RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 GABRB1P18505 474 aa21.94■■□□□ 1.1
TRIM28-204ENST00000594806 TNFSF4P23510 183 aa21.94■■□□□ 1.1
TRIM28-204ENST00000594806 MAGEB1P43366 347 aa21.94■■□□□ 1.1
TRIM28-204ENST00000594806 MTNR1AP48039 350 aa21.94■■□□□ 1.1
TRIM28-204ENST00000594806 PSMA6P60900 246 aaKnown RBP21.94■■□□□ 1.1
TRIM28-204ENST00000594806 OR2T2Q6IF00 324 aa21.94■■□□□ 1.1
TRIM28-204ENST00000594806 USP51Q70EK9 711 aa21.94■■□□□ 1.1
TRIM28-204ENST00000594806 ENTHD1Q8IYW4 607 aa21.94■■□□□ 1.1
TRIM28-204ENST00000594806 OR13G1Q8NGZ3 307 aa21.94■■□□□ 1.1
TRIM28-204ENST00000594806 COX4I2Q96KJ9 171 aa21.94■■□□□ 1.1
TRIM28-204ENST00000594806 PIMREGQ9BSJ6 248 aa21.94■■□□□ 1.1
TRIM28-204ENST00000594806 REG4Q9BYZ8 158 aa21.94■■□□□ 1.1
TRIM28-204ENST00000594806 RNPEPL1Q9HAU8 725 aa21.94■■□□□ 1.1
TRIM28-204ENST00000594806 COPS3Q9UNS2 423 aa21.94■■□□□ 1.1
TRIM28-204ENST00000594806 LRP12Q9Y561 859 aa21.94■■□□□ 1.1
TRIM28-204ENST00000594806 PCDHGB1Q9Y5G3 927 aa21.94■■□□□ 1.1
TRIM28-204ENST00000594806 FLNAP21333 2647 aaKnown RBP21.93■■□□□ 1.1
TRIM28-204ENST00000594806 SPRY3O43610 288 aa21.93■■□□□ 1.1
TRIM28-204ENST00000594806 HPXP02790 462 aa21.93■■□□□ 1.1
TRIM28-204ENST00000594806 SLC2A1P11166 492 aa21.93■■□□□ 1.1
TRIM28-204ENST00000594806 ACHEP22303 614 aa21.93■■□□□ 1.1
TRIM28-204ENST00000594806 GIFP27352 417 aa21.93■■□□□ 1.1
TRIM28-204ENST00000594806 CXCR4P61073 352 aa21.93■■□□□ 1.1
TRIM28-204ENST00000594806 CCL8P80075 99 aa21.93■■□□□ 1.1
TRIM28-204ENST00000594806 GLYATL3Q5SZD4 288 aa21.93■■□□□ 1.1
TRIM28-204ENST00000594806 ZNF322Q6U7Q0 402 aaPredicted RBP21.93■■□□□ 1.1
TRIM28-204ENST00000594806 DHRSXQ8N5I4 330 aa21.93■■□□□ 1.1
TRIM28-204ENST00000594806 ITFG2Q969R8 447 aa21.93■■□□□ 1.1
TRIM28-204ENST00000594806 SLC22A4Q9H015 551 aa21.93■■□□□ 1.1
TRIM28-204ENST00000594806 SAP30LQ9HAJ7 183 aa21.93■■□□□ 1.1
TRIM28-204ENST00000594806 MSL2Q9HCI7 577 aa21.93■■□□□ 1.1
TRIM28-204ENST00000594806 ZNF391Q9UJN7 358 aa21.93■■□□□ 1.1
TRIM28-204ENST00000594806 NOP16Q9Y3C1 178 aaKnown RBP21.93■■□□□ 1.1
TRIM28-204ENST00000594806 IGHV4-30-2A0A087WSY4 118 aa21.92■■□□□ 1.1
TRIM28-204ENST00000594806 TBX1O43435 398 aa21.92■■□□□ 1.1
TRIM28-204ENST00000594806 DDOSTP39656 456 aa21.92■■□□□ 1.1
TRIM28-204ENST00000594806 RIDAP52758 137 aaKnown RBP21.92■■□□□ 1.1
TRIM28-204ENST00000594806 ZNF92Q03936 586 aa21.92■■□□□ 1.1
TRIM28-204ENST00000594806 FAM57BQ71RH2 274 aa21.92■■□□□ 1.1
TRIM28-204ENST00000594806 GTF3AQ92664 365 aaKnown RBP21.92■■□□□ 1.1
TRIM28-204ENST00000594806 PGAM5Q96HS1 289 aa21.92■■□□□ 1.1
TRIM28-204ENST00000594806 SLC30A2Q9BRI3 323 aa21.92■■□□□ 1.1
TRIM28-204ENST00000594806 CHODLQ9H9P2 273 aa21.92■■□□□ 1.1
TRIM28-204ENST00000594806 IKZF2Q9UKS7 526 aa21.92■■□□□ 1.1
TRIM28-204ENST00000594806 N6AMT1Q9Y5N5 214 aa21.92■■□□□ 1.1
TRIM28-204ENST00000594806 ACANP16112 2415 aa21.91■■□□□ 1.1
TRIM28-204ENST00000594806 VWC2LB2RUY7 222 aa21.91■■□□□ 1.1
TRIM28-204ENST00000594806 TPD52L2O43399 206 aaKnown RBP21.91■■□□□ 1.1
TRIM28-204ENST00000594806 NCR1O76036 304 aa21.91■■□□□ 1.1
TRIM28-204ENST00000594806 INHBBP09529 407 aa21.91■■□□□ 1.1
TRIM28-204ENST00000594806 CRYBB2P43320 205 aa21.91■■□□□ 1.1
TRIM28-204ENST00000594806 IL18R1Q13478 541 aa21.91■■□□□ 1.1
TRIM28-204ENST00000594806 CARTPTQ16568 116 aa21.91■■□□□ 1.1
TRIM28-204ENST00000594806 TSTQ16762 297 aaKnown RBP21.91■■□□□ 1.1
TRIM28-204ENST00000594806 TIGD6Q17RP2 521 aa21.91■■□□□ 1.1
TRIM28-204ENST00000594806 ZNF829Q3KNS6 432 aaPredicted RBP21.91■■□□□ 1.1
TRIM28-204ENST00000594806 Q6ZR03 302 aa21.91■■□□□ 1.1
TRIM28-204ENST00000594806 OR5AS1Q8N127 324 aa21.91■■□□□ 1.1
TRIM28-204ENST00000594806 SETD9Q8NE22 299 aa21.91■■□□□ 1.1
TRIM28-204ENST00000594806 SPRYD4Q8WW59 207 aaPredicted RBP21.91■■□□□ 1.1
TRIM28-204ENST00000594806 ELMOD3Q96FG2 381 aa21.91■■□□□ 1.1
TRIM28-204ENST00000594806 MYCBPQ99417 103 aaPredicted RBP21.91■■□□□ 1.1
TRIM28-204ENST00000594806 TMEM100Q9NV29 134 aa21.91■■□□□ 1.1
TRIM28-204ENST00000594806 IL19Q9UHD0 177 aa21.91■■□□□ 1.1
TRIM28-204ENST00000594806 CELSR1Q9NYQ6 3014 aa21.9■■□□□ 1.1
TRIM28-204ENST00000594806 A0A1B0GWJ7 208 aa21.9■■□□□ 1.1
TRIM28-204ENST00000594806 GGT3PA6NGU5 568 aa21.9■■□□□ 1.1
TRIM28-204ENST00000594806 CD300LBA8K4G0 201 aa21.9■■□□□ 1.1
TRIM28-204ENST00000594806 RNF223E7ERA6 249 aa21.9■■□□□ 1.1
TRIM28-204ENST00000594806 H0YAE9 185 aa21.9■■□□□ 1.1
TRIM28-204ENST00000594806 TNFRSF1AP19438 455 aa21.9■■□□□ 1.1
TRIM28-204ENST00000594806 MMP16P51512 607 aa21.9■■□□□ 1.1
TRIM28-204ENST00000594806 TMEM33P57088 247 aa21.9■■□□□ 1.1
TRIM28-204ENST00000594806 ACTC1P68032 377 aa21.9■■□□□ 1.1
TRIM28-204ENST00000594806 ACTA1P68133 377 aa21.9■■□□□ 1.1
TRIM28-204ENST00000594806 TNFAIP6P98066 277 aaPredicted RBP21.9■■□□□ 1.1
TRIM28-204ENST00000594806 SNCBQ16143 134 aa21.9■■□□□ 1.1
TRIM28-204ENST00000594806 ZNF691Q5VV52 312 aa21.9■■□□□ 1.1
TRIM28-204ENST00000594806 OR2Z1Q8NG97 314 aa21.9■■□□□ 1.1
TRIM28-204ENST00000594806 OR2AE1Q8NHA4 323 aa21.9■■□□□ 1.1
TRIM28-204ENST00000594806 SGK3Q96BR1 496 aa21.9■■□□□ 1.1
TRIM28-204ENST00000594806 RNFT2Q96EX2 444 aa21.9■■□□□ 1.1
TRIM28-204ENST00000594806 NKX1-2Q9UD57 310 aaPredicted RBP21.9■■□□□ 1.1
TRIM28-204ENST00000594806 TMEM269A0A1B0GVZ9 245 aa21.89■■□□□ 1.09
TRIM28-204ENST00000594806 SULT1C4O75897 302 aa21.89■■□□□ 1.09
TRIM28-204ENST00000594806 NR4A2P43354 598 aa21.89■■□□□ 1.09
TRIM28-204ENST00000594806 ADARB1P78563 741 aaKnown RBP21.89■■□□□ 1.09
TRIM28-204ENST00000594806 LOXL1Q08397 574 aaPredicted RBP21.89■■□□□ 1.09
TRIM28-204ENST00000594806 RIN1Q13671 783 aa21.89■■□□□ 1.09
TRIM28-204ENST00000594806 BIVMQ86UB2 503 aa21.89■■□□□ 1.09
TRIM28-204ENST00000594806 LURAP1LQ8IV03 231 aa21.89■■□□□ 1.09
TRIM28-204ENST00000594806 OR10H4Q8NGA5 316 aa21.89■■□□□ 1.09
TRIM28-204ENST00000594806 CYGBQ8WWM9 190 aa21.89■■□□□ 1.09
TRIM28-204ENST00000594806 REEP6Q96HR9 211 aa21.89■■□□□ 1.09
TRIM28-204ENST00000594806 BRD7Q9NPI1 651 aa21.89■■□□□ 1.09
TRIM28-204ENST00000594806 FAM206AQ9NX38 181 aa21.89■■□□□ 1.09
TRIM28-204ENST00000594806 MRPL15Q9P015 296 aaKnown RBP21.89■■□□□ 1.09
TRIM28-204ENST00000594806 RPL36Q9Y3U8 105 aaKnown RBP21.89■■□□□ 1.09
TRIM28-204ENST00000594806 HSPE1-MOB4S4R3N1 261 aa21.89■■□□□ 1.09
TRIM28-204ENST00000594806 IGHV1-69-2A0A0G2JMI3 117 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms