RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 NMD3Q96D46 503 aaKnown RBP8.54□□□□□ -1.04
PHGDH-222ENST00000641587 TMEM80Q96HE8 168 aa8.54□□□□□ -1.04
PHGDH-222ENST00000641587 TMPRSS13Q9BYE2 586 aa8.54□□□□□ -1.04
PHGDH-222ENST00000641587 ZNF696Q9H7X3 374 aa8.54□□□□□ -1.04
PHGDH-222ENST00000641587 ADGRL4Q9HBW9 690 aa8.54□□□□□ -1.04
PHGDH-222ENST00000641587 MOV10Q9HCE1 1003 aaKnown RBP8.54□□□□□ -1.04
PHGDH-222ENST00000641587 EMC7Q9NPA0 242 aa8.54□□□□□ -1.04
PHGDH-222ENST00000641587 G6PC2Q9NQR9 355 aa8.54□□□□□ -1.04
PHGDH-222ENST00000641587 PAK1IP1Q9NWT1 392 aaPredicted RBP8.54□□□□□ -1.04
PHGDH-222ENST00000641587 ZNF224Q9NZL3 707 aa8.54□□□□□ -1.04
PHGDH-222ENST00000641587 PCDHGB1Q9Y5G3 927 aa8.54□□□□□ -1.04
PHGDH-222ENST00000641587 A0A087WXM4 84 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 DAPL1A0PJW8 107 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 C12orf71A8MTZ7 269 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 ZNF670-ZNF695F2Z2N8 137 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 TMPRSS2O15393 492 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 CDC14BO60729 498 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 MPZL1O95297 269 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 MT-ND2P03891 347 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 CDK1P06493 297 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 SBK2P0C263 348 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 PATE4P0C8F1 98 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 B4GALT1P15291 398 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 ATP6V1B1P15313 513 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 MSR1P21757 451 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 SLC15A1P46059 708 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 ENTPD1P49961 510 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 ACTC1P68032 377 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 ACTA1P68133 377 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 MVKQ03426 396 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 HSF2Q03933 536 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 GSG1Q2KHT4 349 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 ZNF773Q6PK81 442 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 ZNF813Q6ZN06 617 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 USP43Q70EL4 1123 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 SLC16A9Q7RTY1 509 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 SVOPQ8N4V2 548 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 ZDHHC22Q8N966 263 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 SLC26A10Q8NG04 563 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 C11orf40Q8WZ69 217 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 FOXB1Q99853 325 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 CDADC1Q9BWV3 514 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 C1QTNF5Q9BXJ0 243 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 TTTY10Q9BZA0 68 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 WDR76Q9H967 626 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 VCX3AQ9NNX9 186 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 POLE4Q9NR33 117 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 FKBP14Q9NWM8 211 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 HAO2Q9NYQ3 351 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 DUSP13Q9UII6 198 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 UGT2A1Q9Y4X1 527 aa8.53□□□□□ -1.04
PHGDH-222ENST00000641587 TRAV20A0A0B4J274 112 aa8.52□□□□□ -1.05
PHGDH-222ENST00000641587 A0A1W2PPW3 197 aa8.52□□□□□ -1.05
PHGDH-222ENST00000641587 ZNF593O00488 134 aaPredicted RBP8.52□□□□□ -1.05
PHGDH-222ENST00000641587 MYL12BO14950 172 aa8.52□□□□□ -1.05
PHGDH-222ENST00000641587 PLPP2O43688 288 aa8.52□□□□□ -1.05
PHGDH-222ENST00000641587 FARS2O95363 451 aaKnown RBP8.52□□□□□ -1.05
PHGDH-222ENST00000641587 CLPTM1O96005 669 aa8.52□□□□□ -1.05
PHGDH-222ENST00000641587 DCKP27707 260 aa8.52□□□□□ -1.05
PHGDH-222ENST00000641587 C21orf33P30042 268 aaPredicted RBP8.52□□□□□ -1.05
PHGDH-222ENST00000641587 GLRXP35754 106 aa8.52□□□□□ -1.05
PHGDH-222ENST00000641587 RPS27P42677 84 aaKnown RBP8.52□□□□□ -1.05
PHGDH-222ENST00000641587 EVX1P49640 407 aa8.52□□□□□ -1.05
PHGDH-222ENST00000641587 ZNF133P52736 654 aaPredicted RBP8.52□□□□□ -1.05
PHGDH-222ENST00000641587 HCCSP53701 268 aa8.52□□□□□ -1.05
PHGDH-222ENST00000641587 ERVS71-1P61550 626 aa8.52□□□□□ -1.05
PHGDH-222ENST00000641587 HNRNPA0Q13151 305 aaKnown RBP8.52□□□□□ -1.05
PHGDH-222ENST00000641587 EIF2B1Q14232 305 aaKnown RBP8.52□□□□□ -1.05
PHGDH-222ENST00000641587 RAB39AQ14964 217 aa8.52□□□□□ -1.05
PHGDH-222ENST00000641587 PRR31Q5SQ13 230 aa8.52□□□□□ -1.05
PHGDH-222ENST00000641587 PRSS48Q7RTY5 328 aa8.52□□□□□ -1.05
PHGDH-222ENST00000641587 C1QL2Q7Z5L3 287 aa8.52□□□□□ -1.05
PHGDH-222ENST00000641587 ZNF584Q8IVC4 421 aa8.52□□□□□ -1.05
PHGDH-222ENST00000641587 LINC00346Q8IVM7 164 aa8.52□□□□□ -1.05
PHGDH-222ENST00000641587 TIGD4Q8IY51 512 aa8.52□□□□□ -1.05
PHGDH-222ENST00000641587 LRRC18Q8N456 261 aa8.52□□□□□ -1.05
PHGDH-222ENST00000641587 ACBD7Q8N6N7 88 aa8.52□□□□□ -1.05
PHGDH-222ENST00000641587 IL17RDQ8NFM7 739 aa8.52□□□□□ -1.05
PHGDH-222ENST00000641587 OR2AJ1Q8NGZ0 328 aa8.52□□□□□ -1.05
PHGDH-222ENST00000641587 FGFBP3Q8TAT2 258 aa8.52□□□□□ -1.05
PHGDH-222ENST00000641587 THEM6Q8WUY1 208 aa8.52□□□□□ -1.05
PHGDH-222ENST00000641587 GTF3AQ92664 365 aaKnown RBP8.52□□□□□ -1.05
PHGDH-222ENST00000641587 DUX5Q96PT3 197 aa8.52□□□□□ -1.05
PHGDH-222ENST00000641587 MRPS26Q9BYN8 205 aaKnown RBP8.52□□□□□ -1.05
PHGDH-222ENST00000641587 YIPF3Q9GZM5 350 aa8.52□□□□□ -1.05
PHGDH-222ENST00000641587 KCNN2Q9H2S1 579 aa8.52□□□□□ -1.05
PHGDH-222ENST00000641587 OR51B6Q9H340 312 aa8.52□□□□□ -1.05
PHGDH-222ENST00000641587 MS4A5Q9H3V2 200 aa8.52□□□□□ -1.05
PHGDH-222ENST00000641587 DUSP21Q9H596 190 aa8.52□□□□□ -1.05
PHGDH-222ENST00000641587 ZNF665Q9H7R5 613 aa8.52□□□□□ -1.05
PHGDH-222ENST00000641587 FGF20Q9NP95 211 aaPredicted RBP8.52□□□□□ -1.05
PHGDH-222ENST00000641587 MRPS18AQ9NVS2 196 aaKnown RBP8.52□□□□□ -1.05
PHGDH-222ENST00000641587 TMEM38BQ9NVV0 291 aa8.52□□□□□ -1.05
PHGDH-222ENST00000641587 MRPL22Q9NWU5 206 aaKnown RBP8.52□□□□□ -1.05
PHGDH-222ENST00000641587 SCOCQ9UIL1 159 aa8.52□□□□□ -1.05
PHGDH-222ENST00000641587 LAMP5Q9UJQ1 280 aa8.52□□□□□ -1.05
PHGDH-222ENST00000641587 DIMT1Q9UNQ2 313 aaKnown RBP8.52□□□□□ -1.05
PHGDH-222ENST00000641587 EXOGQ9Y2C4 368 aaKnown RBP8.52□□□□□ -1.05
PHGDH-222ENST00000641587 EXOSC1Q9Y3B2 195 aaKnown RBP8.52□□□□□ -1.05
PHGDH-222ENST00000641587 PPIAL4AQ9Y536 164 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms