RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 RHOXF1Q8NHV9 184 aa16.77■□□□□ 0.28
SHKBP1-214ENST00000597396 UBASH3BQ8TF42 649 aa16.77■□□□□ 0.28
SHKBP1-214ENST00000597396 FAM168AQ92567 244 aa16.77■□□□□ 0.28
SHKBP1-214ENST00000597396 RNFT2Q96EX2 444 aa16.77■□□□□ 0.28
SHKBP1-214ENST00000597396 MSL2Q9HCI7 577 aa16.77■□□□□ 0.28
SHKBP1-214ENST00000597396 TRIM64A6NGJ6 449 aa16.76■□□□□ 0.27
SHKBP1-214ENST00000597396 TRIM64BA6NI03 449 aa16.76■□□□□ 0.27
SHKBP1-214ENST00000597396 ZSCAN5BA6NJL1 495 aa16.76■□□□□ 0.27
SHKBP1-214ENST00000597396 ZNF254O75437 659 aa16.76■□□□□ 0.27
SHKBP1-214ENST00000597396 OR2T7P0C7T2 308 aa16.76■□□□□ 0.27
SHKBP1-214ENST00000597396 MAGEB1P43366 347 aa16.76■□□□□ 0.27
SHKBP1-214ENST00000597396 PRSS12P56730 875 aa16.76■□□□□ 0.27
SHKBP1-214ENST00000597396 PSMA6P60900 246 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-214ENST00000597396 CCL8P80075 99 aa16.76■□□□□ 0.27
SHKBP1-214ENST00000597396 ROM1Q03395 351 aa16.76■□□□□ 0.27
SHKBP1-214ENST00000597396 TNK1Q13470 666 aa16.76■□□□□ 0.27
SHKBP1-214ENST00000597396 TSTQ16762 297 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-214ENST00000597396 SETD9Q8NE22 299 aa16.76■□□□□ 0.27
SHKBP1-214ENST00000597396 OR52H1Q8NGJ2 320 aa16.76■□□□□ 0.27
SHKBP1-214ENST00000597396 OR2T27Q8NH04 317 aa16.76■□□□□ 0.27
SHKBP1-214ENST00000597396 ADI1Q9BV57 179 aa16.76■□□□□ 0.27
SHKBP1-214ENST00000597396 OR10A2Q9H208 303 aa16.76■□□□□ 0.27
SHKBP1-214ENST00000597396 OPA3Q9H6K4 179 aa16.76■□□□□ 0.27
SHKBP1-214ENST00000597396 DECR2Q9NUI1 292 aa16.76■□□□□ 0.27
SHKBP1-214ENST00000597396 NKIRAS2Q9NYR9 191 aa16.76■□□□□ 0.27
SHKBP1-214ENST00000597396 ZDHHC8Q9ULC8 765 aa16.76■□□□□ 0.27
SHKBP1-214ENST00000597396 TANC2Q9HCD6 1990 aa16.76■□□□□ 0.27
SHKBP1-214ENST00000597396 C5orf63A6NC05 138 aa16.75■□□□□ 0.27
SHKBP1-214ENST00000597396 GGT3PA6NGU5 568 aa16.75■□□□□ 0.27
SHKBP1-214ENST00000597396 IQCF6A8MYZ5 107 aa16.75■□□□□ 0.27
SHKBP1-214ENST00000597396 PRR32B1ATL7 298 aa16.75■□□□□ 0.27
SHKBP1-214ENST00000597396 NCR1O76036 304 aa16.75■□□□□ 0.27
SHKBP1-214ENST00000597396 CLIC3O95833 236 aa16.75■□□□□ 0.27
SHKBP1-214ENST00000597396 IGHV1-46P01743 117 aa16.75■□□□□ 0.27
SHKBP1-214ENST00000597396 HPXP02790 462 aa16.75■□□□□ 0.27
SHKBP1-214ENST00000597396 ANOS1P23352 680 aa16.75■□□□□ 0.27
SHKBP1-214ENST00000597396 ZNF92Q03936 586 aa16.75■□□□□ 0.27
SHKBP1-214ENST00000597396 GFOD2Q3B7J2 385 aa16.75■□□□□ 0.27
SHKBP1-214ENST00000597396 FAM209AQ5JX71 171 aa16.75■□□□□ 0.27
SHKBP1-214ENST00000597396 ZNF691Q5VV52 312 aa16.75■□□□□ 0.27
SHKBP1-214ENST00000597396 DNM1P46Q6ZS02 220 aa16.75■□□□□ 0.27
SHKBP1-214ENST00000597396 BHLHE23Q8NDY6 225 aa16.75■□□□□ 0.27
SHKBP1-214ENST00000597396 SPRYD4Q8WW59 207 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-214ENST00000597396 DIRC2Q96SL1 478 aa16.75■□□□□ 0.27
SHKBP1-214ENST00000597396 CR1P17927 2039 aa16.75■□□□□ 0.27
SHKBP1-214ENST00000597396 DYSFO75923 2080 aa16.74■□□□□ 0.27
SHKBP1-214ENST00000597396 FLNAP21333 2647 aaKnown RBP16.74■□□□□ 0.27
SHKBP1-214ENST00000597396 H7C1Q1 480 aa16.74■□□□□ 0.27
SHKBP1-214ENST00000597396 KRT8P05787 483 aa16.74■□□□□ 0.27
SHKBP1-214ENST00000597396 TNFSF4P23510 183 aa16.74■□□□□ 0.27
SHKBP1-214ENST00000597396 CAPGP40121 348 aa16.74■□□□□ 0.27
SHKBP1-214ENST00000597396 ADARB1P78563 741 aaKnown RBP16.74■□□□□ 0.27
SHKBP1-214ENST00000597396 ZNF91Q05481 1191 aa16.74■□□□□ 0.27
SHKBP1-214ENST00000597396 EGR3Q06889 387 aa16.74■□□□□ 0.27
SHKBP1-214ENST00000597396 ZNF829Q3KNS6 432 aaPredicted RBP16.74■□□□□ 0.27
SHKBP1-214ENST00000597396 PRSS45Q7RTY3 260 aa16.74■□□□□ 0.27
SHKBP1-214ENST00000597396 OR8G5Q8NG78 346 aa16.74■□□□□ 0.27
SHKBP1-214ENST00000597396 NRG4Q8WWG1 115 aa16.74■□□□□ 0.27
SHKBP1-214ENST00000597396 REEP6Q96HR9 211 aa16.74■□□□□ 0.27
SHKBP1-214ENST00000597396 REPIN1Q9BWE0 567 aaKnown RBP16.74■□□□□ 0.27
SHKBP1-214ENST00000597396 EGLN1Q9GZT9 426 aa16.74■□□□□ 0.27
SHKBP1-214ENST00000597396 VCX3BQ9H321 246 aa16.74■□□□□ 0.27
SHKBP1-214ENST00000597396 SAP30LQ9HAJ7 183 aa16.74■□□□□ 0.27
SHKBP1-214ENST00000597396 IGHV4-30-2A0A087WSY4 118 aa16.73■□□□□ 0.27
SHKBP1-214ENST00000597396 TMEM269A0A1B0GVZ9 245 aa16.73■□□□□ 0.27
SHKBP1-214ENST00000597396 LOC390937A0A1W2PQ73 354 aa16.73■□□□□ 0.27
SHKBP1-214ENST00000597396 A0A1W2PQL4 384 aaPredicted RBP16.73■□□□□ 0.27
SHKBP1-214ENST00000597396 H0YAE9 185 aa16.73■□□□□ 0.27
SHKBP1-214ENST00000597396 MAGEB4O15481 346 aaPredicted RBP16.73■□□□□ 0.27
SHKBP1-214ENST00000597396 ADH4P08319 380 aa16.73■□□□□ 0.27
SHKBP1-214ENST00000597396 DBTP11182 482 aaKnown RBP16.73■□□□□ 0.27
SHKBP1-214ENST00000597396 CFL1P23528 166 aaKnown RBP16.73■□□□□ 0.27
SHKBP1-214ENST00000597396 DCTDP32321 178 aa16.73■□□□□ 0.27
SHKBP1-214ENST00000597396 ACTC1P68032 377 aa16.73■□□□□ 0.27
SHKBP1-214ENST00000597396 ACTA1P68133 377 aa16.73■□□□□ 0.27
SHKBP1-214ENST00000597396 TNFAIP6P98066 277 aaPredicted RBP16.73■□□□□ 0.27
SHKBP1-214ENST00000597396 CDK5R2Q13319 367 aa16.73■□□□□ 0.27
SHKBP1-214ENST00000597396 IL18R1Q13478 541 aa16.73■□□□□ 0.27
SHKBP1-214ENST00000597396 Q6ZR03 302 aa16.73■□□□□ 0.27
SHKBP1-214ENST00000597396 SSX6Q7RTT6 188 aa16.73■□□□□ 0.27
SHKBP1-214ENST00000597396 ZNF786Q8N393 782 aa16.73■□□□□ 0.27
SHKBP1-214ENST00000597396 YIPF7Q8N8F6 280 aa16.73■□□□□ 0.27
SHKBP1-214ENST00000597396 OR2Z1Q8NG97 314 aa16.73■□□□□ 0.27
SHKBP1-214ENST00000597396 OR13G1Q8NGZ3 307 aa16.73■□□□□ 0.27
SHKBP1-214ENST00000597396 C10orf105Q8TEF2 133 aa16.73■□□□□ 0.27
SHKBP1-214ENST00000597396 APH1BQ8WW43 257 aa16.73■□□□□ 0.27
SHKBP1-214ENST00000597396 RDH5Q92781 318 aa16.73■□□□□ 0.27
SHKBP1-214ENST00000597396 ELMOD3Q96FG2 381 aa16.73■□□□□ 0.27
SHKBP1-214ENST00000597396 POM121Q96HA1 1249 aa16.73■□□□□ 0.27
SHKBP1-214ENST00000597396 PIMREGQ9BSJ6 248 aa16.73■□□□□ 0.27
SHKBP1-214ENST00000597396 AMBNQ9NP70 447 aa16.73■□□□□ 0.27
SHKBP1-214ENST00000597396 GTF2A1LQ9UNN4 478 aa16.73■□□□□ 0.27
SHKBP1-214ENST00000597396 PCDHGB1Q9Y5G3 927 aa16.73■□□□□ 0.27
SHKBP1-214ENST00000597396 CD300LBA8K4G0 201 aa16.72■□□□□ 0.27
SHKBP1-214ENST00000597396 RNF223E7ERA6 249 aa16.72■□□□□ 0.27
SHKBP1-214ENST00000597396 LYNX1G3V0Z9 82 aa16.72■□□□□ 0.27
SHKBP1-214ENST00000597396 NDUFS8O00217 210 aa16.72■□□□□ 0.27
SHKBP1-214ENST00000597396 LYNX1P0DP58 116 aa16.72■□□□□ 0.27
SHKBP1-214ENST00000597396 SLC25A16P16260 332 aa16.72■□□□□ 0.27
SHKBP1-214ENST00000597396 C8orf59Q8N0T1 100 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms