RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 SULT2B1O00204 365 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 CDC42EP2O14613 210 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 PHYHO14832 338 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 TO15178 435 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 P2RX6O15547 441 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 EMC8O43402 210 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 XRCC3O43542 346 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 VEGFDO43915 354 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 TMPRSS11DO60235 418 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 EIF1BO60739 113 aaKnown RBP3.68□□□□□ -1.82
LIG3-211ENST00000588713 CLEC3AO75596 197 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 EIF3GO75821 320 aaKnown RBP eCLIP3.68□□□□□ -1.82
LIG3-211ENST00000588713 ZNF432O94892 652 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 SLC2A10O95528 541 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 TBX6O95947 436 aaPredicted RBP3.68□□□□□ -1.82
LIG3-211ENST00000588713 WNT11O96014 354 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 AK1P00568 194 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 SP1P08047 785 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 CELA2AP08217 269 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 IFI6P09912 130 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 SPP1P10451 314 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 TPT1P13693 172 aaKnown RBP3.68□□□□□ -1.82
LIG3-211ENST00000588713 ZNF16P17020 682 aaPredicted RBP3.68□□□□□ -1.82
LIG3-211ENST00000588713 ZNF19P17023 458 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 HLA-GP17693 338 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 RPS4Y1P22090 263 aaKnown RBP3.68□□□□□ -1.82
LIG3-211ENST00000588713 CDK2P24941 298 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 EDNRAP25101 427 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 PTAFRP25105 342 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 BDKRB2P30411 391 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 SLC6A6P31641 620 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 DCTDP32321 178 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 PYCR1P32322 319 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 TRHRP34981 398 aaPredicted RBP3.68□□□□□ -1.82
LIG3-211ENST00000588713 AHRP35869 848 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 ACVR1BP36896 505 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 PMELP40967 661 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 EIF1P41567 113 aaKnown RBP3.68□□□□□ -1.82
LIG3-211ENST00000588713 RBM34P42696 430 aaKnown RBP3.68□□□□□ -1.82
LIG3-211ENST00000588713 SSR2P43308 183 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 COMPP49747 757 aaPredicted RBP3.68□□□□□ -1.82
LIG3-211ENST00000588713 LUMP51884 338 aaPredicted RBP3.68□□□□□ -1.82
LIG3-211ENST00000588713 NCBP2P52298 156 aaKnown RBP eCLIP3.68□□□□□ -1.82
LIG3-211ENST00000588713 OR12D2P58182 307 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 FXYD6P3P58550 94 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 TAS2R19P59542 299 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 UBE2IP63279 158 aaKnown RBP3.68□□□□□ -1.82
LIG3-211ENST00000588713 TMEM115Q12893 351 aaPredicted RBP3.68□□□□□ -1.82
LIG3-211ENST00000588713 SERTAD2Q14140 314 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 GPR18Q14330 331 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 LASP1Q14847 261 aaKnown RBP3.68□□□□□ -1.82
LIG3-211ENST00000588713 PEA15Q15121 130 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 HMGN3Q15651 99 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 ACKR1Q16570 336 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 NKPD1Q17RQ9 610 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 PCGF3Q3KNV8 242 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 TMEM35AQ53FP2 167 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 LY6G6FQ5SQ64 297 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 HES5Q5TA89 166 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 DCAF12L2Q5VW00 463 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 C18orf63Q68DL7 685 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 C11orf87Q6NUJ2 197 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 H3F3CQ6NXT2 135 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 FBXO42Q6P3S6 717 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 CORO6Q6QEF8 472 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 C5orf46Q6UWT4 87 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 WDR88Q6ZMY6 472 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 ZNF836Q6ZNA1 936 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 RFLNAQ6ZTI6 216 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 ACOT7LQ6ZUV0 252 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 TMPRSS11FQ6ZWK6 438 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 PRSS45Q7RTY3 260 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 FAM220AQ7Z4H9 259 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.68□□□□□ -1.82
LIG3-211ENST00000588713 KMT5CQ86Y97 462 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 CBLN2Q8IUK8 224 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 NKAIN4Q8IVV8 208 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 SLC35F2Q8IXU6 374 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 IZUMO1Q8IYV9 350 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 BEST3Q8N1M1 668 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 MUC20Q8N307 709 aaPredicted RBP3.68□□□□□ -1.82
LIG3-211ENST00000588713 RFLNBQ8N5W9 214 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 RASGEF1AQ8N9B8 481 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 AVL9Q8NBF6 648 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 RELL2Q8NC24 303 aaPredicted RBP3.68□□□□□ -1.82
LIG3-211ENST00000588713 SLC30A7Q8NEW0 376 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 TMEM185AQ8NFB2 350 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 STEAP2Q8NFT2 490 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 OR52B4Q8NGK2 314 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 OR13C5Q8NGS8 318 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 TMEM255BQ8WV15 326 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 XAGE5Q8WWM1 108 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 TFGQ92734 400 aaPredicted RBP3.68□□□□□ -1.82
LIG3-211ENST00000588713 PELI1Q96FA3 418 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 PEX11GQ96HA9 241 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 ART5Q96L15 291 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 MS4A4EQ96PG1 132 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 OR14A2Q96R54 314 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 OR1F2PQ96R84 312 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 OR7D2Q96RA2 312 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms