RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 ZNF92Q03936 586 aa23.89■■□□□ 1.41
SSBP4-206ENST00000599699 SLC16A9Q7RTY1 509 aa23.89■■□□□ 1.41
SSBP4-206ENST00000599699 ITLN1Q8WWA0 313 aa23.89■■□□□ 1.41
SSBP4-206ENST00000599699 OR2V2Q96R30 315 aa23.89■■□□□ 1.41
SSBP4-206ENST00000599699 GABARAPL3Q9BY60 117 aa23.89■■□□□ 1.41
SSBP4-206ENST00000599699 SP140LQ9H930 580 aa23.89■■□□□ 1.41
SSBP4-206ENST00000599699 S100A14Q9HCY8 104 aa23.89■■□□□ 1.41
SSBP4-206ENST00000599699 IL19Q9UHD0 177 aa23.89■■□□□ 1.41
SSBP4-206ENST00000599699 C5orf63A6NC05 138 aa23.88■■□□□ 1.41
SSBP4-206ENST00000599699 CCDC182A6NF36 153 aa23.88■■□□□ 1.41
SSBP4-206ENST00000599699 GGT3PA6NGU5 568 aa23.88■■□□□ 1.41
SSBP4-206ENST00000599699 HCCSP53701 268 aa23.88■■□□□ 1.41
SSBP4-206ENST00000599699 SLC3A1Q07837 685 aa23.88■■□□□ 1.41
SSBP4-206ENST00000599699 RHOUQ7L0Q8 258 aa23.88■■□□□ 1.41
SSBP4-206ENST00000599699 MEPCEQ7L2J0 689 aaKnown RBP23.88■■□□□ 1.41
SSBP4-206ENST00000599699 CLDND2Q8NHS1 167 aa23.88■■□□□ 1.41
SSBP4-206ENST00000599699 RAB1CQ92928 201 aa23.88■■□□□ 1.41
SSBP4-206ENST00000599699 SLC30A2Q9BRI3 323 aa23.88■■□□□ 1.41
SSBP4-206ENST00000599699 YIPF3Q9GZM5 350 aa23.88■■□□□ 1.41
SSBP4-206ENST00000599699 BRD7Q9NPI1 651 aa23.88■■□□□ 1.41
SSBP4-206ENST00000599699 KLHDC2Q9Y2U9 406 aa23.88■■□□□ 1.41
SSBP4-206ENST00000599699 SONP18583 2426 aaKnown RBP23.87■■□□□ 1.41
SSBP4-206ENST00000599699 H0YL77 283 aa23.87■■□□□ 1.41
SSBP4-206ENST00000599699 EI24O14681 340 aa23.87■■□□□ 1.41
SSBP4-206ENST00000599699 WNT9BO14905 357 aa23.87■■□□□ 1.41
SSBP4-206ENST00000599699 ANOS1P23352 680 aa23.87■■□□□ 1.41
SSBP4-206ENST00000599699 FAM166AQ6J272 317 aa23.87■■□□□ 1.41
SSBP4-206ENST00000599699 FAM57BQ71RH2 274 aa23.87■■□□□ 1.41
SSBP4-206ENST00000599699 PEG10Q86TG7 708 aaKnown RBP23.87■■□□□ 1.41
SSBP4-206ENST00000599699 POM121Q96HA1 1249 aa23.87■■□□□ 1.41
SSBP4-206ENST00000599699 SOX7Q9BT81 388 aa23.87■■□□□ 1.41
SSBP4-206ENST00000599699 CD300LBA8K4G0 201 aa23.86■■□□□ 1.41
SSBP4-206ENST00000599699 XRCC2O43543 280 aa23.86■■□□□ 1.41
SSBP4-206ENST00000599699 TGFAP01135 160 aa23.86■■□□□ 1.41
SSBP4-206ENST00000599699 ZNF121P58317 390 aaPredicted RBP23.86■■□□□ 1.41
SSBP4-206ENST00000599699 TIGD6Q17RP2 521 aa23.86■■□□□ 1.41
SSBP4-206ENST00000599699 NXNL2Q5VZ03 156 aa23.86■■□□□ 1.41
SSBP4-206ENST00000599699 LRRN1Q6UXK5 716 aa23.86■■□□□ 1.41
SSBP4-206ENST00000599699 KRT77Q7Z794 578 aa23.86■■□□□ 1.41
SSBP4-206ENST00000599699 CNN2Q99439 309 aaKnown RBP23.86■■□□□ 1.41
SSBP4-206ENST00000599699 REPIN1Q9BWE0 567 aaKnown RBP23.86■■□□□ 1.41
SSBP4-206ENST00000599699 PPP1R3CQ9UQK1 317 aa23.86■■□□□ 1.41
SSBP4-206ENST00000599699 WIPI2Q9Y4P8 454 aa23.86■■□□□ 1.41
SSBP4-206ENST00000599699 SLC22A31A6NKX4 558 aa23.85■■□□□ 1.41
SSBP4-206ENST00000599699 HLA-DPB1P04440 258 aa23.85■■□□□ 1.41
SSBP4-206ENST00000599699 ALPLP05186 524 aa23.85■■□□□ 1.41
SSBP4-206ENST00000599699 ALOX5APP20292 161 aa23.85■■□□□ 1.41
SSBP4-206ENST00000599699 SRP9P49458 86 aaKnown RBP23.85■■□□□ 1.41
SSBP4-206ENST00000599699 RAD23AP54725 363 aa23.85■■□□□ 1.41
SSBP4-206ENST00000599699 EFNB1P98172 346 aa23.85■■□□□ 1.41
SSBP4-206ENST00000599699 AADACL4Q5VUY2 407 aa23.85■■□□□ 1.41
SSBP4-206ENST00000599699 GID4Q8IVV7 300 aa23.85■■□□□ 1.41
SSBP4-206ENST00000599699 CBR4Q8N4T8 237 aa23.85■■□□□ 1.41
SSBP4-206ENST00000599699 STMN2Q93045 179 aa23.85■■□□□ 1.41
SSBP4-206ENST00000599699 PGAM5Q96HS1 289 aa23.85■■□□□ 1.41
SSBP4-206ENST00000599699 OPA3Q9H6K4 179 aa23.85■■□□□ 1.41
SSBP4-206ENST00000599699 TMEM106BQ9NUM4 274 aa23.85■■□□□ 1.41
SSBP4-206ENST00000599699 KCNS2Q9ULS6 477 aa23.85■■□□□ 1.41
SSBP4-206ENST00000599699 ISPDA4D126 451 aa23.84■■□□□ 1.41
SSBP4-206ENST00000599699 F5H5P2 479 aa23.84■■□□□ 1.41
SSBP4-206ENST00000599699 MLNRO43193 412 aa23.84■■□□□ 1.41
SSBP4-206ENST00000599699 ALDH3A2P51648 485 aa23.84■■□□□ 1.41
SSBP4-206ENST00000599699 HNRNPA0Q13151 305 aaKnown RBP23.84■■□□□ 1.41
SSBP4-206ENST00000599699 GFOD2Q3B7J2 385 aa23.84■■□□□ 1.41
SSBP4-206ENST00000599699 KCTD18Q6PI47 426 aaPredicted RBP23.84■■□□□ 1.41
SSBP4-206ENST00000599699 LINC01356Q8N9X3 169 aa23.84■■□□□ 1.41
SSBP4-206ENST00000599699 OR52H1Q8NGJ2 320 aa23.84■■□□□ 1.41
SSBP4-206ENST00000599699 MEGF10Q96KG7 1140 aa23.84■■□□□ 1.41
SSBP4-206ENST00000599699 OR10A2Q9H208 303 aa23.84■■□□□ 1.41
SSBP4-206ENST00000599699 USE1Q9NZ43 259 aa23.84■■□□□ 1.41
SSBP4-206ENST00000599699 TMEM14AQ9Y6G1 99 aa23.84■■□□□ 1.41
SSBP4-206ENST00000599699 YLPM1P49750 1951 aaKnown RBP23.83■■□□□ 1.41
SSBP4-206ENST00000599699 IGHV3-64DA0A0J9YX35 117 aa23.83■■□□□ 1.41
SSBP4-206ENST00000599699 LMX1BO60663 402 aa23.83■■□□□ 1.41
SSBP4-206ENST00000599699 CRLF1O75462 422 aa23.83■■□□□ 1.41
SSBP4-206ENST00000599699 BAG2O95816 211 aa23.83■■□□□ 1.41
SSBP4-206ENST00000599699 CA6P23280 308 aa23.83■■□□□ 1.41
SSBP4-206ENST00000599699 CDC42P60953 191 aa23.83■■□□□ 1.41
SSBP4-206ENST00000599699 ZIK1Q3SY52 487 aaPredicted RBP23.83■■□□□ 1.41
SSBP4-206ENST00000599699 REEP6Q96HR9 211 aa23.83■■□□□ 1.41
SSBP4-206ENST00000599699 C9orf16Q9BUW7 83 aa23.83■■□□□ 1.41
SSBP4-206ENST00000599699 IMPAD1Q9NX62 359 aa23.83■■□□□ 1.41
SSBP4-206ENST00000599699 OR8G1Q15617 311 aa23.82■■□□□ 1.4
SSBP4-206ENST00000599699 ZNF771Q7L3S4 317 aaPredicted RBP23.82■■□□□ 1.4
SSBP4-206ENST00000599699 PQLC1Q8N2U9 271 aa23.82■■□□□ 1.4
SSBP4-206ENST00000599699 SGK3Q96BR1 496 aa23.82■■□□□ 1.4
SSBP4-206ENST00000599699 TTTY10Q9BZA0 68 aa23.82■■□□□ 1.4
SSBP4-206ENST00000599699 SLC22A4Q9H015 551 aa23.82■■□□□ 1.4
SSBP4-206ENST00000599699 NIPAL2Q9H841 368 aa23.82■■□□□ 1.4
SSBP4-206ENST00000599699 DCAF16Q9NXF7 216 aa23.82■■□□□ 1.4
SSBP4-206ENST00000599699 NOP16Q9Y3C1 178 aaKnown RBP23.82■■□□□ 1.4
SSBP4-206ENST00000599699 LRP12Q9Y561 859 aa23.82■■□□□ 1.4
SSBP4-206ENST00000599699 NAV3Q8IVL0 2385 aa23.81■■□□□ 1.4
SSBP4-206ENST00000599699 PSMD9O00233 223 aa23.81■■□□□ 1.4
SSBP4-206ENST00000599699 RBMXP38159 391 aaKnown RBP23.81■■□□□ 1.4
SSBP4-206ENST00000599699 CDH15P55291 814 aa23.81■■□□□ 1.4
SSBP4-206ENST00000599699 PRSS45Q7RTY3 260 aa23.81■■□□□ 1.4
SSBP4-206ENST00000599699 OR56B2PQ8NGI1 322 aa23.81■■□□□ 1.4
SSBP4-206ENST00000599699 OR8J1Q8NGP2 316 aa23.81■■□□□ 1.4
SSBP4-206ENST00000599699 FAM81AQ8TBF8 368 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms