RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 RRM2BQ7LG56 351 aa8.83□□□□□ -1
USE1-203ENST00000593597 WDR86Q86TI4 376 aa8.83□□□□□ -1
USE1-203ENST00000593597 CYP4Z1Q86W10 505 aa8.83□□□□□ -1
USE1-203ENST00000593597 RNF148Q8N7C7 305 aa8.83□□□□□ -1
USE1-203ENST00000593597 CELF2-AS1Q8N7Q2 184 aa8.83□□□□□ -1
USE1-203ENST00000593597 PLEKHA8Q96JA3 519 aa8.83□□□□□ -1
USE1-203ENST00000593597 ATF6BQ99941 703 aa8.83□□□□□ -1
USE1-203ENST00000593597 CITED1Q99966 193 aa8.83□□□□□ -1
USE1-203ENST00000593597 HOPXQ9BPY8 73 aaPredicted RBP8.83□□□□□ -1
USE1-203ENST00000593597 KCTD14Q9BQ13 255 aaPredicted RBP8.83□□□□□ -1
USE1-203ENST00000593597 PCGF1Q9BSM1 259 aa8.83□□□□□ -1
USE1-203ENST00000593597 SIRPDQ9H106 197 aa8.83□□□□□ -1
USE1-203ENST00000593597 RASSF4Q9H2L5 321 aa8.83□□□□□ -1
USE1-203ENST00000593597 LRRC30A6NM36 301 aa8.82□□□□□ -1
USE1-203ENST00000593597 CD300LBA8K4G0 201 aa8.82□□□□□ -1
USE1-203ENST00000593597 ZNF879B4DU55 563 aa8.82□□□□□ -1
USE1-203ENST00000593597 LCATP04180 440 aa8.82□□□□□ -1
USE1-203ENST00000593597 OTX1P32242 354 aaPredicted RBP8.82□□□□□ -1
USE1-203ENST00000593597 PYCR1P32322 319 aa8.82□□□□□ -1
USE1-203ENST00000593597 MIDNQ504T8 468 aa8.82□□□□□ -1
USE1-203ENST00000593597 GLYATL3Q5SZD4 288 aa8.82□□□□□ -1
USE1-203ENST00000593597 ZNF362Q5T0B9 420 aaPredicted RBP8.82□□□□□ -1
USE1-203ENST00000593597 GLYATQ6IB77 296 aa8.82□□□□□ -1
USE1-203ENST00000593597 PGM2L1Q6PCE3 622 aa8.82□□□□□ -1
USE1-203ENST00000593597 DNM1P34Q6PK57 102 aa8.82□□□□□ -1
USE1-203ENST00000593597 ZNF620Q6ZNG0 422 aa8.82□□□□□ -1
USE1-203ENST00000593597 NLRC3Q7RTR2 1065 aa8.82□□□□□ -1
USE1-203ENST00000593597 FAM90A1Q86YD7 464 aa8.82□□□□□ -1
USE1-203ENST00000593597 C1orf87Q8N0U7 546 aa8.82□□□□□ -1
USE1-203ENST00000593597 GCSAMQ8N6F7 178 aa8.82□□□□□ -1
USE1-203ENST00000593597 OR8D4Q8NGM9 314 aa8.82□□□□□ -1
USE1-203ENST00000593597 TECTBQ96PL2 329 aa8.82□□□□□ -1
USE1-203ENST00000593597 PITX2Q99697 317 aa8.82□□□□□ -1
USE1-203ENST00000593597 ADAT1Q9BUB4 502 aaKnown RBP8.82□□□□□ -1
USE1-203ENST00000593597 HCAR1Q9BXC0 346 aa8.82□□□□□ -1
USE1-203ENST00000593597 NDEL1Q9GZM8 345 aa8.82□□□□□ -1
USE1-203ENST00000593597 MYLK2Q9H1R3 596 aa8.82□□□□□ -1
USE1-203ENST00000593597 PPP1R3EQ9H7J1 279 aa8.82□□□□□ -1
USE1-203ENST00000593597 AURKCQ9UQB9 309 aa8.82□□□□□ -1
USE1-203ENST00000593597 TVP23AA6NH52 213 aa8.81□□□□□ -1
USE1-203ENST00000593597 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.81□□□□□ -1
USE1-203ENST00000593597 M0R135 149 aa8.81□□□□□ -1
USE1-203ENST00000593597 LGALS8O00214 317 aa8.81□□□□□ -1
USE1-203ENST00000593597 ENSAO43768 121 aaKnown RBP8.81□□□□□ -1
USE1-203ENST00000593597 NDUFA7O95182 113 aa8.81□□□□□ -1
USE1-203ENST00000593597 SLC6A6P31641 620 aa8.81□□□□□ -1
USE1-203ENST00000593597 SPIBQ01892 262 aa8.81□□□□□ -1
USE1-203ENST00000593597 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.81□□□□□ -1
USE1-203ENST00000593597 POU4F2Q12837 409 aa8.81□□□□□ -1
USE1-203ENST00000593597 OR8G1Q15617 311 aa8.81□□□□□ -1
USE1-203ENST00000593597 OCLNQ16625 522 aa8.81□□□□□ -1
USE1-203ENST00000593597 SLC35F1Q5T1Q4 408 aa8.81□□□□□ -1
USE1-203ENST00000593597 GPR157Q5UAW9 335 aa8.81□□□□□ -1
USE1-203ENST00000593597 OLFML2AQ68BL7 652 aa8.81□□□□□ -1
USE1-203ENST00000593597 PGBD2Q6P3X8 592 aa8.81□□□□□ -1
USE1-203ENST00000593597 PGAP1Q75T13 922 aa8.81□□□□□ -1
USE1-203ENST00000593597 C11orf53Q8IXP5 236 aa8.81□□□□□ -1
USE1-203ENST00000593597 BOLLQ8N9W6 283 aaKnown RBP8.81□□□□□ -1
USE1-203ENST00000593597 CYB561A3Q8NBI2 242 aa8.81□□□□□ -1
USE1-203ENST00000593597 ERGIC1Q969X5 290 aa8.81□□□□□ -1
USE1-203ENST00000593597 ZNF799Q96GE5 643 aa8.81□□□□□ -1
USE1-203ENST00000593597 MMADHCQ9H3L0 296 aaPredicted RBP8.81□□□□□ -1
USE1-203ENST00000593597 EGLN3Q9H6Z9 239 aa8.81□□□□□ -1
USE1-203ENST00000593597 EFCAB1Q9HAE3 211 aa8.81□□□□□ -1
USE1-203ENST00000593597 NOX4Q9NPH5 578 aa8.81□□□□□ -1
USE1-203ENST00000593597 RNF7Q9UBF6 113 aa8.81□□□□□ -1
USE1-203ENST00000593597 IGHV3OR15-7A0A075B7D8 119 aa8.8□□□□□ -1
USE1-203ENST00000593597 A0A0U1RQK1 487 aa8.8□□□□□ -1
USE1-203ENST00000593597 P2RY10O00398 339 aa8.8□□□□□ -1
USE1-203ENST00000593597 BHLHE40O14503 412 aa8.8□□□□□ -1
USE1-203ENST00000593597 ADAM20O43506 726 aa8.8□□□□□ -1
USE1-203ENST00000593597 TOX4O94842 621 aa8.8□□□□□ -1
USE1-203ENST00000593597 GADD45GO95257 159 aa8.8□□□□□ -1
USE1-203ENST00000593597 RENP00797 406 aa8.8□□□□□ -1
USE1-203ENST00000593597 KNG1P01042 644 aa8.8□□□□□ -1
USE1-203ENST00000593597 LHBP01229 141 aa8.8□□□□□ -1
USE1-203ENST00000593597 IGHV4-59P01825 116 aa8.8□□□□□ -1
USE1-203ENST00000593597 GYPAP02724 150 aa8.8□□□□□ -1
USE1-203ENST00000593597 SLC2A1P11166 492 aa8.8□□□□□ -1
USE1-203ENST00000593597 AMY2BP19961 511 aa8.8□□□□□ -1
USE1-203ENST00000593597 MSX2P35548 267 aaPredicted RBP8.8□□□□□ -1
USE1-203ENST00000593597 DLX1P56177 255 aa8.8□□□□□ -1
USE1-203ENST00000593597 PRB3Q04118 309 aaPredicted RBP8.8□□□□□ -1
USE1-203ENST00000593597 ASPHD2Q6ICH7 369 aa8.8□□□□□ -1
USE1-203ENST00000593597 MRPL21Q7Z2W9 205 aaKnown RBP8.8□□□□□ -1
USE1-203ENST00000593597 PIP4P2Q8N4L2 257 aa8.8□□□□□ -1
USE1-203ENST00000593597 OR9Q2Q8NGE9 314 aa8.8□□□□□ -1
USE1-203ENST00000593597 OR56B2PQ8NGI1 322 aa8.8□□□□□ -1
USE1-203ENST00000593597 OR51L1Q8NGJ5 315 aa8.8□□□□□ -1
USE1-203ENST00000593597 OR11L1Q8NGX0 322 aa8.8□□□□□ -1
USE1-203ENST00000593597 ZDHHC16Q969W1 377 aa8.8□□□□□ -1
USE1-203ENST00000593597 SEH1LQ96EE3 360 aa8.8□□□□□ -1
USE1-203ENST00000593597 WDFY2Q96P53 400 aa8.8□□□□□ -1
USE1-203ENST00000593597 BTBD10Q9BSF8 475 aa8.8□□□□□ -1
USE1-203ENST00000593597 IFT27Q9BW83 186 aa8.8□□□□□ -1
USE1-203ENST00000593597 SEMA6AQ9H2E6 1030 aa8.8□□□□□ -1
USE1-203ENST00000593597 GORASP2Q9H8Y8 452 aa8.8□□□□□ -1
USE1-203ENST00000593597 C1orf123Q9NWV4 160 aa8.8□□□□□ -1
USE1-203ENST00000593597 SAMD4AQ9UPU9 718 aaKnown RBP8.8□□□□□ -1
USE1-203ENST00000593597 FAM32AQ9Y421 112 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms