RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 OR2AJ1Q8NGZ0 328 aa17.56■□□□□ 0.4
PNKP-212ENST00000599454 SLCO4A1Q96BD0 722 aa17.56■□□□□ 0.4
PNKP-212ENST00000599454 TBX15Q96SF7 602 aa17.56■□□□□ 0.4
PNKP-212ENST00000599454 SRA1Q9HD15 236 aaKnown RBP17.56■□□□□ 0.4
PNKP-212ENST00000599454 UFSP2Q9NUQ7 469 aa17.56■□□□□ 0.4
PNKP-212ENST00000599454 ACOXLQ9NUZ1 547 aa17.56■□□□□ 0.4
PNKP-212ENST00000599454 NDUFAF4Q9P032 175 aa17.56■□□□□ 0.4
PNKP-212ENST00000599454 CTSZQ9UBR2 303 aa17.56■□□□□ 0.4
PNKP-212ENST00000599454 CENPVL3A0A0U1RRI6 287 aa17.55■□□□□ 0.4
PNKP-212ENST00000599454 GMDSO60547 372 aa17.55■□□□□ 0.4
PNKP-212ENST00000599454 SLC6A6P31641 620 aa17.55■□□□□ 0.4
PNKP-212ENST00000599454 TPTEP56180 551 aa17.55■□□□□ 0.4
PNKP-212ENST00000599454 MPPED2Q15777 294 aa17.55■□□□□ 0.4
PNKP-212ENST00000599454 CGB2Q6NT52 195 aa17.55■□□□□ 0.4
PNKP-212ENST00000599454 ZBTB46Q86UZ6 589 aa17.55■□□□□ 0.4
PNKP-212ENST00000599454 LINC00346Q8IVM7 164 aa17.55■□□□□ 0.4
PNKP-212ENST00000599454 C19orf18Q8NEA5 215 aa17.55■□□□□ 0.4
PNKP-212ENST00000599454 FANK1Q8TC84 345 aa17.55■□□□□ 0.4
PNKP-212ENST00000599454 DHRS1Q96LJ7 313 aa17.55■□□□□ 0.4
PNKP-212ENST00000599454 WDFY2Q96P53 400 aa17.55■□□□□ 0.4
PNKP-212ENST00000599454 CYB5R1Q9UHQ9 305 aa17.55■□□□□ 0.4
PNKP-212ENST00000599454 KCNG2Q9UJ96 466 aa17.55■□□□□ 0.4
PNKP-212ENST00000599454 TRAV38-1A0A0B4J264 116 aa17.54■□□□□ 0.4
PNKP-212ENST00000599454 TRBV4-1A0A0J9YWV2 114 aa17.54■□□□□ 0.4
PNKP-212ENST00000599454 PRSS12P56730 875 aa17.54■□□□□ 0.4
PNKP-212ENST00000599454 SF3A3Q12874 501 aaKnown RBP eCLIP17.54■□□□□ 0.42e-6■■□□□ 14
PNKP-212ENST00000599454 SEC23BQ15437 767 aa17.54■□□□□ 0.4
PNKP-212ENST00000599454 RFX4Q33E94 735 aa17.54■□□□□ 0.4
PNKP-212ENST00000599454 C8orf82Q6P1X6 216 aaPredicted RBP17.54■□□□□ 0.4
PNKP-212ENST00000599454 NMNAT3Q96T66 252 aa17.54■□□□□ 0.4
PNKP-212ENST00000599454 KCTD14Q9BQ13 255 aaPredicted RBP17.54■□□□□ 0.4
PNKP-212ENST00000599454 PNRC2Q9NPJ4 139 aaKnown RBP17.54■□□□□ 0.4
PNKP-212ENST00000599454 ARMCX1Q9P291 453 aa17.54■□□□□ 0.4
PNKP-212ENST00000599454 IGHV1-69DA0A0B4J2H0 117 aa17.53■□□□□ 0.4
PNKP-212ENST00000599454 CD300LBA8K4G0 201 aa17.53■□□□□ 0.4
PNKP-212ENST00000599454 M0R135 149 aa17.53■□□□□ 0.4
PNKP-212ENST00000599454 ADAM20O43506 726 aa17.53■□□□□ 0.4
PNKP-212ENST00000599454 IGHV1-69P01742 117 aa17.53■□□□□ 0.4
PNKP-212ENST00000599454 COX4I1P13073 169 aa17.53■□□□□ 0.4
PNKP-212ENST00000599454 CA6P23280 308 aa17.53■□□□□ 0.4
PNKP-212ENST00000599454 GGT2P36268 569 aa17.53■□□□□ 0.4
PNKP-212ENST00000599454 KRT72Q14CN4 511 aa17.53■□□□□ 0.4
PNKP-212ENST00000599454 OR8B8Q15620 311 aa17.53■□□□□ 0.4
PNKP-212ENST00000599454 HACD2Q6Y1H2 254 aa17.53■□□□□ 0.4
PNKP-212ENST00000599454 RHOUQ7L0Q8 258 aa17.53■□□□□ 0.4
PNKP-212ENST00000599454 NAA40Q86UY6 237 aa17.53■□□□□ 0.4
PNKP-212ENST00000599454 SPERTQ8NA61 448 aa17.53■□□□□ 0.4
PNKP-212ENST00000599454 SPTSSAQ969W0 71 aa17.53■□□□□ 0.4
PNKP-212ENST00000599454 ZNF799Q96GE5 643 aa17.53■□□□□ 0.4
PNKP-212ENST00000599454 FUZQ9BT04 418 aa17.53■□□□□ 0.4
PNKP-212ENST00000599454 ADAT1Q9BUB4 502 aaKnown RBP17.53■□□□□ 0.4
PNKP-212ENST00000599454 OR52D1Q9H346 318 aa17.53■□□□□ 0.4
PNKP-212ENST00000599454 EFCAB1Q9HAE3 211 aa17.53■□□□□ 0.4
PNKP-212ENST00000599454 RPRD1BQ9NQG5 326 aaKnown RBP17.53■□□□□ 0.4
PNKP-212ENST00000599454 ARGLU1Q9NWB6 273 aaPredicted RBP17.53■□□□□ 0.4
PNKP-212ENST00000599454 SAMD4AQ9UPU9 718 aaKnown RBP17.53■□□□□ 0.4
PNKP-212ENST00000599454 RNF114Q9Y508 228 aa17.53■□□□□ 0.4
PNKP-212ENST00000599454 OOEPA6NGQ2 149 aa17.52■□□□□ 0.4
PNKP-212ENST00000599454 IDH3BO43837 385 aa17.52■□□□□ 0.4
PNKP-212ENST00000599454 CLPXO76031 633 aa17.52■□□□□ 0.4
PNKP-212ENST00000599454 ECDO95905 644 aaPredicted RBP17.52■□□□□ 0.4
PNKP-212ENST00000599454 HLA-DQA2P01906 255 aa17.52■□□□□ 0.4
PNKP-212ENST00000599454 NCK1P16333 377 aa17.52■□□□□ 0.4
PNKP-212ENST00000599454 HIST1H1CP16403 213 aaKnown RBP17.52■□□□□ 0.4
PNKP-212ENST00000599454 SMIM11AP58511 58 aa17.52■□□□□ 0.4
PNKP-212ENST00000599454 MZT1Q08AG7 82 aa17.52■□□□□ 0.4
PNKP-212ENST00000599454 SFRP4Q6FHJ7 346 aaPredicted RBP17.52■□□□□ 0.4
PNKP-212ENST00000599454 LDLRAD3Q86YD5 345 aa17.52■□□□□ 0.4
PNKP-212ENST00000599454 OR4K13Q8NH42 304 aa17.52■□□□□ 0.4
PNKP-212ENST00000599454 C7orf34Q96L11 122 aa17.52■□□□□ 0.4
PNKP-212ENST00000599454 SIRPDQ9H106 197 aa17.52■□□□□ 0.4
PNKP-212ENST00000599454 MRPL15Q9P015 296 aaKnown RBP17.52■□□□□ 0.4
PNKP-212ENST00000599454 C3orf80F5H4A9 247 aa17.51■□□□□ 0.39
PNKP-212ENST00000599454 GPR137BO60478 399 aa17.51■□□□□ 0.39
PNKP-212ENST00000599454 NOS3P29474 1203 aa17.51■□□□□ 0.39
PNKP-212ENST00000599454 BOLLQ8N9W6 283 aaKnown RBP17.51■□□□□ 0.39
PNKP-212ENST00000599454 OR52J3Q8NH60 311 aa17.51■□□□□ 0.39
PNKP-212ENST00000599454 UBE2FQ969M7 185 aa17.51■□□□□ 0.39
PNKP-212ENST00000599454 RBM4BQ9BQ04 359 aaKnown RBP17.51■□□□□ 0.39
PNKP-212ENST00000599454 IFT27Q9BW83 186 aa17.51■□□□□ 0.39
PNKP-212ENST00000599454 SMURF1Q9HCE7 757 aa17.51■□□□□ 0.39
PNKP-212ENST00000599454 GGT3PA6NGU5 568 aa17.5■□□□□ 0.39
PNKP-212ENST00000599454 ZNF823P16415 610 aa17.5■□□□□ 0.39
PNKP-212ENST00000599454 IER3P46695 156 aa17.5■□□□□ 0.39
PNKP-212ENST00000599454 ZNF92Q03936 586 aa17.5■□□□□ 0.39
PNKP-212ENST00000599454 ASPHD2Q6ICH7 369 aa17.5■□□□□ 0.39
PNKP-212ENST00000599454 GDPGP1Q6ZNW5 385 aa17.5■□□□□ 0.39
PNKP-212ENST00000599454 SCCPDHQ8NBX0 429 aa17.5■□□□□ 0.39
PNKP-212ENST00000599454 LINC01006Q8NI28 216 aa17.5■□□□□ 0.39
PNKP-212ENST00000599454 LRTOMTQ8WZ04 291 aa17.5■□□□□ 0.39
PNKP-212ENST00000599454 LHX4Q969G2 390 aa17.5■□□□□ 0.39
PNKP-212ENST00000599454 MAP6Q96JE9 813 aa17.5■□□□□ 0.39
PNKP-212ENST00000599454 OPA3Q9H6K4 179 aa17.5■□□□□ 0.39
PNKP-212ENST00000599454 DCAF13Q9NV06 445 aaKnown RBP17.5■□□□□ 0.39
PNKP-212ENST00000599454 MRPL22Q9NWU5 206 aaKnown RBP17.5■□□□□ 0.39
PNKP-212ENST00000599454 ABCD2Q9UBJ2 740 aa17.5■□□□□ 0.39
PNKP-212ENST00000599454 KAAG1Q9UBP8 84 aa17.5■□□□□ 0.39
PNKP-212ENST00000599454 PRKDCP78527 4128 aaKnown RBP17.5■□□□□ 0.39
PNKP-212ENST00000599454 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.49■□□□□ 0.39
PNKP-212ENST00000599454 OR6C68A6NDL8 312 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms