RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 LINC01590Q5TEZ4 76 aa14.39□□□□□ -0.11
HMGN3-203ENST00000620514 PRAMEF6Q5VXH4 476 aa14.39□□□□□ -0.11
HMGN3-203ENST00000620514 CD300LDQ6UXZ3 194 aa14.39□□□□□ -0.11
HMGN3-203ENST00000620514 SPATC1Q76KD6 591 aa14.39□□□□□ -0.11
HMGN3-203ENST00000620514 MUC20Q8N307 709 aaPredicted RBP14.39□□□□□ -0.11
HMGN3-203ENST00000620514 OR6K6Q8NGW6 343 aa14.39□□□□□ -0.11
HMGN3-203ENST00000620514 CANT1Q8WVQ1 401 aa14.39□□□□□ -0.11
HMGN3-203ENST00000620514 SPRYD4Q8WW59 207 aaPredicted RBP14.39□□□□□ -0.11
HMGN3-203ENST00000620514 POP5Q969H6 163 aaKnown RBP14.39□□□□□ -0.11
HMGN3-203ENST00000620514 SLAMF6Q96DU3 332 aa14.39□□□□□ -0.11
HMGN3-203ENST00000620514 SLC6A7Q99884 636 aa14.39□□□□□ -0.11
HMGN3-203ENST00000620514 POLR3KQ9Y2Y1 108 aaPredicted RBP14.39□□□□□ -0.11
HMGN3-203ENST00000620514 N6AMT1Q9Y5N5 214 aa14.39□□□□□ -0.11
HMGN3-203ENST00000620514 ANK2Q01484 3957 aa14.38□□□□□ -0.11
HMGN3-203ENST00000620514 RIIAD1A6NNX1 92 aa14.38□□□□□ -0.11
HMGN3-203ENST00000620514 CD300LBA8K4G0 201 aa14.38□□□□□ -0.11
HMGN3-203ENST00000620514 A8MXK9 166 aa14.38□□□□□ -0.11
HMGN3-203ENST00000620514 IFNGP01579 166 aa14.38□□□□□ -0.11
HMGN3-203ENST00000620514 ZNF12P17014 697 aa14.38□□□□□ -0.11
HMGN3-203ENST00000620514 CA6P23280 308 aa14.38□□□□□ -0.11
HMGN3-203ENST00000620514 RAD23AP54725 363 aa14.38□□□□□ -0.11
HMGN3-203ENST00000620514 HILS1P60008 231 aa14.38□□□□□ -0.11
HMGN3-203ENST00000620514 HOXA4Q00056 320 aaPredicted RBP14.38□□□□□ -0.11
HMGN3-203ENST00000620514 ZNF154Q13106 437 aa14.38□□□□□ -0.11
HMGN3-203ENST00000620514 ZNF181Q2M3W8 571 aa14.38□□□□□ -0.11
HMGN3-203ENST00000620514 TEX30Q5JUR7 227 aa14.38□□□□□ -0.11
HMGN3-203ENST00000620514 DRAM2Q6UX65 266 aa14.38□□□□□ -0.11
HMGN3-203ENST00000620514 TEX47Q8TBZ9 253 aa14.38□□□□□ -0.11
HMGN3-203ENST00000620514 C22orf15Q8WYQ4 148 aa14.38□□□□□ -0.11
HMGN3-203ENST00000620514 DVL3Q92997 716 aaPredicted RBP14.38□□□□□ -0.11
HMGN3-203ENST00000620514 TMEM246Q9BRR3 403 aa14.38□□□□□ -0.11
HMGN3-203ENST00000620514 CMC2Q9NRP2 79 aa14.38□□□□□ -0.11
HMGN3-203ENST00000620514 UFSP2Q9NUQ7 469 aa14.38□□□□□ -0.11
HMGN3-203ENST00000620514 INSIG2Q9Y5U4 225 aa14.38□□□□□ -0.11
HMGN3-203ENST00000620514 DHRS12A0PJE2 317 aa14.37□□□□□ -0.11
HMGN3-203ENST00000620514 AQP12BA6NM10 295 aa14.37□□□□□ -0.11
HMGN3-203ENST00000620514 H3BN98 237 aa14.37□□□□□ -0.11
HMGN3-203ENST00000620514 ZNF3P17036 446 aa14.37□□□□□ -0.11
HMGN3-203ENST00000620514 GRK5P34947 590 aa14.37□□□□□ -0.11
HMGN3-203ENST00000620514 CD200P41217 278 aa14.37□□□□□ -0.11
HMGN3-203ENST00000620514 GATA4P43694 442 aa14.37□□□□□ -0.11
HMGN3-203ENST00000620514 TAF13Q15543 124 aa14.37□□□□□ -0.11
HMGN3-203ENST00000620514 OR8G1Q15617 311 aa14.37□□□□□ -0.11
HMGN3-203ENST00000620514 MPPED2Q15777 294 aa14.37□□□□□ -0.11
HMGN3-203ENST00000620514 ESCO2Q56NI9 601 aa14.37□□□□□ -0.11
HMGN3-203ENST00000620514 TRPM8Q7Z2W7 1104 aa14.37□□□□□ -0.11
HMGN3-203ENST00000620514 KLBQ86Z14 1044 aa14.37□□□□□ -0.11
HMGN3-203ENST00000620514 AQP12AQ8IXF9 295 aa14.37□□□□□ -0.11
HMGN3-203ENST00000620514 HS3ST5Q8IZT8 346 aa14.37□□□□□ -0.11
HMGN3-203ENST00000620514 C19orf18Q8NEA5 215 aa14.37□□□□□ -0.11
HMGN3-203ENST00000620514 OTULINQ96BN8 352 aa14.37□□□□□ -0.11
HMGN3-203ENST00000620514 KCNJ15Q99712 375 aa14.37□□□□□ -0.11
HMGN3-203ENST00000620514 PDP1Q9P0J1 537 aaPredicted RBP14.37□□□□□ -0.11
HMGN3-203ENST00000620514 GGT3PA6NGU5 568 aa14.36□□□□□ -0.11
HMGN3-203ENST00000620514 LRRC30A6NM36 301 aa14.36□□□□□ -0.11
HMGN3-203ENST00000620514 ZNF878C9JN71 531 aa14.36□□□□□ -0.11
HMGN3-203ENST00000620514 FAM20BO75063 409 aa14.36□□□□□ -0.11
HMGN3-203ENST00000620514 RPS2P15880 293 aaKnown RBP14.36□□□□□ -0.11
HMGN3-203ENST00000620514 POU1F1P28069 291 aa14.36□□□□□ -0.11
HMGN3-203ENST00000620514 EIF2B1Q14232 305 aaKnown RBP14.36□□□□□ -0.11
HMGN3-203ENST00000620514 GK3PQ14409 553 aa14.36□□□□□ -0.11
HMGN3-203ENST00000620514 ZNF404Q494X3 552 aa14.36□□□□□ -0.11
HMGN3-203ENST00000620514 KLF17Q5JT82 389 aaPredicted RBP14.36□□□□□ -0.11
HMGN3-203ENST00000620514 USP43Q70EL4 1123 aa14.36□□□□□ -0.11
HMGN3-203ENST00000620514 ERI1Q8IV48 349 aaKnown RBP14.36□□□□□ -0.11
HMGN3-203ENST00000620514 C1orf87Q8N0U7 546 aa14.36□□□□□ -0.11
HMGN3-203ENST00000620514 CELF2-AS1Q8N7Q2 184 aa14.36□□□□□ -0.11
HMGN3-203ENST00000620514 OR6N2Q8NGY6 317 aa14.36□□□□□ -0.11
HMGN3-203ENST00000620514 ZFAND2BQ8WV99 257 aa14.36□□□□□ -0.11
HMGN3-203ENST00000620514 ADAT1Q9BUB4 502 aaKnown RBP14.36□□□□□ -0.11
HMGN3-203ENST00000620514 SSBP3Q9BWW4 388 aaPredicted RBP14.36□□□□□ -0.11
HMGN3-203ENST00000620514 ESM1Q9NQ30 184 aa14.36□□□□□ -0.11
HMGN3-203ENST00000620514 OR5V1Q9UGF6 321 aa14.36□□□□□ -0.11
HMGN3-203ENST00000620514 LRCH1Q9Y2L9 728 aa14.36□□□□□ -0.11
HMGN3-203ENST00000620514 PPIAL4AQ9Y536 164 aa14.36□□□□□ -0.11
HMGN3-203ENST00000620514 AUP1Q9Y679 476 aa14.36□□□□□ -0.11
HMGN3-203ENST00000620514 ARRDC5A6NEK1 342 aa14.35□□□□□ -0.11
HMGN3-203ENST00000620514 GNGT2O14610 69 aa14.35□□□□□ -0.11
HMGN3-203ENST00000620514 BLVRAP53004 296 aa14.35□□□□□ -0.11
HMGN3-203ENST00000620514 PAX2Q02962 417 aa14.35□□□□□ -0.11
HMGN3-203ENST00000620514 GINS1Q14691 196 aa14.35□□□□□ -0.11
HMGN3-203ENST00000620514 LYPD2Q6UXB3 125 aa14.35□□□□□ -0.11
HMGN3-203ENST00000620514 DPY19L4Q7Z388 723 aa14.35□□□□□ -0.11
HMGN3-203ENST00000620514 BPIFB2Q8N4F0 458 aa14.35□□□□□ -0.11
HMGN3-203ENST00000620514 OR56B2PQ8NGI1 322 aa14.35□□□□□ -0.11
HMGN3-203ENST00000620514 Q8TCH9 128 aa14.35□□□□□ -0.11
HMGN3-203ENST00000620514 BCAS4Q8TDM0 211 aa14.35□□□□□ -0.11
HMGN3-203ENST00000620514 SLC7A6OSQ96CW6 309 aaPredicted RBP14.35□□□□□ -0.11
HMGN3-203ENST00000620514 NEIL1Q96FI4 390 aaPredicted RBP14.35□□□□□ -0.11
HMGN3-203ENST00000620514 INTS14Q96SY0 518 aa14.35□□□□□ -0.11
HMGN3-203ENST00000620514 AMELYQ99218 206 aa14.35□□□□□ -0.11
HMGN3-203ENST00000620514 SUCNR1Q9BXA5 334 aa14.35□□□□□ -0.11
HMGN3-203ENST00000620514 OR51V1Q9H2C8 321 aa14.35□□□□□ -0.11
HMGN3-203ENST00000620514 FAM53CQ9NYF3 392 aa14.35□□□□□ -0.11
HMGN3-203ENST00000620514 MIOXQ9UGB7 285 aa14.35□□□□□ -0.11
HMGN3-203ENST00000620514 GYG2O15488 501 aa14.34□□□□□ -0.11
HMGN3-203ENST00000620514 TBX1O43435 398 aa14.34□□□□□ -0.11
HMGN3-203ENST00000620514 GLCEO94923 617 aa14.34□□□□□ -0.11
HMGN3-203ENST00000620514 IRF2P14316 349 aa14.34□□□□□ -0.11
HMGN3-203ENST00000620514 PRKACGP22612 351 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms