RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 PADI1Q9ULC6 663 aa18.27■□□□□ 0.51
SNX3-201ENST00000230085 MKL2Q9ULH7 1088 aa18.27■□□□□ 0.51
SNX3-201ENST00000230085 R4GMQ9 66 aa18.27■□□□□ 0.51
SNX3-201ENST00000230085 F5H0A9 414 aaPredicted RBP18.26■□□□□ 0.51
SNX3-201ENST00000230085 OIP5O43482 229 aa18.26■□□□□ 0.51
SNX3-201ENST00000230085 TLX3O43711 291 aaPredicted RBP18.26■□□□□ 0.51
SNX3-201ENST00000230085 NSA2O95478 260 aaKnown RBP18.26■□□□□ 0.51
SNX3-201ENST00000230085 PSMB6P28072 239 aa18.26■□□□□ 0.51
SNX3-201ENST00000230085 RPL27P61353 136 aaKnown RBP18.26■□□□□ 0.51
SNX3-201ENST00000230085 BTG2P78543 158 aa18.26■□□□□ 0.51
SNX3-201ENST00000230085 PPP1R1AQ13522 171 aa18.26■□□□□ 0.51
SNX3-201ENST00000230085 ZNF704Q6ZNC4 412 aaPredicted RBP18.26■□□□□ 0.51
SNX3-201ENST00000230085 ZNF627Q7L945 461 aa18.26■□□□□ 0.51
SNX3-201ENST00000230085 GTPBP8Q8N3Z3 284 aaPredicted RBP18.26■□□□□ 0.51
SNX3-201ENST00000230085 PLPP7Q8NBV4 271 aa18.26■□□□□ 0.51
SNX3-201ENST00000230085 OR4K17Q8NGC6 315 aa18.26■□□□□ 0.51
SNX3-201ENST00000230085 MR1Q95460 341 aa18.26■□□□□ 0.51
SNX3-201ENST00000230085 NKD1Q969G9 470 aa18.26■□□□□ 0.51
SNX3-201ENST00000230085 MVB12AQ96EY5 273 aa18.26■□□□□ 0.51
SNX3-201ENST00000230085 KCNK15Q9H427 330 aa18.26■□□□□ 0.51
SNX3-201ENST00000230085 SLC22A11Q9NSA0 550 aa18.26■□□□□ 0.51
SNX3-201ENST00000230085 TAS2R4Q9NYW5 299 aa18.26■□□□□ 0.51
SNX3-201ENST00000230085 H7C1C5 153 aa18.25■□□□□ 0.51
SNX3-201ENST00000230085 RAB27BO00194 218 aa18.25■□□□□ 0.51
SNX3-201ENST00000230085 GPR31O00270 319 aa18.25■□□□□ 0.51
SNX3-201ENST00000230085 SCDO00767 359 aa18.25■□□□□ 0.51
SNX3-201ENST00000230085 EFSO43281 561 aa18.25■□□□□ 0.51
SNX3-201ENST00000230085 FOLR2P14207 255 aa18.25■□□□□ 0.51
SNX3-201ENST00000230085 NR0B1P51843 470 aaKnown RBP18.25■□□□□ 0.51
SNX3-201ENST00000230085 LCN6P62502 163 aa18.25■□□□□ 0.51
SNX3-201ENST00000230085 ADAM8P78325 824 aa18.25■□□□□ 0.51
SNX3-201ENST00000230085 NKAIN1Q4KMZ8 207 aa18.25■□□□□ 0.51
SNX3-201ENST00000230085 LRRC69Q6ZNQ3 347 aa18.25■□□□□ 0.51
SNX3-201ENST00000230085 MAMDC2Q7Z304 686 aaPredicted RBP18.25■□□□□ 0.51
SNX3-201ENST00000230085 BAP18Q8IXM2 172 aa18.25■□□□□ 0.51
SNX3-201ENST00000230085 SLC25A44Q96H78 314 aaPredicted RBP18.25■□□□□ 0.51
SNX3-201ENST00000230085 TXNIPQ9H3M7 391 aa18.25■□□□□ 0.51
SNX3-201ENST00000230085 ZNF304Q9HCX3 659 aa18.25■□□□□ 0.51
SNX3-201ENST00000230085 MBD2Q9UBB5 411 aa18.25■□□□□ 0.51
SNX3-201ENST00000230085 GDF2Q9UK05 429 aaPredicted RBP18.25■□□□□ 0.51
SNX3-201ENST00000230085 SLC22A13Q9Y226 551 aa18.25■□□□□ 0.51
SNX3-201ENST00000230085 APC2O95996 2303 aa18.25■□□□□ 0.51
SNX3-201ENST00000230085 ACACAQ13085 2346 aa18.25■□□□□ 0.51
SNX3-201ENST00000230085 A0A1W2PQD3 144 aa18.25■□□□□ 0.51
SNX3-201ENST00000230085 OR2AT4A6NND4 320 aa18.25■□□□□ 0.51
SNX3-201ENST00000230085 PVALBP20472 110 aaPredicted RBP18.25■□□□□ 0.51
SNX3-201ENST00000230085 TOMM34Q15785 309 aaPredicted RBP18.25■□□□□ 0.51
SNX3-201ENST00000230085 CORO6Q6QEF8 472 aa18.25■□□□□ 0.51
SNX3-201ENST00000230085 OR52N5Q8NH56 324 aa18.25■□□□□ 0.51
SNX3-201ENST00000230085 LMF1Q96S06 567 aa18.25■□□□□ 0.51
SNX3-201ENST00000230085 UQCC2Q9BRT2 126 aa18.25■□□□□ 0.51
SNX3-201ENST00000230085 RNF122Q9H9V4 155 aa18.25■□□□□ 0.51
SNX3-201ENST00000230085 ZFP57Q9NU63 452 aa18.25■□□□□ 0.51
SNX3-201ENST00000230085 DKK4Q9UBT3 224 aa18.25■□□□□ 0.51
SNX3-201ENST00000230085 ZNF208O43345 1280 aa18.24■□□□□ 0.51
SNX3-201ENST00000230085 NPIPB7O75200 414 aa18.24■□□□□ 0.51
SNX3-201ENST00000230085 BPNT1O95861 308 aa18.24■□□□□ 0.51
SNX3-201ENST00000230085 APOC1P02654 83 aa18.24■□□□□ 0.51
SNX3-201ENST00000230085 LIPCP11150 499 aa18.24■□□□□ 0.51
SNX3-201ENST00000230085 HSD11B1P28845 292 aa18.24■□□□□ 0.51
SNX3-201ENST00000230085 IL13RA1P78552 427 aa18.24■□□□□ 0.51
SNX3-201ENST00000230085 QRFPP83859 136 aa18.24■□□□□ 0.51
SNX3-201ENST00000230085 MFGE8Q08431 387 aaPredicted RBP18.24■□□□□ 0.51
SNX3-201ENST00000230085 NKAPLQ5M9Q1 402 aa18.24■□□□□ 0.51
SNX3-201ENST00000230085 NSUN5P2Q63ZY6 315 aa18.24■□□□□ 0.51
SNX3-201ENST00000230085 IL22RA1Q8N6P7 574 aa18.24■□□□□ 0.51
SNX3-201ENST00000230085 OR6S1Q8NH40 331 aa18.24■□□□□ 0.51
SNX3-201ENST00000230085 CNTNAP3BQ96NU0 1288 aa18.24■□□□□ 0.51
SNX3-201ENST00000230085 CYTL1Q9NRR1 136 aa18.24■□□□□ 0.51
SNX3-201ENST00000230085 H0YIG0 161 aa18.23■□□□□ 0.51
SNX3-201ENST00000230085 ACTL6AO96019 429 aa18.23■□□□□ 0.51
SNX3-201ENST00000230085 FBXO45P0C2W1 286 aa18.23■□□□□ 0.51
SNX3-201ENST00000230085 FAM157CP0CG43 387 aa18.23■□□□□ 0.51
SNX3-201ENST00000230085 ABOP16442 354 aa18.23■□□□□ 0.51
SNX3-201ENST00000230085 TCN2P20062 427 aa18.23■□□□□ 0.51
SNX3-201ENST00000230085 PJVKQ0ZLH3 352 aa18.23■□□□□ 0.51
SNX3-201ENST00000230085 TSC22D1Q15714 1073 aa18.23■□□□□ 0.51
SNX3-201ENST00000230085 TMEM244Q5VVB8 128 aa18.23■□□□□ 0.51
SNX3-201ENST00000230085 CBLN3Q6UW01 205 aa18.23■□□□□ 0.51
SNX3-201ENST00000230085 C5orf46Q6UWT4 87 aa18.23■□□□□ 0.51
SNX3-201ENST00000230085 UNQ6494/PRO21346Q6UXR6 183 aa18.23■□□□□ 0.51
SNX3-201ENST00000230085 COX15Q7KZN9 410 aa18.23■□□□□ 0.51
SNX3-201ENST00000230085 PHOSPHO1Q8TCT1 267 aa18.23■□□□□ 0.51
SNX3-201ENST00000230085 GLYATL2Q8WU03 294 aa18.23■□□□□ 0.51
SNX3-201ENST00000230085 ABHD6Q9BV23 337 aa18.23■□□□□ 0.51
SNX3-201ENST00000230085 CHMP1AQ9HD42 196 aaPredicted RBP18.23■□□□□ 0.51
SNX3-201ENST00000230085 ASF1BQ9NVP2 202 aa18.23■□□□□ 0.51
SNX3-201ENST00000230085 CTSFQ9UBX1 484 aa18.23■□□□□ 0.51
SNX3-201ENST00000230085 LRP12Q9Y561 859 aa18.23■□□□□ 0.51
SNX3-201ENST00000230085 LOC400499M0QZD8 3231 aa18.23■□□□□ 0.51
SNX3-201ENST00000230085 CHD8Q9HCK8 2581 aa18.22■□□□□ 0.51
SNX3-201ENST00000230085 LOC101059948A0A1B0GTJ6 334 aa18.22■□□□□ 0.51
SNX3-201ENST00000230085 WIPF3A6NGB9 483 aa18.22■□□□□ 0.51
SNX3-201ENST00000230085 FRG2CA6NGY1 282 aa18.22■□□□□ 0.51
SNX3-201ENST00000230085 NPIPB13A6NJU9 1138 aa18.22■□□□□ 0.51
SNX3-201ENST00000230085 NPIPB4C9JG80 1138 aa18.22■□□□□ 0.51
SNX3-201ENST00000230085 F8W036 122 aa18.22■□□□□ 0.51
SNX3-201ENST00000230085 UTS2O95399 124 aa18.22■□□□□ 0.51
SNX3-201ENST00000230085 CRABP1P29762 137 aa18.22■□□□□ 0.51
SNX3-201ENST00000230085 FOXL2P58012 376 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms