RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 PRF1P14222 555 aa12.52□□□□□ -0.41
RTFDC1-201ENST00000023939 EIF2B2P49770 351 aaKnown RBP12.52□□□□□ -0.41
RTFDC1-201ENST00000023939 PSG4Q00888 419 aa12.52□□□□□ -0.41
RTFDC1-201ENST00000023939 RAB12Q6IQ22 244 aa12.52□□□□□ -0.41
RTFDC1-201ENST00000023939 ZNF774Q6NX45 483 aa12.52□□□□□ -0.41
RTFDC1-201ENST00000023939 SKA3Q8IX90 412 aa12.52□□□□□ -0.41
RTFDC1-201ENST00000023939 PP6455Q8WZ26 134 aa12.52□□□□□ -0.41
RTFDC1-201ENST00000023939 SLC7A6Q92536 515 aa12.52□□□□□ -0.41
RTFDC1-201ENST00000023939 NUDT16L1Q9BRJ7 211 aaKnown RBP12.52□□□□□ -0.41
RTFDC1-201ENST00000023939 CACNG6Q9BXT2 260 aa12.52□□□□□ -0.41
RTFDC1-201ENST00000023939 DEFB127Q9H1M4 99 aa12.52□□□□□ -0.41
RTFDC1-201ENST00000023939 KCNK15Q9H427 330 aa12.52□□□□□ -0.41
RTFDC1-201ENST00000023939 LDAHQ9H6V9 325 aa12.52□□□□□ -0.41
RTFDC1-201ENST00000023939 SCPEP1Q9HB40 452 aa12.52□□□□□ -0.41
RTFDC1-201ENST00000023939 HRASLSQ9HDD0 168 aa12.52□□□□□ -0.41
RTFDC1-201ENST00000023939 SPRR3Q9UBC9 169 aa12.52□□□□□ -0.41
RTFDC1-201ENST00000023939 KLK11Q9UBX7 282 aa12.52□□□□□ -0.41
RTFDC1-201ENST00000023939 N6AMT1Q9Y5N5 214 aa12.52□□□□□ -0.41
RTFDC1-201ENST00000023939 TRAV18A0A075B6X5 111 aa12.51□□□□□ -0.41
RTFDC1-201ENST00000023939 ZNF587BE7ETH6 402 aa12.51□□□□□ -0.41
RTFDC1-201ENST00000023939 SCGNO76038 276 aa12.51□□□□□ -0.41
RTFDC1-201ENST00000023939 KDM4BO94953 1096 aa12.51□□□□□ -0.41
RTFDC1-201ENST00000023939 DBHP09172 617 aa12.51□□□□□ -0.41
RTFDC1-201ENST00000023939 ZNF93P35789 620 aaPredicted RBP12.51□□□□□ -0.41
RTFDC1-201ENST00000023939 PLA2G5P39877 138 aa12.51□□□□□ -0.41
RTFDC1-201ENST00000023939 MTFR2Q6P444 385 aa12.51□□□□□ -0.41
RTFDC1-201ENST00000023939 BTN2A1Q7KYR7 527 aa12.51□□□□□ -0.41
RTFDC1-201ENST00000023939 OR2W3Q7Z3T1 314 aa12.51□□□□□ -0.41
RTFDC1-201ENST00000023939 GCDHQ92947 438 aaPredicted RBP12.51□□□□□ -0.41
RTFDC1-201ENST00000023939 APH1AQ96BI3 265 aa12.51□□□□□ -0.41
RTFDC1-201ENST00000023939 SGK3Q96BR1 496 aa12.51□□□□□ -0.41
RTFDC1-201ENST00000023939 ACTR6Q9GZN1 396 aa12.51□□□□□ -0.41
RTFDC1-201ENST00000023939 RGCCQ9H4X1 137 aa12.51□□□□□ -0.41
RTFDC1-201ENST00000023939 CALHM2Q9HA72 323 aa12.51□□□□□ -0.41
RTFDC1-201ENST00000023939 ALG5Q9Y673 324 aa12.51□□□□□ -0.41
RTFDC1-201ENST00000023939 C7orf66A4D0T2 115 aa12.51□□□□□ -0.41
RTFDC1-201ENST00000023939 METTL21EPA6NDL7 271 aa12.51□□□□□ -0.41
RTFDC1-201ENST00000023939 RBBP9O75884 186 aa12.51□□□□□ -0.41
RTFDC1-201ENST00000023939 FCGR2AP12318 317 aa12.51□□□□□ -0.41
RTFDC1-201ENST00000023939 GIFP27352 417 aa12.51□□□□□ -0.41
RTFDC1-201ENST00000023939 PRSS3P35030 304 aa12.51□□□□□ -0.41
RTFDC1-201ENST00000023939 GSK3AP49840 483 aa12.51□□□□□ -0.41
RTFDC1-201ENST00000023939 ARF1P84077 181 aaKnown RBP12.51□□□□□ -0.41
RTFDC1-201ENST00000023939 MCEMP1Q8IX19 187 aa12.51□□□□□ -0.41
RTFDC1-201ENST00000023939 PAQR4Q8N4S7 273 aaPredicted RBP12.51□□□□□ -0.41
RTFDC1-201ENST00000023939 GPX8Q8TED1 209 aa12.51□□□□□ -0.41
RTFDC1-201ENST00000023939 ST6GAL2Q96JF0 529 aa12.51□□□□□ -0.41
RTFDC1-201ENST00000023939 CHST5Q9GZS9 411 aa12.51□□□□□ -0.41
RTFDC1-201ENST00000023939 ZNF224Q9NZL3 707 aa12.51□□□□□ -0.41
RTFDC1-201ENST00000023939 CSAG2Q9Y5P2 127 aa12.51□□□□□ -0.41
RTFDC1-201ENST00000023939 IGKV1-9A0A0C4DH69 117 aa12.5□□□□□ -0.41
RTFDC1-201ENST00000023939 TMEM14DPA8MWL7 114 aa12.5□□□□□ -0.41
RTFDC1-201ENST00000023939 DHFRP00374 187 aa12.5□□□□□ -0.41
RTFDC1-201ENST00000023939 MT-ND4P03905 459 aa12.5□□□□□ -0.41
RTFDC1-201ENST00000023939 CSF1P09603 554 aa12.5□□□□□ -0.41
RTFDC1-201ENST00000023939 UBBP0CG47 229 aa12.5□□□□□ -0.41
RTFDC1-201ENST00000023939 VSIG8P0DPA2 414 aa12.5□□□□□ -0.41
RTFDC1-201ENST00000023939 ALDH3B1P43353 468 aa12.5□□□□□ -0.41
RTFDC1-201ENST00000023939 HTR5AP47898 357 aa12.5□□□□□ -0.41
RTFDC1-201ENST00000023939 FGFBP3Q8TAT2 258 aa12.5□□□□□ -0.41
RTFDC1-201ENST00000023939 NKX3-1Q99801 234 aaPredicted RBP12.5□□□□□ -0.41
RTFDC1-201ENST00000023939 PRDM14Q9GZV8 571 aa12.5□□□□□ -0.41
RTFDC1-201ENST00000023939 NUDT15Q9NV35 164 aa12.5□□□□□ -0.41
RTFDC1-201ENST00000023939 ZNF107Q9UII5 783 aaPredicted RBP12.5□□□□□ -0.41
RTFDC1-201ENST00000023939 KCNMB2Q9Y691 235 aa12.5□□□□□ -0.41
RTFDC1-201ENST00000023939 COX5BP10606 129 aa12.49□□□□□ -0.41
RTFDC1-201ENST00000023939 PTHLHP12272 177 aa12.49□□□□□ -0.41
RTFDC1-201ENST00000023939 ZNF24P17028 368 aa12.49□□□□□ -0.41
RTFDC1-201ENST00000023939 HGFACQ04756 655 aa12.49□□□□□ -0.41
RTFDC1-201ENST00000023939 PMPCAQ10713 525 aa12.49□□□□□ -0.41
RTFDC1-201ENST00000023939 UNC119Q13432 240 aa12.49□□□□□ -0.41
RTFDC1-201ENST00000023939 FAM189A2Q15884 450 aa12.49□□□□□ -0.41
RTFDC1-201ENST00000023939 C3AR1Q16581 482 aa12.49□□□□□ -0.41
RTFDC1-201ENST00000023939 DEFB109BQ30KR1 87 aa12.49□□□□□ -0.41
RTFDC1-201ENST00000023939 GFOD2Q3B7J2 385 aa12.49□□□□□ -0.41
RTFDC1-201ENST00000023939 SNAI3Q3KNW1 292 aa12.49□□□□□ -0.41
RTFDC1-201ENST00000023939 ASCL5Q7RTU5 278 aa12.49□□□□□ -0.41
RTFDC1-201ENST00000023939 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.49□□□□□ -0.41
RTFDC1-201ENST00000023939 DPPA2Q7Z7J5 298 aa12.49□□□□□ -0.41
RTFDC1-201ENST00000023939 ANGPTL5Q86XS5 388 aa12.49□□□□□ -0.41
RTFDC1-201ENST00000023939 OR56B4Q8NH76 319 aa12.49□□□□□ -0.41
RTFDC1-201ENST00000023939 AKR7LQ8NHP1 331 aa12.49□□□□□ -0.41
RTFDC1-201ENST00000023939 UBASH3BQ8TF42 649 aa12.49□□□□□ -0.41
RTFDC1-201ENST00000023939 FAM46BQ96A09 425 aa12.49□□□□□ -0.41
RTFDC1-201ENST00000023939 C1orf147Q96MC9 270 aaPredicted RBP12.49□□□□□ -0.41
RTFDC1-201ENST00000023939 GLRX2Q9NS18 164 aa12.49□□□□□ -0.41
RTFDC1-201ENST00000023939 GHRLQ9UBU3 117 aa12.49□□□□□ -0.41
RTFDC1-201ENST00000023939 ZNF221Q9UK13 617 aa12.49□□□□□ -0.41
RTFDC1-201ENST00000023939 SLC22A20A6NK97 555 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 RAB27BO00194 218 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 GMDSO60547 372 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 IGHV3-9P01782 118 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 LPLP06858 475 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 PATE4P0C8F1 98 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 FAUP35544 74 aaKnown RBP12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 TBRG1Q3YBR2 411 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 SFRP5Q5T4F7 317 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 IGFL3Q6UXB1 125 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 COLCA1Q6ZS62 124 aa12.48□□□□□ -0.41
RTFDC1-201ENST00000023939 ZNF100Q8IYN0 542 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms