RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 DCAF12L2Q5VW00 463 aa8.85□□□□□ -0.99
CCDC9-203ENST00000596938 MRPL21Q7Z2W9 205 aaKnown RBP8.85□□□□□ -0.99
CCDC9-203ENST00000596938 SPATA24Q86W54 205 aa8.85□□□□□ -0.99
CCDC9-203ENST00000596938 MUC20Q8N307 709 aaPredicted RBP8.85□□□□□ -0.99
CCDC9-203ENST00000596938 PLPP7Q8NBV4 271 aa8.85□□□□□ -0.99
CCDC9-203ENST00000596938 OR10AD1Q8NGE0 317 aa8.85□□□□□ -0.99
CCDC9-203ENST00000596938 OR6K6Q8NGW6 343 aa8.85□□□□□ -0.99
CCDC9-203ENST00000596938 SPRYD4Q8WW59 207 aaPredicted RBP8.85□□□□□ -0.99
CCDC9-203ENST00000596938 NRBF2Q96F24 287 aa8.85□□□□□ -0.99
CCDC9-203ENST00000596938 COPS4Q9BT78 406 aa8.85□□□□□ -0.99
CCDC9-203ENST00000596938 TMPRSS13Q9BYE2 586 aa8.85□□□□□ -0.99
CCDC9-203ENST00000596938 OPA3Q9H6K4 179 aa8.85□□□□□ -0.99
CCDC9-203ENST00000596938 METTL17Q9H7H0 456 aaPredicted RBP8.85□□□□□ -0.99
CCDC9-203ENST00000596938 CENPMQ9NSP4 180 aa8.85□□□□□ -0.99
CCDC9-203ENST00000596938 UBAP1Q9NZ09 502 aa8.85□□□□□ -0.99
CCDC9-203ENST00000596938 LRRC30A6NM36 301 aa8.84□□□□□ -0.99
CCDC9-203ENST00000596938 ZNF878C9JN71 531 aa8.84□□□□□ -0.99
CCDC9-203ENST00000596938 F5H0A9 414 aaPredicted RBP8.84□□□□□ -0.99
CCDC9-203ENST00000596938 GMDSO60547 372 aa8.84□□□□□ -0.99
CCDC9-203ENST00000596938 FKBP6O75344 327 aa8.84□□□□□ -0.99
CCDC9-203ENST00000596938 APOC1P02654 83 aa8.84□□□□□ -0.99
CCDC9-203ENST00000596938 HLA-DPB1P04440 258 aa8.84□□□□□ -0.99
CCDC9-203ENST00000596938 WNT2P09544 360 aa8.84□□□□□ -0.99
CCDC9-203ENST00000596938 PRKACGP22612 351 aa8.84□□□□□ -0.99
CCDC9-203ENST00000596938 POU1F1P28069 291 aa8.84□□□□□ -0.99
CCDC9-203ENST00000596938 DDOSTP39656 456 aa8.84□□□□□ -0.99
CCDC9-203ENST00000596938 PMELP40967 661 aa8.84□□□□□ -0.99
CCDC9-203ENST00000596938 CD200P41217 278 aa8.84□□□□□ -0.99
CCDC9-203ENST00000596938 RASSF2P50749 326 aa8.84□□□□□ -0.99
CCDC9-203ENST00000596938 MMP16P51512 607 aa8.84□□□□□ -0.99
CCDC9-203ENST00000596938 PRKXP51817 358 aa8.84□□□□□ -0.99
CCDC9-203ENST00000596938 GRB2P62993 217 aaKnown RBP8.84□□□□□ -0.99
CCDC9-203ENST00000596938 LCN2P80188 198 aa8.84□□□□□ -0.99
CCDC9-203ENST00000596938 HNRNPA0Q13151 305 aaKnown RBP8.84□□□□□ -0.99
CCDC9-203ENST00000596938 MAB21L1Q13394 359 aa8.84□□□□□ -0.99
CCDC9-203ENST00000596938 SNAI3Q3KNW1 292 aa8.84□□□□□ -0.99
CCDC9-203ENST00000596938 SHQ1Q6PI26 577 aaKnown RBP8.84□□□□□ -0.99
CCDC9-203ENST00000596938 SHFQ7M4L6 423 aa8.84□□□□□ -0.99
CCDC9-203ENST00000596938 KLBQ86Z14 1044 aa8.84□□□□□ -0.99
CCDC9-203ENST00000596938 C1orf87Q8N0U7 546 aa8.84□□□□□ -0.99
CCDC9-203ENST00000596938 IQCF1Q8N6M8 205 aa8.84□□□□□ -0.99
CCDC9-203ENST00000596938 ZNF420Q8TAQ5 688 aaPredicted RBP8.84□□□□□ -0.99
CCDC9-203ENST00000596938 Q8TCH9 128 aa8.84□□□□□ -0.99
CCDC9-203ENST00000596938 RNF133Q8WVZ7 376 aa8.84□□□□□ -0.99
CCDC9-203ENST00000596938 DNAJC9Q8WXX5 260 aa8.84□□□□□ -0.99
CCDC9-203ENST00000596938 SPSB4Q96A44 273 aa8.84□□□□□ -0.99
CCDC9-203ENST00000596938 INTS14Q96SY0 518 aa8.84□□□□□ -0.99
CCDC9-203ENST00000596938 CADM1Q9BY67 442 aaKnown RBP8.84□□□□□ -0.99
CCDC9-203ENST00000596938 TOR3AQ9H497 397 aa8.84□□□□□ -0.99
CCDC9-203ENST00000596938 SP140LQ9H930 580 aa8.84□□□□□ -0.99
CCDC9-203ENST00000596938 MED20Q9H944 212 aa8.84□□□□□ -0.99
CCDC9-203ENST00000596938 NTN4Q9HB63 628 aa8.84□□□□□ -0.99
CCDC9-203ENST00000596938 TMEM165Q9HC07 324 aa8.84□□□□□ -0.99
CCDC9-203ENST00000596938 OPN4Q9UHM6 478 aa8.84□□□□□ -0.99
CCDC9-203ENST00000596938 C5orf63A6NC05 138 aa8.83□□□□□ -1
CCDC9-203ENST00000596938 FAM183AA6NL82 134 aa8.83□□□□□ -1
CCDC9-203ENST00000596938 PRR23D1E9PI22 279 aaPredicted RBP8.83□□□□□ -1
CCDC9-203ENST00000596938 ATP5HO75947 161 aa8.83□□□□□ -1
CCDC9-203ENST00000596938 PTBP3O95758 552 aaKnown RBP8.83□□□□□ -1
CCDC9-203ENST00000596938 PRR23D2P0DMB1 279 aaPredicted RBP8.83□□□□□ -1
CCDC9-203ENST00000596938 CA6P23280 308 aa8.83□□□□□ -1
CCDC9-203ENST00000596938 RBMXP38159 391 aaKnown RBP8.83□□□□□ -1
CCDC9-203ENST00000596938 EIF2B1Q14232 305 aaKnown RBP8.83□□□□□ -1
CCDC9-203ENST00000596938 OR8G1Q15617 311 aa8.83□□□□□ -1
CCDC9-203ENST00000596938 GLYATL3Q5SZD4 288 aa8.83□□□□□ -1
CCDC9-203ENST00000596938 USP43Q70EL4 1123 aa8.83□□□□□ -1
CCDC9-203ENST00000596938 DPY19L4Q7Z388 723 aa8.83□□□□□ -1
CCDC9-203ENST00000596938 C1QL2Q7Z5L3 287 aa8.83□□□□□ -1
CCDC9-203ENST00000596938 MOGAT3Q86VF5 341 aa8.83□□□□□ -1
CCDC9-203ENST00000596938 TIGD4Q8IY51 512 aa8.83□□□□□ -1
CCDC9-203ENST00000596938 HS3ST5Q8IZT8 346 aa8.83□□□□□ -1
CCDC9-203ENST00000596938 ZNF454Q8N9F8 522 aa8.83□□□□□ -1
CCDC9-203ENST00000596938 SPERTQ8NA61 448 aa8.83□□□□□ -1
CCDC9-203ENST00000596938 NANPQ8TBE9 248 aa8.83□□□□□ -1
CCDC9-203ENST00000596938 UTP4Q969X6 686 aaKnown RBP8.83□□□□□ -1
CCDC9-203ENST00000596938 OTULINQ96BN8 352 aa8.83□□□□□ -1
CCDC9-203ENST00000596938 ABHD6Q9BV23 337 aa8.83□□□□□ -1
CCDC9-203ENST00000596938 C19orf24Q9BVV8 132 aa8.83□□□□□ -1
CCDC9-203ENST00000596938 TEX12Q9BXU0 123 aa8.83□□□□□ -1
CCDC9-203ENST00000596938 OR51V1Q9H2C8 321 aa8.83□□□□□ -1
CCDC9-203ENST00000596938 MMADHCQ9H3L0 296 aaPredicted RBP8.83□□□□□ -1
CCDC9-203ENST00000596938 OCEL1Q9H607 264 aa8.83□□□□□ -1
CCDC9-203ENST00000596938 C7orf69Q9H7B7 122 aa8.83□□□□□ -1
CCDC9-203ENST00000596938 MRPL15Q9P015 296 aaKnown RBP8.83□□□□□ -1
CCDC9-203ENST00000596938 LOC105371242A0A075B767 164 aa8.82□□□□□ -1
CCDC9-203ENST00000596938 GGT3PA6NGU5 568 aa8.82□□□□□ -1
CCDC9-203ENST00000596938 CEACAM18A8MTB9 384 aa8.82□□□□□ -1
CCDC9-203ENST00000596938 A8MXK9 166 aa8.82□□□□□ -1
CCDC9-203ENST00000596938 TRAPPC2LH3BP13 241 aa8.82□□□□□ -1
CCDC9-203ENST00000596938 PRODHO43272 600 aa8.82□□□□□ -1
CCDC9-203ENST00000596938 XRCC2O43543 280 aa8.82□□□□□ -1
CCDC9-203ENST00000596938 CYB5R3P00387 301 aaPredicted RBP8.82□□□□□ -1
CCDC9-203ENST00000596938 IRF2P14316 349 aa8.82□□□□□ -1
CCDC9-203ENST00000596938 ANOS1P23352 680 aa8.82□□□□□ -1
CCDC9-203ENST00000596938 CFL1P23528 166 aaKnown RBP8.82□□□□□ -1
CCDC9-203ENST00000596938 OPRL1P41146 370 aa8.82□□□□□ -1
CCDC9-203ENST00000596938 RAD23AP54725 363 aa8.82□□□□□ -1
CCDC9-203ENST00000596938 PRSS12P56730 875 aa8.82□□□□□ -1
CCDC9-203ENST00000596938 ESCO2Q56NI9 601 aa8.82□□□□□ -1
CCDC9-203ENST00000596938 SLC35D3Q5M8T2 416 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms