RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 OR2V2Q96R30 315 aa17.83■□□□□ 0.44
PNKP-209ENST00000596726 GABARAPL3Q9BY60 117 aa17.83■□□□□ 0.44
PNKP-209ENST00000596726 NARFLQ9H6Q4 476 aa17.83■□□□□ 0.44
PNKP-209ENST00000596726 H0YL77 283 aa17.82■□□□□ 0.44
PNKP-209ENST00000596726 TGFAP01135 160 aa17.82■□□□□ 0.44
PNKP-209ENST00000596726 LYNP07948 512 aa17.82■□□□□ 0.44
PNKP-209ENST00000596726 POLR2IP36954 125 aaKnown RBP17.82■□□□□ 0.44
PNKP-209ENST00000596726 NAA10P41227 235 aaPredicted RBP17.82■□□□□ 0.44
PNKP-209ENST00000596726 CX3CR1P49238 355 aa17.82■□□□□ 0.44
PNKP-209ENST00000596726 RPS7P62081 194 aaKnown RBP17.82■□□□□ 0.44
PNKP-209ENST00000596726 MVKQ03426 396 aa17.82■□□□□ 0.44
PNKP-209ENST00000596726 AADACL4Q5VUY2 407 aa17.82■□□□□ 0.44
PNKP-209ENST00000596726 MRPL21Q7Z2W9 205 aaKnown RBP17.82■□□□□ 0.44
PNKP-209ENST00000596726 BHLHE23Q8NDY6 225 aa17.82■□□□□ 0.44
PNKP-209ENST00000596726 OR10AD1Q8NGE0 317 aa17.82■□□□□ 0.44
PNKP-209ENST00000596726 OR2AE1Q8NHA4 323 aa17.82■□□□□ 0.44
PNKP-209ENST00000596726 RAB1CQ92928 201 aa17.82■□□□□ 0.44
PNKP-209ENST00000596726 SPSB4Q96A44 273 aa17.82■□□□□ 0.44
PNKP-209ENST00000596726 TMEM100Q9NV29 134 aa17.82■□□□□ 0.44
PNKP-209ENST00000596726 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.82■□□□□ 0.44
PNKP-209ENST00000596726 KCNS2Q9ULS6 477 aa17.82■□□□□ 0.44
PNKP-209ENST00000596726 KLHDC2Q9Y2U9 406 aa17.82■□□□□ 0.44
PNKP-209ENST00000596726 JMJD1CQ15652 2540 aa17.82■□□□□ 0.44
PNKP-209ENST00000596726 CD300LBA8K4G0 201 aa17.81■□□□□ 0.44
PNKP-209ENST00000596726 M0R129 80 aa17.81■□□□□ 0.44
PNKP-209ENST00000596726 APOC1P02654 83 aa17.81■□□□□ 0.44
PNKP-209ENST00000596726 ALOX5APP20292 161 aa17.81■□□□□ 0.44
PNKP-209ENST00000596726 HSD11B1P28845 292 aa17.81■□□□□ 0.44
PNKP-209ENST00000596726 HNRNPA0Q13151 305 aaKnown RBP17.81■□□□□ 0.44
PNKP-209ENST00000596726 SLC16A9Q7RTY1 509 aa17.81■□□□□ 0.44
PNKP-209ENST00000596726 C10orf67Q8IYJ2 551 aa17.81■□□□□ 0.44
PNKP-209ENST00000596726 TCEANCQ8N8B7 351 aa17.81■□□□□ 0.44
PNKP-209ENST00000596726 TMEM163Q8TC26 289 aa17.81■□□□□ 0.44
PNKP-209ENST00000596726 THEM6Q8WUY1 208 aa17.81■□□□□ 0.44
PNKP-209ENST00000596726 TIMD4Q96H15 378 aa17.81■□□□□ 0.44
PNKP-209ENST00000596726 MEGF10Q96KG7 1140 aa17.81■□□□□ 0.44
PNKP-209ENST00000596726 RBM4BQ9BQ04 359 aaKnown RBP17.81■□□□□ 0.44
PNKP-209ENST00000596726 YIPF3Q9GZM5 350 aa17.81■□□□□ 0.44
PNKP-209ENST00000596726 OPA3Q9H6K4 179 aa17.81■□□□□ 0.44
PNKP-209ENST00000596726 TMEM106BQ9NUM4 274 aa17.81■□□□□ 0.44
PNKP-209ENST00000596726 DCAF16Q9NXF7 216 aa17.81■□□□□ 0.44
PNKP-209ENST00000596726 FAM157AC9JC47 383 aa17.8■□□□□ 0.44
PNKP-209ENST00000596726 XRCC2O43543 280 aa17.8■□□□□ 0.44
PNKP-209ENST00000596726 H2BFMP0C1H6 154 aa17.8■□□□□ 0.44
PNKP-209ENST00000596726 HCCSP53701 268 aa17.8■□□□□ 0.44
PNKP-209ENST00000596726 ZNF121P58317 390 aaPredicted RBP17.8■□□□□ 0.44
PNKP-209ENST00000596726 LCN1P1Q5VSP4 162 aa17.8■□□□□ 0.44
PNKP-209ENST00000596726 NXNL2Q5VZ03 156 aa17.8■□□□□ 0.44
PNKP-209ENST00000596726 MEPCEQ7L2J0 689 aaKnown RBP17.8■□□□□ 0.44
PNKP-209ENST00000596726 BCDIN3DQ7Z5W3 292 aaKnown RBP17.8■□□□□ 0.44
PNKP-209ENST00000596726 RAB3IPQ96QF0 476 aaPredicted RBP17.8■□□□□ 0.44
PNKP-209ENST00000596726 SIGLEC11Q96RL6 698 aa17.8■□□□□ 0.44
PNKP-209ENST00000596726 SP140LQ9H930 580 aa17.8■□□□□ 0.44
PNKP-209ENST00000596726 GCM1Q9NP62 436 aa17.8■□□□□ 0.44
PNKP-209ENST00000596726 PPP1R3CQ9UQK1 317 aa17.8■□□□□ 0.44
PNKP-209ENST00000596726 B4DSR2 109 aa17.79■□□□□ 0.44
PNKP-209ENST00000596726 HLA-DPB1P04440 258 aa17.79■□□□□ 0.44
PNKP-209ENST00000596726 ANXA2P07355 339 aaKnown RBP17.79■□□□□ 0.44
PNKP-209ENST00000596726 RBMXP38159 391 aaKnown RBP17.79■□□□□ 0.44
PNKP-209ENST00000596726 SRP9P49458 86 aaKnown RBP17.79■□□□□ 0.44
PNKP-209ENST00000596726 PRIMA1Q86XR5 153 aa17.79■□□□□ 0.44
PNKP-209ENST00000596726 SPRYD4Q8WW59 207 aaPredicted RBP17.79■□□□□ 0.44
PNKP-209ENST00000596726 SGK3Q96BR1 496 aa17.79■□□□□ 0.44
PNKP-209ENST00000596726 USE1Q9NZ43 259 aa17.79■□□□□ 0.44
PNKP-209ENST00000596726 ZNF319Q9P2F9 582 aa17.79■□□□□ 0.44
PNKP-209ENST00000596726 CDC42EP3Q9UKI2 254 aa17.79■□□□□ 0.44
PNKP-209ENST00000596726 N6AMT1Q9Y5N5 214 aa17.79■□□□□ 0.44
PNKP-209ENST00000596726 NPTNQ9Y639 398 aa17.79■□□□□ 0.44
PNKP-209ENST00000596726 GGT3PA6NGU5 568 aa17.78■□□□□ 0.44
PNKP-209ENST00000596726 F5H5P2 479 aa17.78■□□□□ 0.44
PNKP-209ENST00000596726 IGHV2-70P01814 119 aa17.78■□□□□ 0.44
PNKP-209ENST00000596726 ALPLP05186 524 aa17.78■□□□□ 0.44
PNKP-209ENST00000596726 DVL1P1P54792 670 aaPredicted RBP17.78■□□□□ 0.44
PNKP-209ENST00000596726 CHRFAM7AQ494W8 412 aa17.78■□□□□ 0.44
PNKP-209ENST00000596726 PEG10Q86TG7 708 aaKnown RBP17.78■□□□□ 0.44
PNKP-209ENST00000596726 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.78■□□□□ 0.44
PNKP-209ENST00000596726 CELF2-AS1Q8N7Q2 184 aa17.78■□□□□ 0.44
PNKP-209ENST00000596726 OR52H1Q8NGJ2 320 aa17.78■□□□□ 0.44
PNKP-209ENST00000596726 IL4I1Q96RQ9 567 aa17.78■□□□□ 0.44
PNKP-209ENST00000596726 SLC22A4Q9H015 551 aa17.78■□□□□ 0.44
PNKP-209ENST00000596726 RIBC2Q9H4K1 309 aa17.78■□□□□ 0.44
PNKP-209ENST00000596726 ZNF665Q9H7R5 613 aa17.78■□□□□ 0.44
PNKP-209ENST00000596726 S100A14Q9HCY8 104 aa17.78■□□□□ 0.44
PNKP-209ENST00000596726 DNAJC27Q9NZQ0 273 aa17.78■□□□□ 0.44
PNKP-209ENST00000596726 LAMP5Q9UJQ1 280 aa17.78■□□□□ 0.44
PNKP-209ENST00000596726 SLC22A31A6NKX4 558 aa17.77■□□□□ 0.44
PNKP-209ENST00000596726 IFNL4K9M1U5 179 aa17.77■□□□□ 0.44
PNKP-209ENST00000596726 TBX1O43435 398 aa17.77■□□□□ 0.44
PNKP-209ENST00000596726 IGHV2-5P01817 119 aa17.77■□□□□ 0.44
PNKP-209ENST00000596726 MRPL3P09001 348 aaKnown RBP17.77■□□□□ 0.44
PNKP-209ENST00000596726 CD200P41217 278 aa17.77■□□□□ 0.44
PNKP-209ENST00000596726 GATA4P43694 442 aa17.77■□□□□ 0.44
PNKP-209ENST00000596726 MMP16P51512 607 aa17.77■□□□□ 0.44
PNKP-209ENST00000596726 FAM3AP98173 230 aa17.77■□□□□ 0.44
PNKP-209ENST00000596726 MAB21L1Q13394 359 aa17.77■□□□□ 0.44
PNKP-209ENST00000596726 DEGS2Q6QHC5 323 aa17.77■□□□□ 0.44
PNKP-209ENST00000596726 LRRN1Q6UXK5 716 aa17.77■□□□□ 0.44
PNKP-209ENST00000596726 FAM57BQ71RH2 274 aa17.77■□□□□ 0.44
PNKP-209ENST00000596726 NIPAL2Q9H841 368 aa17.77■□□□□ 0.44
PNKP-209ENST00000596726 HAO2Q9NYQ3 351 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms