RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 UBE3DQ7Z6J8 389 aa13.13□□□□□ -0.31
PTPRA-201ENST00000216877 GATSQ8NAP1 163 aa13.13□□□□□ -0.31
PTPRA-201ENST00000216877 C2orf50Q96LR7 162 aa13.13□□□□□ -0.31
PTPRA-201ENST00000216877 GPR173Q9NS66 373 aa13.13□□□□□ -0.31
PTPRA-201ENST00000216877 LOC102724200A0A096LPH7 203 aaPredicted RBP13.13□□□□□ -0.31
PTPRA-201ENST00000216877 LATO43561 262 aa13.13□□□□□ -0.31
PTPRA-201ENST00000216877 MPZP25189 248 aa13.13□□□□□ -0.31
PTPRA-201ENST00000216877 PNLIPRP3Q17RR3 467 aa13.13□□□□□ -0.31
PTPRA-201ENST00000216877 FAM78AQ5JUQ0 283 aa13.13□□□□□ -0.31
PTPRA-201ENST00000216877 PRAMEF8Q5VWM4 474 aa13.13□□□□□ -0.31
PTPRA-201ENST00000216877 PRAMEF7Q5VXH5 474 aa13.13□□□□□ -0.31
PTPRA-201ENST00000216877 CYB5D2Q8WUJ1 264 aa13.13□□□□□ -0.31
PTPRA-201ENST00000216877 SPACA5Q96QH8 159 aa13.13□□□□□ -0.31
PTPRA-201ENST00000216877 STACQ99469 402 aa13.13□□□□□ -0.31
PTPRA-201ENST00000216877 SDF2Q99470 211 aa13.13□□□□□ -0.31
PTPRA-201ENST00000216877 WDR76Q9H967 626 aa13.13□□□□□ -0.31
PTPRA-201ENST00000216877 WASP42768 502 aa13.13□□□□□ -0.31
PTPRA-201ENST00000216877 TM4SF4P48230 202 aa13.13□□□□□ -0.31
PTPRA-201ENST00000216877 CTXN1P60606 82 aa13.13□□□□□ -0.31
PTPRA-201ENST00000216877 TMEM128Q5BJH2 165 aa13.13□□□□□ -0.31
PTPRA-201ENST00000216877 SSX7Q7RTT5 188 aa13.13□□□□□ -0.31
PTPRA-201ENST00000216877 C5orf24Q7Z6I8 188 aa13.13□□□□□ -0.31
PTPRA-201ENST00000216877 MARCH3Q86UD3 253 aa13.13□□□□□ -0.31
PTPRA-201ENST00000216877 ADIPOR2Q86V24 386 aa13.13□□□□□ -0.31
PTPRA-201ENST00000216877 COMMD2Q86X83 199 aa13.13□□□□□ -0.31
PTPRA-201ENST00000216877 DIRC2Q96SL1 478 aa13.13□□□□□ -0.31
PTPRA-201ENST00000216877 MFRPQ9BY79 579 aa13.13□□□□□ -0.31
PTPRA-201ENST00000216877 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.13□□□□□ -0.31
PTPRA-201ENST00000216877 TM7SF3Q9NS93 570 aa13.13□□□□□ -0.31
PTPRA-201ENST00000216877 SEMA5BQ9P283 1151 aa13.13□□□□□ -0.31
PTPRA-201ENST00000216877 RFNGQ9Y644 331 aa13.13□□□□□ -0.31
PTPRA-201ENST00000216877 TAAR5O14804 337 aa13.12□□□□□ -0.31
PTPRA-201ENST00000216877 TMEM11P17152 192 aa13.12□□□□□ -0.31
PTPRA-201ENST00000216877 PRLHRP49683 370 aa13.12□□□□□ -0.31
PTPRA-201ENST00000216877 RAB11AP62491 216 aa13.12□□□□□ -0.31
PTPRA-201ENST00000216877 CST9LP1Q5W188 147 aa13.12□□□□□ -0.31
PTPRA-201ENST00000216877 VHLLQ6RSH7 139 aa13.12□□□□□ -0.31
PTPRA-201ENST00000216877 OR5T1Q8NG75 326 aa13.12□□□□□ -0.31
PTPRA-201ENST00000216877 EXTL1Q92935 676 aa13.12□□□□□ -0.31
PTPRA-201ENST00000216877 ERGIC1Q969X5 290 aa13.12□□□□□ -0.31
PTPRA-201ENST00000216877 RBM18Q96H35 190 aaKnown RBP13.12□□□□□ -0.31
PTPRA-201ENST00000216877 OR51B6Q9H340 312 aa13.12□□□□□ -0.31
PTPRA-201ENST00000216877 FLVCR1Q9Y5Y0 555 aa13.12□□□□□ -0.31
PTPRA-201ENST00000216877 MKRN2OSH3BPM6 223 aa13.12□□□□□ -0.31
PTPRA-201ENST00000216877 K7ESM1 405 aa13.12□□□□□ -0.31
PTPRA-201ENST00000216877 IFNA21P01568 189 aa13.12□□□□□ -0.31
PTPRA-201ENST00000216877 ALOX5APP20292 161 aa13.12□□□□□ -0.31
PTPRA-201ENST00000216877 TDGF1P3P51864 188 aa13.12□□□□□ -0.31
PTPRA-201ENST00000216877 MEP1BQ16820 701 aa13.12□□□□□ -0.31
PTPRA-201ENST00000216877 TRMT12Q53H54 448 aaKnown RBP13.12□□□□□ -0.31
PTPRA-201ENST00000216877 ZNF66Q6ZN08 573 aa13.12□□□□□ -0.31
PTPRA-201ENST00000216877 C11orf42Q8N5U0 333 aa13.12□□□□□ -0.31
PTPRA-201ENST00000216877 CYB561D1Q8N8Q1 229 aa13.12□□□□□ -0.31
PTPRA-201ENST00000216877 GNRHR2Q96P88 292 aa13.12□□□□□ -0.31
PTPRA-201ENST00000216877 TRIM2Q9C040 744 aa13.12□□□□□ -0.31
PTPRA-201ENST00000216877 MRPS18BQ9Y676 258 aaKnown RBP13.12□□□□□ -0.31
PTPRA-201ENST00000216877 BCAT2O15382 392 aaPredicted RBP13.12□□□□□ -0.31
PTPRA-201ENST00000216877 CRTAPO75718 401 aaPredicted RBP13.12□□□□□ -0.31
PTPRA-201ENST00000216877 AMBPP02760 352 aa13.12□□□□□ -0.31
PTPRA-201ENST00000216877 HKR1P10072 659 aa13.12□□□□□ -0.31
PTPRA-201ENST00000216877 CD81P60033 236 aa13.12□□□□□ -0.31
PTPRA-201ENST00000216877 WDR38Q5JTN6 314 aa13.12□□□□□ -0.31
PTPRA-201ENST00000216877 TMEM31Q5JXX7 168 aa13.12□□□□□ -0.31
PTPRA-201ENST00000216877 SAPCD1Q5SSQ6 148 aa13.12□□□□□ -0.31
PTPRA-201ENST00000216877 WDR25Q64LD2 544 aaPredicted RBP13.12□□□□□ -0.31
PTPRA-201ENST00000216877 FNDC9Q8TBE3 224 aa13.12□□□□□ -0.31
PTPRA-201ENST00000216877 LPAR4Q99677 370 aa13.12□□□□□ -0.31
PTPRA-201ENST00000216877 SLCO5A1Q9H2Y9 848 aa13.12□□□□□ -0.31
PTPRA-201ENST00000216877 A6NIZ1 184 aa13.11□□□□□ -0.31
PTPRA-201ENST00000216877 OR4C45A6NMZ5 311 aa13.11□□□□□ -0.31
PTPRA-201ENST00000216877 IFNL4K9M1U5 179 aa13.11□□□□□ -0.31
PTPRA-201ENST00000216877 HIST1H1TP22492 207 aaPredicted RBP13.11□□□□□ -0.31
PTPRA-201ENST00000216877 TAS2R31P59538 309 aa13.11□□□□□ -0.31
PTPRA-201ENST00000216877 RAP1BP61224 184 aa13.11□□□□□ -0.31
PTPRA-201ENST00000216877 EXOSC7Q15024 291 aaKnown RBP13.11□□□□□ -0.31
PTPRA-201ENST00000216877 ANKRD55Q3KP44 614 aa13.11□□□□□ -0.31
PTPRA-201ENST00000216877 TCEAL5Q5H9L2 206 aa13.11□□□□□ -0.31
PTPRA-201ENST00000216877 YAF2Q8IY57 180 aa13.11□□□□□ -0.31
PTPRA-201ENST00000216877 AQP10Q96PS8 301 aa13.11□□□□□ -0.31
PTPRA-201ENST00000216877 VPS25Q9BRG1 176 aa13.11□□□□□ -0.31
PTPRA-201ENST00000216877 MTIF3Q9H2K0 278 aaKnown RBP13.11□□□□□ -0.31
PTPRA-201ENST00000216877 DNAJC4Q9NNZ3 241 aa13.11□□□□□ -0.31
PTPRA-201ENST00000216877 PITPNC1Q9UKF7 332 aa13.11□□□□□ -0.31
PTPRA-201ENST00000216877 STARD10Q9Y365 291 aa13.11□□□□□ -0.31
PTPRA-201ENST00000216877 CCDC85CA6NKD9 419 aa13.11□□□□□ -0.31
PTPRA-201ENST00000216877 TMEM212A6NML5 194 aa13.11□□□□□ -0.31
PTPRA-201ENST00000216877 FAM157AC9JC47 383 aa13.11□□□□□ -0.31
PTPRA-201ENST00000216877 C11orf98E9PRG8 122 aa13.11□□□□□ -0.31
PTPRA-201ENST00000216877 C8AP07357 584 aa13.11□□□□□ -0.31
PTPRA-201ENST00000216877 AADACL3Q5VUY0 350 aa13.11□□□□□ -0.31
PTPRA-201ENST00000216877 OPN5Q6U736 354 aa13.11□□□□□ -0.31
PTPRA-201ENST00000216877 TMEFF1Q8IYR6 380 aa13.11□□□□□ -0.31
PTPRA-201ENST00000216877 TRAM1L1Q8N609 369 aa13.11□□□□□ -0.31
PTPRA-201ENST00000216877 OR13C3Q8NGS6 347 aa13.11□□□□□ -0.31
PTPRA-201ENST00000216877 MARCH5Q9NX47 278 aa13.11□□□□□ -0.31
PTPRA-201ENST00000216877 OR51B4Q9Y5P0 310 aa13.11□□□□□ -0.31
PTPRA-201ENST00000216877 TOX3O15405 576 aaPredicted RBP13.11□□□□□ -0.31
PTPRA-201ENST00000216877 SYT7O43581 403 aa13.11□□□□□ -0.31
PTPRA-201ENST00000216877 AMY2BP19961 511 aa13.11□□□□□ -0.31
PTPRA-201ENST00000216877 PPM1AP35813 382 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms