RNA–Protein interactions for RNA: ENST00000604036.1

FOCAD-211, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-211ENST00000604036 ADH4P08319 380 aa20.3■□□□□ 0.84
FOCAD-211ENST00000604036 ATP6V1E1P36543 226 aa20.3■□□□□ 0.84
FOCAD-211ENST00000604036 POU4F2Q12837 409 aa20.3■□□□□ 0.84
FOCAD-211ENST00000604036 TMED1Q13445 227 aa20.3■□□□□ 0.84
FOCAD-211ENST00000604036 ZNF555Q8NEP9 628 aa20.3■□□□□ 0.84
FOCAD-211ENST00000604036 OR2Z1Q8NG97 314 aa20.3■□□□□ 0.84
FOCAD-211ENST00000604036 YIPF5Q969M3 257 aa20.3■□□□□ 0.84
FOCAD-211ENST00000604036 PGAM5Q96HS1 289 aa20.3■□□□□ 0.84
FOCAD-211ENST00000604036 MNTQ99583 582 aa20.3■□□□□ 0.84
FOCAD-211ENST00000604036 SMR3AQ99954 134 aa20.3■□□□□ 0.84
FOCAD-211ENST00000604036 MROQ9BYG7 248 aa20.3■□□□□ 0.84
FOCAD-211ENST00000604036 EGLN1Q9GZT9 426 aa20.3■□□□□ 0.84
FOCAD-211ENST00000604036 NIPAL2Q9H841 368 aa20.3■□□□□ 0.84
FOCAD-211ENST00000604036 SAP30LQ9HAJ7 183 aa20.3■□□□□ 0.84
FOCAD-211ENST00000604036 CLN6Q9NWW5 311 aa20.3■□□□□ 0.84
FOCAD-211ENST00000604036 VWC2LB2RUY7 222 aa20.29■□□□□ 0.84
FOCAD-211ENST00000604036 ZNF670-ZNF695F2Z2N8 137 aa20.29■□□□□ 0.84
FOCAD-211ENST00000604036 XRCC2O43543 280 aa20.29■□□□□ 0.84
FOCAD-211ENST00000604036 APOL3O95236 402 aa20.29■□□□□ 0.84
FOCAD-211ENST00000604036 NR4A2P43354 598 aa20.29■□□□□ 0.84
FOCAD-211ENST00000604036 CXCR4P61073 352 aa20.29■□□□□ 0.84
FOCAD-211ENST00000604036 TNFAIP6P98066 277 aaPredicted RBP20.29■□□□□ 0.84
FOCAD-211ENST00000604036 TIGD6Q17RP2 521 aa20.29■□□□□ 0.84
FOCAD-211ENST00000604036 SLC25A30Q5SVS4 291 aa20.29■□□□□ 0.84
FOCAD-211ENST00000604036 MEDAGQ5VYS4 303 aa20.29■□□□□ 0.84
FOCAD-211ENST00000604036 DEGS2Q6QHC5 323 aa20.29■□□□□ 0.84
FOCAD-211ENST00000604036 RFLNBQ8N5W9 214 aa20.29■□□□□ 0.84
FOCAD-211ENST00000604036 PACRGLQ8N7B6 248 aa20.29■□□□□ 0.84
FOCAD-211ENST00000604036 ZNF540Q8NDQ6 660 aa20.29■□□□□ 0.84
FOCAD-211ENST00000604036 ELMOD3Q96FG2 381 aa20.29■□□□□ 0.84
FOCAD-211ENST00000604036 REPIN1Q9BWE0 567 aaKnown RBP20.29■□□□□ 0.84
FOCAD-211ENST00000604036 C8orf4Q9NR00 106 aa20.29■□□□□ 0.84
FOCAD-211ENST00000604036 AASSQ9UDR5 926 aa20.29■□□□□ 0.84
FOCAD-211ENST00000604036 IKZF2Q9UKS7 526 aa20.29■□□□□ 0.84
FOCAD-211ENST00000604036 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.29■□□□□ 0.84
FOCAD-211ENST00000604036 GGT3PA6NGU5 568 aa20.28■□□□□ 0.84
FOCAD-211ENST00000604036 DLGAP1O14490 977 aa20.28■□□□□ 0.84
FOCAD-211ENST00000604036 PHYHO14832 338 aa20.28■□□□□ 0.84
FOCAD-211ENST00000604036 SLC16A6O15403 523 aa20.28■□□□□ 0.84
FOCAD-211ENST00000604036 LILRA1O75019 489 aa20.28■□□□□ 0.84
FOCAD-211ENST00000604036 ACHEP22303 614 aa20.28■□□□□ 0.84
FOCAD-211ENST00000604036 TNFSF4P23510 183 aa20.28■□□□□ 0.84
FOCAD-211ENST00000604036 GIFP27352 417 aa20.28■□□□□ 0.84
FOCAD-211ENST00000604036 MRPS11P82912 194 aaKnown RBP20.28■□□□□ 0.84
FOCAD-211ENST00000604036 OCLNQ16625 522 aa20.28■□□□□ 0.84
FOCAD-211ENST00000604036 ZNF322Q6U7Q0 402 aaPredicted RBP20.28■□□□□ 0.84
FOCAD-211ENST00000604036 PRSS45Q7RTY3 260 aa20.28■□□□□ 0.84
FOCAD-211ENST00000604036 BIVMQ86UB2 503 aa20.28■□□□□ 0.84
FOCAD-211ENST00000604036 ENTHD1Q8IYW4 607 aa20.28■□□□□ 0.84
FOCAD-211ENST00000604036 ZNF679Q8IYX0 411 aa20.28■□□□□ 0.84
FOCAD-211ENST00000604036 OR52H1Q8NGJ2 320 aa20.28■□□□□ 0.84
FOCAD-211ENST00000604036 OR13G1Q8NGZ3 307 aa20.28■□□□□ 0.84
FOCAD-211ENST00000604036 SPRYD4Q8WW59 207 aaPredicted RBP20.28■□□□□ 0.84
FOCAD-211ENST00000604036 OR8B4Q96RC9 309 aa20.28■□□□□ 0.84
FOCAD-211ENST00000604036 TBX5Q99593 518 aa20.28■□□□□ 0.84
FOCAD-211ENST00000604036 BPESC1Q9GZL8 116 aa20.28■□□□□ 0.84
FOCAD-211ENST00000604036 OR10A2Q9H208 303 aa20.28■□□□□ 0.84
FOCAD-211ENST00000604036 GSX1Q9H4S2 264 aaPredicted RBP20.28■□□□□ 0.84
FOCAD-211ENST00000604036 CHODLQ9H9P2 273 aa20.28■□□□□ 0.84
FOCAD-211ENST00000604036 SETD2Q9BYW2 2564 aaPredicted RBP20.28■□□□□ 0.84
FOCAD-211ENST00000604036 IGHV1-69-2A0A0G2JMI3 117 aa20.27■□□□□ 0.84
FOCAD-211ENST00000604036 CD300LBA8K4G0 201 aa20.27■□□□□ 0.84
FOCAD-211ENST00000604036 PRR32B1ATL7 298 aa20.27■□□□□ 0.84
FOCAD-211ENST00000604036 CASQ2O14958 399 aaPredicted RBP20.27■□□□□ 0.84
FOCAD-211ENST00000604036 MPZL2O60487 215 aa20.27■□□□□ 0.84
FOCAD-211ENST00000604036 ZNF254O75437 659 aa20.27■□□□□ 0.84
FOCAD-211ENST00000604036 CD55P08174 381 aa20.27■□□□□ 0.84
FOCAD-211ENST00000604036 CRYBB2P43320 205 aa20.27■□□□□ 0.84
FOCAD-211ENST00000604036 ROM1Q03395 351 aa20.27■□□□□ 0.84
FOCAD-211ENST00000604036 RIN1Q13671 783 aa20.27■□□□□ 0.84
FOCAD-211ENST00000604036 RHOXF1Q8NHV9 184 aa20.27■□□□□ 0.84
FOCAD-211ENST00000604036 SGK3Q96BR1 496 aa20.27■□□□□ 0.84
FOCAD-211ENST00000604036 SLC30A2Q9BRI3 323 aa20.27■□□□□ 0.84
FOCAD-211ENST00000604036 OPA3Q9H6K4 179 aa20.27■□□□□ 0.84
FOCAD-211ENST00000604036 ZNF275Q9NSD4 429 aaPredicted RBP20.27■□□□□ 0.84
FOCAD-211ENST00000604036 TMEM100Q9NV29 134 aa20.27■□□□□ 0.84
FOCAD-211ENST00000604036 ZNF319Q9P2F9 582 aa20.27■□□□□ 0.84
FOCAD-211ENST00000604036 NKX1-2Q9UD57 310 aaPredicted RBP20.27■□□□□ 0.84
FOCAD-211ENST00000604036 A0A096LNT2 108 aa20.26■□□□□ 0.83
FOCAD-211ENST00000604036 OR2T7P0C7T2 308 aa20.26■□□□□ 0.83
FOCAD-211ENST00000604036 USF1P22415 310 aaPredicted RBP20.26■□□□□ 0.83
FOCAD-211ENST00000604036 MTNR1AP48039 350 aa20.26■□□□□ 0.83
FOCAD-211ENST00000604036 RIDAP52758 137 aaKnown RBP20.26■□□□□ 0.83
FOCAD-211ENST00000604036 PSMA6P60900 246 aaKnown RBP20.26■□□□□ 0.83
FOCAD-211ENST00000604036 LOXL1Q08397 574 aaPredicted RBP20.26■□□□□ 0.83
FOCAD-211ENST00000604036 GFOD2Q3B7J2 385 aa20.26■□□□□ 0.83
FOCAD-211ENST00000604036 KRTAP21-3Q3LHN1 58 aa20.26■□□□□ 0.83
FOCAD-211ENST00000604036 SPRNQ5BIV9 151 aa20.26■□□□□ 0.83
FOCAD-211ENST00000604036 OGFRL1Q5TC84 451 aaPredicted RBP20.26■□□□□ 0.83
FOCAD-211ENST00000604036 OR10H4Q8NGA5 316 aa20.26■□□□□ 0.83
FOCAD-211ENST00000604036 OR10AD1Q8NGE0 317 aa20.26■□□□□ 0.83
FOCAD-211ENST00000604036 OR2T27Q8NH04 317 aa20.26■□□□□ 0.83
FOCAD-211ENST00000604036 CYGBQ8WWM9 190 aa20.26■□□□□ 0.83
FOCAD-211ENST00000604036 SPSB4Q96A44 273 aa20.26■□□□□ 0.83
FOCAD-211ENST00000604036 REEP6Q96HR9 211 aa20.26■□□□□ 0.83
FOCAD-211ENST00000604036 APOL4Q9BPW4 351 aa20.26■□□□□ 0.83
FOCAD-211ENST00000604036 YLPM1P49750 1951 aaKnown RBP20.25■□□□□ 0.83
FOCAD-211ENST00000604036 SNTNA6NMZ2 147 aa20.25■□□□□ 0.83
FOCAD-211ENST00000604036 H0YL77 283 aa20.25■□□□□ 0.83
FOCAD-211ENST00000604036 MAGEB4O15481 346 aaPredicted RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms