP13.92□□□□□ -0.18
LRFN1-201ENST00000248668 LIN37Q96GY3 246 aaPredicted RBP13.92□□□□□ -0.18
LRFN1-201ENST00000248668 NICN1Q9BSH3 213 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 BANF2Q9H503 90 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 ASPMQ8IZT6 3477 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 FRYQ5TBA9 3013 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 A0A1B0GTI1 187 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 OR5H15A6NDH6 313 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 PRSS44E7EML9 344 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 GOSR2O14653 212 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 CYB5AP00167 134 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 LPLP06858 475 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 STARP49675 285 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 DNM1P46Q6ZS02 220 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 ARRDC1-AS1Q9H2J1 176 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 TAS2R8Q9NYW2 309 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 PIPOXQ9P0Z9 390 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 TNRC6BQ9UPQ9 1833 aaKnown RBP13.92□□□□□ -0.18
LRFN1-201ENST00000248668 LINC00587B1AMM8 73 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 SSX5O60225 188 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 RD3LP0DJH9 198 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 RAB3AP20336 220 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 C21orf62-AS1Q17RA5 79 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 PAQR4Q8N4S7 273 aaPredicted RBP13.92□□□□□ -0.18
LRFN1-201ENST00000248668 OR5D14Q8NGL3 314 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 ZBTB8AQ96BR9 441 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 SELENOIQ9C0D9 397 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 POFUT1Q9H488 388 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 FBXO4Q9UKT5 387 aa13.92□□□□□ -0.18
LRFN1-201ENST00000248668 A0A0J9YW62 118 aa13.91□□□□□ -0.18
LRFN1-201ENST00000248668 hCG_1807616A0A1W2PRN6 198 aa13.91□□□□□ -0.18
LRFN1-201ENST00000248668 HCKP08631 526 aa13.91□□□□□ -0.18
LRFN1-201ENST00000248668 DBHP09172 617 aa13.91□□□□□ -0.18
LRFN1-201ENST00000248668 VSIG8P0DPA2 414 aa13.91□□□□□ -0.18
LRFN1-201ENST00000248668 ZNF93P35789 620 aaPredicted RBP13.91□□□□□ -0.18
LRFN1-201ENST00000248668 RFC3P40938 356 aa13.91□□□□□ -0.18
LRFN1-201ENST00000248668 GUCA1AP43080 201 aaPredicted RBP13.91□□□□□ -0.18
LRFN1-201ENST00000248668 DEFA5Q01523 94 aa13.91□□□□□ -0.18
LRFN1-201ENST00000248668 UBE2QL1A1L167 161 aa13.91□□□□□ -0.18
LRFN1-201ENST00000248668 TRAPPC6AO75865 159 aa13.91□□□□□ -0.18
LRFN1-201ENST00000248668 ZNF35P13682 527 aa13.91□□□□□ -0.18
LRFN1-201ENST00000248668 OR3A4PP47883 348 aa13.91□□□□□ -0.18
LRFN1-201ENST00000248668 CDNFQ49AH0 187 aa13.91□□□□□ -0.18
LRFN1-201ENST00000248668 DCAF12L2Q5VW00 463 aa13.91□□□□□ -0.18
LRFN1-201ENST00000248668 FJX1Q86VR8 437 aa13.91□□□□□ -0.18
LRFN1-201ENST00000248668 ELMOD3Q96FG2 381 aa13.91□□□□□ -0.18
LRFN1-201ENST00000248668 GPER1Q99527 375 aa13.91□□□□□ -0.18
LRFN1-201ENST00000248668 SRXN1Q9BYN0 137 aa13.91□□□□□ -0.18
LRFN1-201ENST00000248668 MAB21L2Q9Y586 359 aa13.91□□□□□ -0.18
LRFN1-201ENST00000248668 M0R233 179 aa13.91□□□□□ -0.18
LRFN1-201ENST00000248668 TLX3O43711 291 aaPredicted RBP13.91□□□□□ -0.18
LRFN1-201ENST00000248668 MPIG6BO95866 241 aa13.91□□□□□ -0.18
LRFN1-201ENST00000248668 RFPL3SP0C7P2 107 aa13.91□□□□□ -0.18
LRFN1-201ENST00000248668 GABRA1P14867 456 aa13.91□□□□□ -0.18
LRFN1-201ENST00000248668 ACTBP60709 375 aa13.91□□□□□ -0.18
LRFN1-201ENST00000248668 ACTG1P63261 375 aa13.91□□□□□ -0.18
LRFN1-201ENST00000248668 Q0VFX4 171 aa13.91□□□□□ -0.18
LRFN1-201ENST00000248668 TRAPPC6BQ86SZ2 158 aa13.91□□□□□ -0.18
LRFN1-201ENST00000248668 TMEM104Q8NE00 496 aa13.91□□□□□ -0.18
LRFN1-201ENST00000248668 MICU1Q9BPX6 476 aa13.91□□□□□ -0.18
LRFN1-201ENST00000248668 ANGPTL4Q9BY76 406 aa13.91□□□□□ -0.18
LRFN1-201ENST00000248668 SHARPINQ9H0F6 387 aa13.91□□□□□ -0.18
LRFN1-201ENST00000248668 CACNA1HO95180 2353 aa13.9□□□□□ -0.18
LRFN1-201ENST00000248668 DNAJC13O75165 2243 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms