RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 NXPH2O95156 264 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 CD46P15529 392 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 IRS1P35568 1242 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 TOMM34Q15785 309 aaPredicted RBP7.94□□□□□ -1.14
CSMD1-216ENST00000602557 RFLNAQ6ZTI6 216 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 RNF113BQ8IZP6 322 aaKnown RBP7.94□□□□□ -1.14
CSMD1-216ENST00000602557 UBTD2Q8WUN7 234 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 FGGYQ96C11 551 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 NOL4LQ96MY1 436 aaPredicted RBP7.94□□□□□ -1.14
CSMD1-216ENST00000602557 DUSP23Q9BVJ7 150 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 A4GALTQ9NPC4 353 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 MYOTQ9UBF9 498 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 RCL1Q9Y2P8 373 aaKnown RBP7.94□□□□□ -1.14
CSMD1-216ENST00000602557 HMX2A2RU54 273 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 A8MVM7 634 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 M0R1X1 148 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 ZNF93P35789 620 aaPredicted RBP7.93□□□□□ -1.14
CSMD1-216ENST00000602557 RFX2P48378 723 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 LBX1P52954 281 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 ZNF92Q03936 586 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 LINC00303Q3SY05 128 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 XAF1Q6GPH4 301 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 ZNF511Q8NB15 262 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 NTNG1Q9Y2I2 539 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 CTNSO60931 367 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 KDF1Q8NAX2 398 aaPredicted RBP7.93□□□□□ -1.14
CSMD1-216ENST00000602557 ARSGQ96EG1 525 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 ZDHHC5Q9C0B5 715 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 LRIT1Q9P2V4 623 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 COL11A1P12107 1806 aaPredicted RBP7.93□□□□□ -1.14
CSMD1-216ENST00000602557 KIAA1324LA8MWY0 1029 aaPredicted RBP7.93□□□□□ -1.14
CSMD1-216ENST00000602557 INPP5JQ15735 1006 aaPredicted RBP7.93□□□□□ -1.14
CSMD1-216ENST00000602557 FAM27D1Q5T7N8 215 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 LINC00518Q8N0U6 118 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 TMEM129A0AVI4 362 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 SLC25A6P12236 298 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 GSK3AP49840 483 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 RAB38P57729 211 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 DHODHQ02127 395 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 STUMQ69YW2 141 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 SMIM12Q96EX1 92 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 COL19A1Q14993 1142 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 FUNDC1Q8IVP5 155 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 IFI44Q8TCB0 444 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 PLA2G12AQ9BZM1 189 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 GLIPR2Q9H4G4 154 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 UBE2L5PA0A1B0GUS4 154 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 A0A1B0GWA3 101 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 PLRG1O43660 514 aaKnown RBP7.93□□□□□ -1.14
CSMD1-216ENST00000602557 SCRG1O75711 98 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 B3GALT4O96024 378 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 ADRA2CP18825 462 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 GUCA2AQ02747 115 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 GLIPR1L1Q6UWM5 242 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 SLC39A11Q8N1S5 342 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 MZB1Q8WU39 189 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 CALHM2Q9HA72 323 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 TRAPPC4Q9Y296 219 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.93□□□□□ -1.14
CSMD1-216ENST00000602557 TMEM184BQ9Y519 407 aaPredicted RBP7.93□□□□□ -1.14
CSMD1-216ENST00000602557 SNRPGP15A8MWD9 76 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 DEFA4P12838 97 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 ZNF17P17021 662 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 GNB4Q9HAV0 340 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 CD3DP04234 171 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 PPOXP50336 477 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 THEM4Q5T1C6 240 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 LYG2Q86SG7 212 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 LINC00469Q8N7U9 141 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 ZBTB42B2RXF5 422 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 OR8U8P0C7N1 319 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 BCL6P41182 706 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 ACOT6Q3I5F7 207 aaPredicted RBP7.93□□□□□ -1.14
CSMD1-216ENST00000602557 AAED1Q7RTV5 226 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 SLC22A24Q8N4F4 322 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 OR11L1Q8NGX0 322 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 CDCA3Q99618 268 aaPredicted RBP7.93□□□□□ -1.14
CSMD1-216ENST00000602557 CDCA4Q9BXL8 241 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 GABARAPL3Q9BY60 117 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 NECAP2Q9NVZ3 263 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 EID2Q8N6I1 236 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 CSF3RQ99062 836 aa7.93□□□□□ -1.14
CSMD1-216ENST00000602557 UTP23Q9BRU9 249 aaKnown RBP7.93□□□□□ -1.14
CSMD1-216ENST00000602557 FGF8P55075 233 aaPredicted RBP7.92□□□□□ -1.14
CSMD1-216ENST00000602557 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.92□□□□□ -1.14
CSMD1-216ENST00000602557 COL5A1-AS1Q5SY13 56 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 DPPA3Q6W0C5 159 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 OR51H1Q8NH63 302 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 NUDCD2Q8WVJ2 157 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 RBM38Q9H0Z9 239 aaKnown RBP7.92□□□□□ -1.14
CSMD1-216ENST00000602557 LHX6Q9UPM6 363 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 CSNK1EP49674 416 aaKnown RBP7.92□□□□□ -1.14
CSMD1-216ENST00000602557 CATR1Q13166 79 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 DPY19L2P2Q6ZN68 376 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 RBM14Q96PK6 669 aaKnown RBP7.92□□□□□ -1.14
CSMD1-216ENST00000602557 CHST8Q9H2A9 424 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 DECR2Q9NUI1 292 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 ANKRD10Q9NXR5 420 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 FKBP11Q9NYL4 201 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 OR52A1Q9UKL2 312 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms