RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 OR4M2Q8NGB6 313 aa14.98□□□□□ -0.01
SHKBP1-204ENST00000594862 OR10AD1Q8NGE0 317 aa14.98□□□□□ -0.01
SHKBP1-204ENST00000594862 OR6N2Q8NGY6 317 aa14.98□□□□□ -0.01
SHKBP1-204ENST00000594862 SLCO4A1Q96BD0 722 aa14.98□□□□□ -0.01
SHKBP1-204ENST00000594862 MEGF10Q96KG7 1140 aa14.98□□□□□ -0.01
SHKBP1-204ENST00000594862 GCM1Q9NP62 436 aa14.98□□□□□ -0.01
SHKBP1-204ENST00000594862 CENPMQ9NSP4 180 aa14.98□□□□□ -0.01
SHKBP1-204ENST00000594862 PCDHB10Q9UN67 800 aa14.98□□□□□ -0.01
SHKBP1-204ENST00000594862 FAM183AA6NL82 134 aa14.97□□□□□ -0.01
SHKBP1-204ENST00000594862 FOXH1O75593 365 aa14.97□□□□□ -0.01
SHKBP1-204ENST00000594862 FSTL3O95633 263 aa14.97□□□□□ -0.01
SHKBP1-204ENST00000594862 CFL1P23528 166 aaKnown RBP14.97□□□□□ -0.01
SHKBP1-204ENST00000594862 MDH2P40926 338 aaKnown RBP14.97□□□□□ -0.01
SHKBP1-204ENST00000594862 GATA4P43694 442 aa14.97□□□□□ -0.01
SHKBP1-204ENST00000594862 CDK5Q00535 292 aa14.97□□□□□ -0.01
SHKBP1-204ENST00000594862 MZT1Q08AG7 82 aa14.97□□□□□ -0.01
SHKBP1-204ENST00000594862 ATP6AP1Q15904 470 aa14.97□□□□□ -0.01
SHKBP1-204ENST00000594862 SNCBQ16143 134 aa14.97□□□□□ -0.01
SHKBP1-204ENST00000594862 PLBD1Q6P4A8 553 aa14.97□□□□□ -0.01
SHKBP1-204ENST00000594862 FAHD1Q6P587 224 aa14.97□□□□□ -0.01
SHKBP1-204ENST00000594862 IL17RELQ6ZVW7 336 aa14.97□□□□□ -0.01
SHKBP1-204ENST00000594862 KLBQ86Z14 1044 aa14.97□□□□□ -0.01
SHKBP1-204ENST00000594862 OR5K1Q8NHB7 308 aa14.97□□□□□ -0.01
SHKBP1-204ENST00000594862 RNF133Q8WVZ7 376 aa14.97□□□□□ -0.01
SHKBP1-204ENST00000594862 UTP4Q969X6 686 aaKnown RBP14.97□□□□□ -0.01
SHKBP1-204ENST00000594862 LPAR2Q9HBW0 351 aa14.97□□□□□ -0.01
SHKBP1-204ENST00000594862 UBAP1Q9NZ09 502 aa14.97□□□□□ -0.01
SHKBP1-204ENST00000594862 DYSFO75923 2080 aa14.97□□□□□ -0.01
SHKBP1-204ENST00000594862 PPIAL4EA0A075B759 164 aa14.96□□□□□ -0.01
SHKBP1-204ENST00000594862 PPIAL4CA0A0B4J2A2 164 aa14.96□□□□□ -0.01
SHKBP1-204ENST00000594862 GGT3PA6NGU5 568 aa14.96□□□□□ -0.01
SHKBP1-204ENST00000594862 CD300LBA8K4G0 201 aa14.96□□□□□ -0.01
SHKBP1-204ENST00000594862 PPIAL4DF5H284 164 aa14.96□□□□□ -0.01
SHKBP1-204ENST00000594862 TMEM178BH3BS89 294 aa14.96□□□□□ -0.01
SHKBP1-204ENST00000594862 PHF1O43189 567 aaPredicted RBP14.96□□□□□ -0.01
SHKBP1-204ENST00000594862 MLNRO43193 412 aa14.96□□□□□ -0.01
SHKBP1-204ENST00000594862 GMDSO60547 372 aa14.96□□□□□ -0.01
SHKBP1-204ENST00000594862 TIPRLO75663 272 aa14.96□□□□□ -0.01
SHKBP1-204ENST00000594862 CIB2O75838 187 aa14.96□□□□□ -0.01
SHKBP1-204ENST00000594862 SBK2P0C263 348 aa14.96□□□□□ -0.01
SHKBP1-204ENST00000594862 PPIAL4FP0DN26 164 aa14.96□□□□□ -0.01
SHKBP1-204ENST00000594862 IRF2P14316 349 aa14.96□□□□□ -0.01
SHKBP1-204ENST00000594862 FASP25445 335 aa14.96□□□□□ -0.01
SHKBP1-204ENST00000594862 DDOSTP39656 456 aa14.96□□□□□ -0.01
SHKBP1-204ENST00000594862 PRKXP51817 358 aa14.96□□□□□ -0.01
SHKBP1-204ENST00000594862 ESRRGP62508 458 aa14.96□□□□□ -0.01
SHKBP1-204ENST00000594862 DPY19L4Q7Z388 723 aa14.96□□□□□ -0.01
SHKBP1-204ENST00000594862 HS3ST5Q8IZT8 346 aa14.96□□□□□ -0.01
SHKBP1-204ENST00000594862 RFLNBQ8N5W9 214 aa14.96□□□□□ -0.01
SHKBP1-204ENST00000594862 SPERTQ8NA61 448 aa14.96□□□□□ -0.01
SHKBP1-204ENST00000594862 OR52H1Q8NGJ2 320 aa14.96□□□□□ -0.01
SHKBP1-204ENST00000594862 OR11L1Q8NGX0 322 aa14.96□□□□□ -0.01
SHKBP1-204ENST00000594862 ABHD6Q9BV23 337 aa14.96□□□□□ -0.01
SHKBP1-204ENST00000594862 REPIN1Q9BWE0 567 aaKnown RBP14.96□□□□□ -0.01
SHKBP1-204ENST00000594862 OR51V1Q9H2C8 321 aa14.96□□□□□ -0.01
SHKBP1-204ENST00000594862 MED20Q9H944 212 aa14.96□□□□□ -0.01
SHKBP1-204ENST00000594862 NTN4Q9HB63 628 aa14.96□□□□□ -0.01
SHKBP1-204ENST00000594862 MRPL15Q9P015 296 aaKnown RBP14.96□□□□□ -0.01
SHKBP1-204ENST00000594862 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.95□□□□□ -0.02
SHKBP1-204ENST00000594862 RNF212BA8MTL3 300 aa14.95□□□□□ -0.02
SHKBP1-204ENST00000594862 PLPP2O43688 288 aa14.95□□□□□ -0.02
SHKBP1-204ENST00000594862 PSKH1P11801 424 aa14.95□□□□□ -0.02
SHKBP1-204ENST00000594862 PRKACGP22612 351 aa14.95□□□□□ -0.02
SHKBP1-204ENST00000594862 CD200P41217 278 aa14.95□□□□□ -0.02
SHKBP1-204ENST00000594862 CX3CR1P49238 355 aa14.95□□□□□ -0.02
SHKBP1-204ENST00000594862 CRISP1P54107 249 aa14.95□□□□□ -0.02
SHKBP1-204ENST00000594862 OR8G1Q15617 311 aa14.95□□□□□ -0.02
SHKBP1-204ENST00000594862 SNAI3Q3KNW1 292 aa14.95□□□□□ -0.02
SHKBP1-204ENST00000594862 SPRNQ5BIV9 151 aa14.95□□□□□ -0.02
SHKBP1-204ENST00000594862 GLYATL3Q5SZD4 288 aa14.95□□□□□ -0.02
SHKBP1-204ENST00000594862 LCN1P1Q5VSP4 162 aa14.95□□□□□ -0.02
SHKBP1-204ENST00000594862 DCAF12L2Q5VW00 463 aa14.95□□□□□ -0.02
SHKBP1-204ENST00000594862 LIPNQ5VXI9 398 aa14.95□□□□□ -0.02
SHKBP1-204ENST00000594862 NAA40Q86UY6 237 aa14.95□□□□□ -0.02
SHKBP1-204ENST00000594862 LRRC28Q86X40 367 aaPredicted RBP14.95□□□□□ -0.02
SHKBP1-204ENST00000594862 TIGD4Q8IY51 512 aa14.95□□□□□ -0.02
SHKBP1-204ENST00000594862 PLPP7Q8NBV4 271 aa14.95□□□□□ -0.02
SHKBP1-204ENST00000594862 SPSB4Q96A44 273 aa14.95□□□□□ -0.02
SHKBP1-204ENST00000594862 DUS3LQ96G46 650 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-204ENST00000594862 SIGLEC11Q96RL6 698 aa14.95□□□□□ -0.02
SHKBP1-204ENST00000594862 ADAT1Q9BUB4 502 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-204ENST00000594862 RGCCQ9H4X1 137 aa14.95□□□□□ -0.02
SHKBP1-204ENST00000594862 NIPAL2Q9H841 368 aa14.95□□□□□ -0.02
SHKBP1-204ENST00000594862 PATZ1Q9HBE1 687 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-204ENST00000594862 G6PC2Q9NQR9 355 aa14.95□□□□□ -0.02
SHKBP1-204ENST00000594862 F5H5P2 479 aa14.94□□□□□ -0.02
SHKBP1-204ENST00000594862 G3V2T6 193 aa14.94□□□□□ -0.02
SHKBP1-204ENST00000594862 ANXA2P07355 339 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-204ENST00000594862 LYNP07948 512 aa14.94□□□□□ -0.02
SHKBP1-204ENST00000594862 H2BFMP0C1H6 154 aa14.94□□□□□ -0.02
SHKBP1-204ENST00000594862 RPS7P62081 194 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-204ENST00000594862 ZNF92Q03936 586 aa14.94□□□□□ -0.02
SHKBP1-204ENST00000594862 ZMYND11Q15326 602 aa14.94□□□□□ -0.02
SHKBP1-204ENST00000594862 SNAPC1Q16533 368 aa14.94□□□□□ -0.02
SHKBP1-204ENST00000594862 TIGD6Q17RP2 521 aa14.94□□□□□ -0.02
SHKBP1-204ENST00000594862 KLHL12Q53G59 568 aa14.94□□□□□ -0.02
SHKBP1-204ENST00000594862 FAHD2BQ6P2I3 314 aaPredicted RBP14.94□□□□□ -0.02
SHKBP1-204ENST00000594862 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.94□□□□□ -0.02
SHKBP1-204ENST00000594862 ZDHHC13Q8IUH4 622 aa14.94□□□□□ -0.02
SHKBP1-204ENST00000594862 CPOQ8IVL8 374 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms