RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 KLHDC2Q9Y2U9 406 aa13.79□□□□□ -0.2
CACNA1A-229ENST00000636670 GMPPBQ9Y5P6 360 aa13.79□□□□□ -0.2
CACNA1A-229ENST00000636670 YLPM1P49750 1951 aaKnown RBP13.79□□□□□ -0.2
CACNA1A-229ENST00000636670 DYSFO75923 2080 aa13.79□□□□□ -0.2
CACNA1A-229ENST00000636670 PHYHO14832 338 aa13.78□□□□□ -0.2
CACNA1A-229ENST00000636670 LY6HO94772 140 aa13.78□□□□□ -0.2
CACNA1A-229ENST00000636670 H2BFMP0C1H6 154 aa13.78□□□□□ -0.2
CACNA1A-229ENST00000636670 SLC25A16P16260 332 aa13.78□□□□□ -0.2
CACNA1A-229ENST00000636670 CX3CR1P49238 355 aa13.78□□□□□ -0.2
CACNA1A-229ENST00000636670 ZNF81P51508 661 aa13.78□□□□□ -0.2
CACNA1A-229ENST00000636670 PRKXP51817 358 aa13.78□□□□□ -0.2
CACNA1A-229ENST00000636670 PSMA6P60900 246 aaKnown RBP13.78□□□□□ -0.2
CACNA1A-229ENST00000636670 SNRPGP62308 76 aaKnown RBP13.78□□□□□ -0.2
CACNA1A-229ENST00000636670 FAM209AQ5JX71 171 aa13.78□□□□□ -0.2
CACNA1A-229ENST00000636670 SLC25A30Q5SVS4 291 aa13.78□□□□□ -0.2
CACNA1A-229ENST00000636670 MEDAGQ5VYS4 303 aa13.78□□□□□ -0.2
CACNA1A-229ENST00000636670 SPATC1Q76KD6 591 aa13.78□□□□□ -0.2
CACNA1A-229ENST00000636670 ZCCHC24Q8N2G6 241 aaKnown RBP13.78□□□□□ -0.2
CACNA1A-229ENST00000636670 THEM6Q8WUY1 208 aa13.78□□□□□ -0.2
CACNA1A-229ENST00000636670 ASB17Q8WXJ9 295 aa13.78□□□□□ -0.2
CACNA1A-229ENST00000636670 HAVCR1Q96D42 359 aa13.78□□□□□ -0.2
CACNA1A-229ENST00000636670 CMBLQ96DG6 245 aa13.78□□□□□ -0.2
CACNA1A-229ENST00000636670 ZNF582Q96NG8 517 aaPredicted RBP13.78□□□□□ -0.2
CACNA1A-229ENST00000636670 DIRC2Q96SL1 478 aa13.78□□□□□ -0.2
CACNA1A-229ENST00000636670 RHNO1Q9BSD3 238 aa13.78□□□□□ -0.2
CACNA1A-229ENST00000636670 SP140LQ9H930 580 aa13.78□□□□□ -0.2
CACNA1A-229ENST00000636670 DNAJC27Q9NZQ0 273 aa13.78□□□□□ -0.2
CACNA1A-229ENST00000636670 LOC390937A0A1W2PQ73 354 aa13.77□□□□□ -0.21
CACNA1A-229ENST00000636670 ZSCAN5BA6NJL1 495 aa13.77□□□□□ -0.21
CACNA1A-229ENST00000636670 IQCF6A8MYZ5 107 aa13.77□□□□□ -0.21
CACNA1A-229ENST00000636670 SLC16A6O15403 523 aa13.77□□□□□ -0.21
CACNA1A-229ENST00000636670 XRCC2O43543 280 aa13.77□□□□□ -0.21
CACNA1A-229ENST00000636670 MPZL2O60487 215 aa13.77□□□□□ -0.21
CACNA1A-229ENST00000636670 NCR1O76036 304 aa13.77□□□□□ -0.21
CACNA1A-229ENST00000636670 SBK2P0C263 348 aa13.77□□□□□ -0.21
CACNA1A-229ENST00000636670 DAOP14920 347 aa13.77□□□□□ -0.21
CACNA1A-229ENST00000636670 SELEP16581 610 aa13.77□□□□□ -0.21
CACNA1A-229ENST00000636670 MRPS11P82912 194 aaKnown RBP13.77□□□□□ -0.21
CACNA1A-229ENST00000636670 SNAI3Q3KNW1 292 aa13.77□□□□□ -0.21
CACNA1A-229ENST00000636670 OGFRL1Q5TC84 451 aaPredicted RBP13.77□□□□□ -0.21
CACNA1A-229ENST00000636670 KCTD18Q6PI47 426 aaPredicted RBP13.77□□□□□ -0.21
CACNA1A-229ENST00000636670 DEGS2Q6QHC5 323 aa13.77□□□□□ -0.21
CACNA1A-229ENST00000636670 MRPL21Q7Z2W9 205 aaKnown RBP13.77□□□□□ -0.21
CACNA1A-229ENST00000636670 SLC35F2Q8IXU6 374 aa13.77□□□□□ -0.21
CACNA1A-229ENST00000636670 C10orf105Q8TEF2 133 aa13.77□□□□□ -0.21
CACNA1A-229ENST00000636670 GTF3AQ92664 365 aaKnown RBP13.77□□□□□ -0.21
CACNA1A-229ENST00000636670 PIMREGQ9BSJ6 248 aa13.77□□□□□ -0.21
CACNA1A-229ENST00000636670 CLN6Q9NWW5 311 aa13.77□□□□□ -0.21
CACNA1A-229ENST00000636670 ZDHHC8Q9ULC8 765 aa13.77□□□□□ -0.21
CACNA1A-229ENST00000636670 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.77□□□□□ -0.21
CACNA1A-229ENST00000636670 IGHV4-30-2A0A087WSY4 118 aa13.76□□□□□ -0.21
CACNA1A-229ENST00000636670 LOC100130705A0A1B0GUX0 176 aa13.76□□□□□ -0.21
CACNA1A-229ENST00000636670 IGHV1-46P01743 117 aa13.76□□□□□ -0.21
CACNA1A-229ENST00000636670 ANXA2P07355 339 aaKnown RBP13.76□□□□□ -0.21
CACNA1A-229ENST00000636670 CD55P08174 381 aa13.76□□□□□ -0.21
CACNA1A-229ENST00000636670 MAGEB1P43366 347 aa13.76□□□□□ -0.21
CACNA1A-229ENST00000636670 ROM1Q03395 351 aa13.76□□□□□ -0.21
CACNA1A-229ENST00000636670 GK2Q14410 553 aaPredicted RBP13.76□□□□□ -0.21
CACNA1A-229ENST00000636670 HLXQ14774 488 aaPredicted RBP13.76□□□□□ -0.21
CACNA1A-229ENST00000636670 OCLNQ16625 522 aa13.76□□□□□ -0.21
CACNA1A-229ENST00000636670 LPCAT4Q643R3 524 aa13.76□□□□□ -0.21
CACNA1A-229ENST00000636670 LRRN1Q6UXK5 716 aa13.76□□□□□ -0.21
CACNA1A-229ENST00000636670 KRT77Q7Z794 578 aa13.76□□□□□ -0.21
CACNA1A-229ENST00000636670 NAA40Q86UY6 237 aa13.76□□□□□ -0.21
CACNA1A-229ENST00000636670 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.76□□□□□ -0.21
CACNA1A-229ENST00000636670 ZNF786Q8N393 782 aa13.76□□□□□ -0.21
CACNA1A-229ENST00000636670 ZNF555Q8NEP9 628 aa13.76□□□□□ -0.21
CACNA1A-229ENST00000636670 OR52H1Q8NGJ2 320 aa13.76□□□□□ -0.21
CACNA1A-229ENST00000636670 OR51G2Q8NGK0 314 aa13.76□□□□□ -0.21
CACNA1A-229ENST00000636670 UBASH3BQ8TF42 649 aa13.76□□□□□ -0.21
CACNA1A-229ENST00000636670 OR8B4Q96RC9 309 aa13.76□□□□□ -0.21
CACNA1A-229ENST00000636670 FAM118AQ9NWS6 357 aa13.76□□□□□ -0.21
CACNA1A-229ENST00000636670 COPS3Q9UNS2 423 aa13.76□□□□□ -0.21
CACNA1A-229ENST00000636670 LRP12Q9Y561 859 aa13.76□□□□□ -0.21
CACNA1A-229ENST00000636670 SNTNA6NMZ2 147 aa13.75□□□□□ -0.21
CACNA1A-229ENST00000636670 ZNF670-ZNF695F2Z2N8 137 aa13.75□□□□□ -0.21
CACNA1A-229ENST00000636670 DLGAP1O14490 977 aa13.75□□□□□ -0.21
CACNA1A-229ENST00000636670 LMX1BO60663 402 aa13.75□□□□□ -0.21
CACNA1A-229ENST00000636670 ZNF254O75437 659 aa13.75□□□□□ -0.21
CACNA1A-229ENST00000636670 HPXP02790 462 aa13.75□□□□□ -0.21
CACNA1A-229ENST00000636670 SLC2A1P11166 492 aa13.75□□□□□ -0.21
CACNA1A-229ENST00000636670 GABRB1P18505 474 aa13.75□□□□□ -0.21
CACNA1A-229ENST00000636670 ACHEP22303 614 aa13.75□□□□□ -0.21
CACNA1A-229ENST00000636670 ANOS1P23352 680 aa13.75□□□□□ -0.21
CACNA1A-229ENST00000636670 DCTDP32321 178 aa13.75□□□□□ -0.21
CACNA1A-229ENST00000636670 ZNF121P58317 390 aaPredicted RBP13.75□□□□□ -0.21
CACNA1A-229ENST00000636670 LRRC36Q1X8D7 754 aa13.75□□□□□ -0.21
CACNA1A-229ENST00000636670 GLYATL3Q5SZD4 288 aa13.75□□□□□ -0.21
CACNA1A-229ENST00000636670 CYB5R2Q6BCY4 276 aa13.75□□□□□ -0.21
CACNA1A-229ENST00000636670 OR2T2Q6IF00 324 aa13.75□□□□□ -0.21
CACNA1A-229ENST00000636670 PGAP1Q75T13 922 aa13.75□□□□□ -0.21
CACNA1A-229ENST00000636670 PRSS45Q7RTY3 260 aa13.75□□□□□ -0.21
CACNA1A-229ENST00000636670 ENTHD1Q8IYW4 607 aa13.75□□□□□ -0.21
CACNA1A-229ENST00000636670 ZNF679Q8IYX0 411 aa13.75□□□□□ -0.21
CACNA1A-229ENST00000636670 SPSB4Q96A44 273 aa13.75□□□□□ -0.21
CACNA1A-229ENST00000636670 APOL4Q9BPW4 351 aa13.75□□□□□ -0.21
CACNA1A-229ENST00000636670 MROQ9BYG7 248 aa13.75□□□□□ -0.21
CACNA1A-229ENST00000636670 VCXQ9H320 206 aa13.75□□□□□ -0.21
CACNA1A-229ENST00000636670 SAP30LQ9HAJ7 183 aa13.75□□□□□ -0.21
CACNA1A-229ENST00000636670 A0A096LNT2 108 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms