RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 C4orf36Q96KX1 117 aa13.89□□□□□ -0.19
ATG4D-205ENST00000586477 SMR3AQ99954 134 aa13.89□□□□□ -0.19
ATG4D-205ENST00000586477 RHNO1Q9BSD3 238 aa13.89□□□□□ -0.19
ATG4D-205ENST00000586477 OPA3Q9H6K4 179 aa13.89□□□□□ -0.19
ATG4D-205ENST00000586477 ZNF696Q9H7X3 374 aa13.89□□□□□ -0.19
ATG4D-205ENST00000586477 PAK1IP1Q9NWT1 392 aaPredicted RBP13.89□□□□□ -0.19
ATG4D-205ENST00000586477 SLCO1C1Q9NYB5 712 aa13.89□□□□□ -0.19
ATG4D-205ENST00000586477 ERVK-18Q9QC07 812 aa13.89□□□□□ -0.19
ATG4D-205ENST00000586477 GRIP1Q9Y3R0 1128 aa13.89□□□□□ -0.19
ATG4D-205ENST00000586477 A0A087WXM4 84 aa13.88□□□□□ -0.19
ATG4D-205ENST00000586477 LOC110117498-PIK3R3F6TDL0 507 aa13.88□□□□□ -0.19
ATG4D-205ENST00000586477 H3BSA7 217 aa13.88□□□□□ -0.19
ATG4D-205ENST00000586477 J3QLW9 94 aa13.88□□□□□ -0.19
ATG4D-205ENST00000586477 OVOL3O00110 214 aa13.88□□□□□ -0.19
ATG4D-205ENST00000586477 ABCD4O14678 606 aa13.88□□□□□ -0.19
ATG4D-205ENST00000586477 ANXA2P07355 339 aaKnown RBP13.88□□□□□ -0.19
ATG4D-205ENST00000586477 CELA3BP08861 270 aa13.88□□□□□ -0.19
ATG4D-205ENST00000586477 ACSM4P0C7M7 580 aa13.88□□□□□ -0.19
ATG4D-205ENST00000586477 ZNF19P17023 458 aa13.88□□□□□ -0.19
ATG4D-205ENST00000586477 HOXB4P17483 251 aaPredicted RBP13.88□□□□□ -0.19
ATG4D-205ENST00000586477 CFL1P23528 166 aaKnown RBP13.88□□□□□ -0.19
ATG4D-205ENST00000586477 C21orf33P30042 268 aaPredicted RBP13.88□□□□□ -0.19
ATG4D-205ENST00000586477 ETV1P50549 477 aa13.88□□□□□ -0.19
ATG4D-205ENST00000586477 PRKXP51817 358 aa13.88□□□□□ -0.19
ATG4D-205ENST00000586477 ZNF684Q5T5D7 378 aa13.88□□□□□ -0.19
ATG4D-205ENST00000586477 LIPNQ5VXI9 398 aa13.88□□□□□ -0.19
ATG4D-205ENST00000586477 ZNF773Q6PK81 442 aa13.88□□□□□ -0.19
ATG4D-205ENST00000586477 SLC22A25Q6T423 547 aa13.88□□□□□ -0.19
ATG4D-205ENST00000586477 SSX6Q7RTT6 188 aa13.88□□□□□ -0.19
ATG4D-205ENST00000586477 PIAS4Q8N2W9 510 aaPredicted RBP13.88□□□□□ -0.19
ATG4D-205ENST00000586477 NUP37Q8NFH4 326 aa13.88□□□□□ -0.19
ATG4D-205ENST00000586477 C1QTNF5Q9BXJ0 243 aa13.88□□□□□ -0.19
ATG4D-205ENST00000586477 OR10A2Q9H208 303 aa13.88□□□□□ -0.19
ATG4D-205ENST00000586477 RGCCQ9H4X1 137 aa13.88□□□□□ -0.19
ATG4D-205ENST00000586477 MRM2Q9UI43 246 aaKnown RBP13.88□□□□□ -0.19
ATG4D-205ENST00000586477 POU2F3Q9UKI9 436 aa13.88□□□□□ -0.19
ATG4D-205ENST00000586477 R4GMQ9 66 aa13.88□□□□□ -0.19
ATG4D-205ENST00000586477 TRIM64A6NGJ6 449 aa13.87□□□□□ -0.19
ATG4D-205ENST00000586477 CD8AP01732 235 aa13.87□□□□□ -0.19
ATG4D-205ENST00000586477 LCATP04180 440 aa13.87□□□□□ -0.19
ATG4D-205ENST00000586477 NR4A1P22736 598 aa13.87□□□□□ -0.19
ATG4D-205ENST00000586477 UCP2P55851 309 aa13.87□□□□□ -0.19
ATG4D-205ENST00000586477 OR12D2P58182 307 aa13.87□□□□□ -0.19
ATG4D-205ENST00000586477 BDH1Q02338 343 aa13.87□□□□□ -0.19
ATG4D-205ENST00000586477 TP53I3Q53FA7 332 aa13.87□□□□□ -0.19
ATG4D-205ENST00000586477 PRSS57Q6UWY2 283 aa13.87□□□□□ -0.19
ATG4D-205ENST00000586477 RFLNBQ8N5W9 214 aa13.87□□□□□ -0.19
ATG4D-205ENST00000586477 NANOGP1Q8N7R0 232 aa13.87□□□□□ -0.19
ATG4D-205ENST00000586477 TSPAN14Q8NG11 270 aa13.87□□□□□ -0.19
ATG4D-205ENST00000586477 Q96MF0 132 aa13.87□□□□□ -0.19
ATG4D-205ENST00000586477 SIGLEC11Q96RL6 698 aa13.87□□□□□ -0.19
ATG4D-205ENST00000586477 TTTY10Q9BZA0 68 aa13.87□□□□□ -0.19
ATG4D-205ENST00000586477 ACOXLQ9NUZ1 547 aa13.87□□□□□ -0.19
ATG4D-205ENST00000586477 BABAM2Q9NXR7 383 aa13.87□□□□□ -0.19
ATG4D-205ENST00000586477 LAMP3Q9UQV4 416 aa13.87□□□□□ -0.19
ATG4D-205ENST00000586477 CSPG4Q6UVK1 2322 aa13.87□□□□□ -0.19
ATG4D-205ENST00000586477 PSMD9O00233 223 aa13.86□□□□□ -0.19
ATG4D-205ENST00000586477 XRCC2O43543 280 aa13.86□□□□□ -0.19
ATG4D-205ENST00000586477 MT-ND2P03891 347 aa13.86□□□□□ -0.19
ATG4D-205ENST00000586477 HTR1AP08908 422 aa13.86□□□□□ -0.19
ATG4D-205ENST00000586477 DBHP09172 617 aa13.86□□□□□ -0.19
ATG4D-205ENST00000586477 INHBBP09529 407 aa13.86□□□□□ -0.19
ATG4D-205ENST00000586477 TGM4P49221 684 aa13.86□□□□□ -0.19
ATG4D-205ENST00000586477 CCR9P51686 369 aa13.86□□□□□ -0.19
ATG4D-205ENST00000586477 ZNF121P58317 390 aaPredicted RBP13.86□□□□□ -0.19
ATG4D-205ENST00000586477 SELENOVP59797 346 aa13.86□□□□□ -0.19
ATG4D-205ENST00000586477 IRF3Q14653 427 aa13.86□□□□□ -0.19
ATG4D-205ENST00000586477 SPHARQ15513 63 aa13.86□□□□□ -0.19
ATG4D-205ENST00000586477 BCL2L15Q5TBC7 163 aa13.86□□□□□ -0.19
ATG4D-205ENST00000586477 FDX2Q6P4F2 183 aa13.86□□□□□ -0.19
ATG4D-205ENST00000586477 COLCA1Q6ZS62 124 aa13.86□□□□□ -0.19
ATG4D-205ENST00000586477 ABHD4Q8TB40 342 aa13.86□□□□□ -0.19
ATG4D-205ENST00000586477 TMEM171Q8WVE6 324 aa13.86□□□□□ -0.19
ATG4D-205ENST00000586477 SPRYD4Q8WW59 207 aaPredicted RBP13.86□□□□□ -0.19
ATG4D-205ENST00000586477 SLC7A6Q92536 515 aa13.86□□□□□ -0.19
ATG4D-205ENST00000586477 FBXW5Q969U6 566 aa13.86□□□□□ -0.19
ATG4D-205ENST00000586477 PELI1Q96FA3 418 aa13.86□□□□□ -0.19
ATG4D-205ENST00000586477 PGAM5Q96HS1 289 aa13.86□□□□□ -0.19
ATG4D-205ENST00000586477 ZNF649Q9BS31 505 aa13.86□□□□□ -0.19
ATG4D-205ENST00000586477 NUFIP1Q9UHK0 495 aaKnown RBP13.86□□□□□ -0.19
ATG4D-205ENST00000586477 FN1P02751 2386 aaKnown RBP13.86□□□□□ -0.19
ATG4D-205ENST00000586477 MAGEA13PA6NCF6 341 aa13.85□□□□□ -0.19
ATG4D-205ENST00000586477 TRIM64BA6NI03 449 aa13.85□□□□□ -0.19
ATG4D-205ENST00000586477 E7EQL1 145 aa13.85□□□□□ -0.19
ATG4D-205ENST00000586477 ATP6V1G2-DDX39BF2Z307 99 aa13.85□□□□□ -0.19
ATG4D-205ENST00000586477 RPP14O95059 124 aaKnown RBP13.85□□□□□ -0.19
ATG4D-205ENST00000586477 CCL2P13500 99 aa13.85□□□□□ -0.19
ATG4D-205ENST00000586477 GLRXP35754 106 aa13.85□□□□□ -0.19
ATG4D-205ENST00000586477 ACSM1Q08AH1 577 aa13.85□□□□□ -0.19
ATG4D-205ENST00000586477 SNTB2Q13425 540 aaKnown RBP13.85□□□□□ -0.19
ATG4D-205ENST00000586477 MED22Q15528 200 aa13.85□□□□□ -0.19
ATG4D-205ENST00000586477 RPL22L1Q6P5R6 122 aaKnown RBP13.85□□□□□ -0.19
ATG4D-205ENST00000586477 Q71RC1 249 aaPredicted RBP13.85□□□□□ -0.19
ATG4D-205ENST00000586477 ZNF367Q7RTV3 350 aa13.85□□□□□ -0.19
ATG4D-205ENST00000586477 MYPOPQ86VE0 399 aaPredicted RBP13.85□□□□□ -0.19
ATG4D-205ENST00000586477 CCDC54Q8NEL0 328 aa13.85□□□□□ -0.19
ATG4D-205ENST00000586477 OR1J1Q8NGS3 322 aa13.85□□□□□ -0.19
ATG4D-205ENST00000586477 COX4I2Q96KJ9 171 aa13.85□□□□□ -0.19
ATG4D-205ENST00000586477 COMMD4Q9H0A8 199 aa13.85□□□□□ -0.19
ATG4D-205ENST00000586477 ZNF442Q9H7R0 627 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms