RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 C11orf91Q3C1V1 193 aa13.78□□□□□ -0.2
USE1-208ENST00000600970 GPR139Q6DWJ6 353 aa13.78□□□□□ -0.2
USE1-208ENST00000600970 CFAP77Q6ZQR2 320 aa13.78□□□□□ -0.2
USE1-208ENST00000600970 Q6ZTK2 550 aa13.78□□□□□ -0.2
USE1-208ENST00000600970 VTCN1Q7Z7D3 282 aa13.78□□□□□ -0.2
USE1-208ENST00000600970 ADCK1Q86TW2 530 aa13.78□□□□□ -0.2
USE1-208ENST00000600970 FAM90A1Q86YD7 464 aa13.78□□□□□ -0.2
USE1-208ENST00000600970 FGFRL1Q8N441 504 aa13.78□□□□□ -0.2
USE1-208ENST00000600970 GALNT4Q8N4A0 578 aa13.78□□□□□ -0.2
USE1-208ENST00000600970 PLPP7Q8NBV4 271 aa13.78□□□□□ -0.2
USE1-208ENST00000600970 NPRL2Q8WTW4 380 aa13.78□□□□□ -0.2
USE1-208ENST00000600970 ST8SIA4Q92187 359 aa13.78□□□□□ -0.2
USE1-208ENST00000600970 GPX7Q96SL4 187 aaPredicted RBP13.78□□□□□ -0.2
USE1-208ENST00000600970 ADAT1Q9BUB4 502 aaKnown RBP13.78□□□□□ -0.2
USE1-208ENST00000600970 NDEL1Q9GZM8 345 aa13.78□□□□□ -0.2
USE1-208ENST00000600970 SLC22A4Q9H015 551 aa13.78□□□□□ -0.2
USE1-208ENST00000600970 FBLN5Q9UBX5 448 aa13.78□□□□□ -0.2
USE1-208ENST00000600970 RPUSD1Q9UJJ7 312 aaKnown RBP13.78□□□□□ -0.2
USE1-208ENST00000600970 NOP16Q9Y3C1 178 aaKnown RBP13.78□□□□□ -0.2
USE1-208ENST00000600970 IER3IP1Q9Y5U9 82 aa13.78□□□□□ -0.2
USE1-208ENST00000600970 FAM220BPB1ANY3 271 aa13.77□□□□□ -0.21
USE1-208ENST00000600970 GPR37O15354 613 aa13.77□□□□□ -0.21
USE1-208ENST00000600970 GMDSO60547 372 aa13.77□□□□□ -0.21
USE1-208ENST00000600970 LCATP04180 440 aa13.77□□□□□ -0.21
USE1-208ENST00000600970 MDH1P40925 334 aaKnown RBP13.77□□□□□ -0.21
USE1-208ENST00000600970 METAP1DQ6UB28 335 aaPredicted RBP13.77□□□□□ -0.21
USE1-208ENST00000600970 ZNF826PQ6ZT77 177 aa13.77□□□□□ -0.21
USE1-208ENST00000600970 MRPL21Q7Z2W9 205 aaKnown RBP13.77□□□□□ -0.21
USE1-208ENST00000600970 LINC00346Q8IVM7 164 aa13.77□□□□□ -0.21
USE1-208ENST00000600970 GCSAMQ8N6F7 178 aa13.77□□□□□ -0.21
USE1-208ENST00000600970 MRAPQ8TCY5 172 aa13.77□□□□□ -0.21
USE1-208ENST00000600970 LZICQ8WZA0 190 aa13.77□□□□□ -0.21
USE1-208ENST00000600970 FAM46AQ96IP4 442 aaKnown RBP13.77□□□□□ -0.21
USE1-208ENST00000600970 C1orf123Q9NWV4 160 aa13.77□□□□□ -0.21
USE1-208ENST00000600970 KAAG1Q9UBP8 84 aa13.77□□□□□ -0.21
USE1-208ENST00000600970 SIGLEC7Q9Y286 467 aa13.77□□□□□ -0.21
USE1-208ENST00000600970 IGHV3OR15-7A0A075B7D8 119 aa13.76□□□□□ -0.21
USE1-208ENST00000600970 IGLV1-36A0A0B4J1U3 117 aa13.76□□□□□ -0.21
USE1-208ENST00000600970 ANKRD61A6NGH8 418 aa13.76□□□□□ -0.21
USE1-208ENST00000600970 CD300LBA8K4G0 201 aa13.76□□□□□ -0.21
USE1-208ENST00000600970 PPP1R3DO95685 299 aa13.76□□□□□ -0.21
USE1-208ENST00000600970 GRPP07492 148 aa13.76□□□□□ -0.21
USE1-208ENST00000600970 CRABP1P29762 137 aa13.76□□□□□ -0.21
USE1-208ENST00000600970 PRB3Q04118 309 aaPredicted RBP13.76□□□□□ -0.21
USE1-208ENST00000600970 TRAP1Q12931 704 aaKnown RBP13.76□□□□□ -0.21
USE1-208ENST00000600970 AGBL2Q5U5Z8 902 aa13.76□□□□□ -0.21
USE1-208ENST00000600970 SLC18B1Q6NT16 456 aa13.76□□□□□ -0.21
USE1-208ENST00000600970 RRM2BQ7LG56 351 aa13.76□□□□□ -0.21
USE1-208ENST00000600970 LY6G5BQ8NDX9 201 aa13.76□□□□□ -0.21
USE1-208ENST00000600970 OR2T12Q8NG77 320 aa13.76□□□□□ -0.21
USE1-208ENST00000600970 DYDC1Q8WWB3 177 aa13.76□□□□□ -0.21
USE1-208ENST00000600970 PITX2Q99697 317 aa13.76□□□□□ -0.21
USE1-208ENST00000600970 ATF6BQ99941 703 aa13.76□□□□□ -0.21
USE1-208ENST00000600970 PPA2Q9H2U2 334 aa13.76□□□□□ -0.21
USE1-208ENST00000600970 SIRT7Q9NRC8 400 aa13.76□□□□□ -0.21
USE1-208ENST00000600970 ONECUT1Q9UBC0 465 aa13.76□□□□□ -0.21
USE1-208ENST00000600970 TMEM5Q9Y2B1 443 aa13.76□□□□□ -0.21
USE1-208ENST00000600970 A0A1B0GW55 424 aa13.75□□□□□ -0.21
USE1-208ENST00000600970 A0A1W2PRD5 423 aa13.75□□□□□ -0.21
USE1-208ENST00000600970 A0A1W2PRF3 423 aa13.75□□□□□ -0.21
USE1-208ENST00000600970 A0A1W2PRM7 423 aa13.75□□□□□ -0.21
USE1-208ENST00000600970 RNASEK-C17orf49H0YIS7 233 aa13.75□□□□□ -0.21
USE1-208ENST00000600970 MRASO14807 208 aa13.75□□□□□ -0.21
USE1-208ENST00000600970 NPFFO15130 113 aa13.75□□□□□ -0.21
USE1-208ENST00000600970 TXNDC12O95881 172 aa13.75□□□□□ -0.21
USE1-208ENST00000600970 NPPAP01160 153 aa13.75□□□□□ -0.21
USE1-208ENST00000600970 LHBP01229 141 aa13.75□□□□□ -0.21
USE1-208ENST00000600970 DUX4L2P0CJ85 424 aa13.75□□□□□ -0.21
USE1-208ENST00000600970 DUX4L3P0CJ86 424 aa13.75□□□□□ -0.21
USE1-208ENST00000600970 DUX4L4P0CJ87 422 aa13.75□□□□□ -0.21
USE1-208ENST00000600970 DUX4L5P0CJ88 424 aa13.75□□□□□ -0.21
USE1-208ENST00000600970 DUX4L6P0CJ89 424 aa13.75□□□□□ -0.21
USE1-208ENST00000600970 DUX4L7P0CJ90 424 aa13.75□□□□□ -0.21
USE1-208ENST00000600970 DLX1P56177 255 aa13.75□□□□□ -0.21
USE1-208ENST00000600970 FXYD6P3P58550 94 aa13.75□□□□□ -0.21
USE1-208ENST00000600970 DBPQ10586 325 aaPredicted RBP13.75□□□□□ -0.21
USE1-208ENST00000600970 ECH1Q13011 328 aa13.75□□□□□ -0.21
USE1-208ENST00000600970 TEX36Q5VZQ5 186 aa13.75□□□□□ -0.21
USE1-208ENST00000600970 DNM1P34Q6PK57 102 aa13.75□□□□□ -0.21
USE1-208ENST00000600970 DUX4L9Q6RFH8 374 aaPredicted RBP13.75□□□□□ -0.21
USE1-208ENST00000600970 SLC26A10Q8NG04 563 aa13.75□□□□□ -0.21
USE1-208ENST00000600970 PPP1R14AQ96A00 147 aa13.75□□□□□ -0.21
USE1-208ENST00000600970 SRA1Q9HD15 236 aaKnown RBP13.75□□□□□ -0.21
USE1-208ENST00000600970 PNRC2Q9NPJ4 139 aaKnown RBP13.75□□□□□ -0.21
USE1-208ENST00000600970 DUX4Q9UBX2 424 aa13.75□□□□□ -0.21
USE1-208ENST00000600970 B9D1Q9UPM9 204 aa13.75□□□□□ -0.21
USE1-208ENST00000600970 FOXJ3Q9UPW0 622 aa13.75□□□□□ -0.21
USE1-208ENST00000600970 AURKCQ9UQB9 309 aa13.75□□□□□ -0.21
USE1-208ENST00000600970 SIGLEC9Q9Y336 463 aa13.75□□□□□ -0.21
USE1-208ENST00000600970 RYR3Q15413 4870 aa13.75□□□□□ -0.21
USE1-208ENST00000600970 A6NLC8 198 aa13.74□□□□□ -0.21
USE1-208ENST00000600970 ANOS1P23352 680 aa13.74□□□□□ -0.21
USE1-208ENST00000600970 GABRA5P31644 462 aa13.74□□□□□ -0.21
USE1-208ENST00000600970 GGT2P36268 569 aa13.74□□□□□ -0.21
USE1-208ENST00000600970 RPS6KA3P51812 740 aa13.74□□□□□ -0.21
USE1-208ENST00000600970 EFNB2P52799 333 aa13.74□□□□□ -0.21
USE1-208ENST00000600970 LOXL3P58215 753 aa13.74□□□□□ -0.21
USE1-208ENST00000600970 ELF3P78545 371 aaPredicted RBP13.74□□□□□ -0.21
USE1-208ENST00000600970 GUCA2AQ02747 115 aa13.74□□□□□ -0.21
USE1-208ENST00000600970 ZNF92Q03936 586 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms