RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 MGPP08493 103 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 MELTFP08582 738 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 ZBTB25P24278 435 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 PIGAP37287 484 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 GPR17Q13304 367 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 ACKR1Q16570 336 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 KISS1RQ969F8 398 aaPredicted RBP5.51□□□□□ -1.53
SCN1A-212ENST00000636194 SLCO4A1Q96BD0 722 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 PPP1R3CQ9UQK1 317 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 MFSD2BA6NFX1 497 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 F2RL2O00254 374 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 NDUFB3O43676 98 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 BCL3P20749 454 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 PCSK6P29122 969 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 HOXC13P31276 330 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 PSMB10P40306 273 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 PXNP49023 591 aaPredicted RBP5.51□□□□□ -1.53
SCN1A-212ENST00000636194 SUCLG1P53597 346 aaKnown RBP5.51□□□□□ -1.53
SCN1A-212ENST00000636194 PAFAH1B3Q15102 231 aaKnown RBP5.51□□□□□ -1.53
SCN1A-212ENST00000636194 C6orf136Q5SQH8 315 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 ZNF678Q5SXM1 525 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 OR7E24Q6IFN5 339 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 NAT8LQ8N9F0 302 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 MARCH1Q8TCQ1 289 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 ERGIC1Q969X5 290 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 RANGRFQ9HD47 186 aaPredicted RBP5.51□□□□□ -1.53
SCN1A-212ENST00000636194 NRIP3Q9NQ35 241 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 IL17RBQ9NRM6 502 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 OR5V1Q9UGF6 321 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 ABCC6O95255 1503 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 ZNF320A2RRD8 509 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 ZNF593O00488 134 aaPredicted RBP5.51□□□□□ -1.53
SCN1A-212ENST00000636194 CD1EP15812 388 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 BTF3P20290 206 aaKnown RBP5.51□□□□□ -1.53
SCN1A-212ENST00000636194 GPR3P46089 330 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 RPEL1Q2QD12 228 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 HSF5Q4G112 596 aaPredicted RBP5.51□□□□□ -1.53
SCN1A-212ENST00000636194 SPANXN5Q5MJ07 72 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 RHOXF1Q8NHV9 184 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 ST8SIA4Q92187 359 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 DUSP9Q99956 384 aaKnown RBP5.51□□□□□ -1.53
SCN1A-212ENST00000636194 GPR87Q9BY21 358 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 SPNS1Q9H2V7 528 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 LMAN1LQ9HAT1 526 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 TRGV8A0A0C4DH27 118 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 KLF11O14901 512 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 NME2P22392 152 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 YPEL5P62699 121 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 MRPS21P82921 87 aaKnown RBP5.51□□□□□ -1.53
SCN1A-212ENST00000636194 HERPUD1Q15011 391 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 ELFN2Q5R3F8 820 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 MARCH8Q5T0T0 291 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 ASCL5Q7RTU5 278 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 PTOV1Q86YD1 416 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 MTMR14Q8NCE2 650 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 OR13F1Q8NGS4 319 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 OR10AG1Q8NH19 301 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 OIT3Q8WWZ8 545 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 FAM163AQ96GL9 167 aaPredicted RBP5.51□□□□□ -1.53
SCN1A-212ENST00000636194 FEVQ99581 238 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 TINAGL1Q9GZM7 467 aaPredicted RBP5.51□□□□□ -1.53
SCN1A-212ENST00000636194 ANK1P16157 1881 aa5.51□□□□□ -1.53
SCN1A-212ENST00000636194 AQP8O94778 261 aa5.5□□□□□ -1.53
SCN1A-212ENST00000636194 SPINT3P49223 89 aa5.5□□□□□ -1.53
SCN1A-212ENST00000636194 CDKN2DP55273 166 aa5.5□□□□□ -1.53
SCN1A-212ENST00000636194 DACT2Q5SW24 774 aa5.5□□□□□ -1.53
SCN1A-212ENST00000636194 RGS7BPQ6MZT1 257 aaPredicted RBP5.5□□□□□ -1.53
SCN1A-212ENST00000636194 RHBDD2Q6NTF9 364 aa5.5□□□□□ -1.53
SCN1A-212ENST00000636194 ZFP41Q8N8Y5 198 aa5.5□□□□□ -1.53
SCN1A-212ENST00000636194 OR10Z1Q8NGY1 313 aa5.5□□□□□ -1.53
SCN1A-212ENST00000636194 LHX4Q969G2 390 aa5.5□□□□□ -1.53
SCN1A-212ENST00000636194 RPUSD4Q96CM3 377 aaKnown RBP5.5□□□□□ -1.53
SCN1A-212ENST00000636194 F2RL3Q96RI0 385 aa5.5□□□□□ -1.53
SCN1A-212ENST00000636194 METTL17Q9H7H0 456 aaPredicted RBP5.5□□□□□ -1.53
SCN1A-212ENST00000636194 IL23AQ9NPF7 189 aa5.5□□□□□ -1.53
SCN1A-212ENST00000636194 OCIAD1Q9NX40 245 aa5.5□□□□□ -1.53
SCN1A-212ENST00000636194 FBLL1A6NHQ2 334 aaKnown RBP5.5□□□□□ -1.53
SCN1A-212ENST00000636194 CA5AP35218 305 aa5.5□□□□□ -1.53
SCN1A-212ENST00000636194 RIGQ13278 110 aa5.5□□□□□ -1.53
SCN1A-212ENST00000636194 LRRC55Q6ZSA7 311 aa5.5□□□□□ -1.53
SCN1A-212ENST00000636194 ARL6IP6Q8N6S5 226 aa5.5□□□□□ -1.53
SCN1A-212ENST00000636194 ENDOVQ8N8Q3 282 aaKnown RBP5.5□□□□□ -1.53
SCN1A-212ENST00000636194 SORBS1Q9BX66 1292 aaKnown RBP5.5□□□□□ -1.53
SCN1A-212ENST00000636194 GABARAPL3Q9BY60 117 aa5.5□□□□□ -1.53
SCN1A-212ENST00000636194 C1GALT1Q9NS00 363 aa5.5□□□□□ -1.53
SCN1A-212ENST00000636194 NDUFB11Q9NX14 153 aa5.5□□□□□ -1.53
SCN1A-212ENST00000636194 CNOT2Q9NZN8 540 aaKnown RBP5.5□□□□□ -1.53
SCN1A-212ENST00000636194 ZNF629Q9UEG4 869 aaPredicted RBP5.5□□□□□ -1.53
SCN1A-212ENST00000636194 DIMT1Q9UNQ2 313 aaKnown RBP5.5□□□□□ -1.53
SCN1A-212ENST00000636194 LINC01387J3KSC0 135 aa5.5□□□□□ -1.53
SCN1A-212ENST00000636194 NRASP01111 189 aa5.5□□□□□ -1.53
SCN1A-212ENST00000636194 GYPAP02724 150 aa5.5□□□□□ -1.53
SCN1A-212ENST00000636194 ACAA1P09110 424 aaPredicted RBP5.5□□□□□ -1.53
SCN1A-212ENST00000636194 WNT5AP41221 380 aa5.5□□□□□ -1.53
SCN1A-212ENST00000636194 ZP2Q05996 745 aa5.5□□□□□ -1.53
SCN1A-212ENST00000636194 LINC00696Q6ZRV3 163 aa5.5□□□□□ -1.53
SCN1A-212ENST00000636194 NUFIP2Q7Z417 695 aaKnown RBP5.5□□□□□ -1.53
SCN1A-212ENST00000636194 ESAMQ96AP7 390 aa5.5□□□□□ -1.53
SCN1A-212ENST00000636194 MUS81Q96NY9 551 aa5.5□□□□□ -1.53
SCN1A-212ENST00000636194 RASL11BQ9BPW5 248 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms