RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 SOD3P08294 240 aa12.52□□□□□ -0.41
SCAMP4-209ENST00000585335 LIPAP38571 399 aa12.52□□□□□ -0.41
SCAMP4-209ENST00000585335 GBX2P52951 348 aaPredicted RBP12.52□□□□□ -0.41
SCAMP4-209ENST00000585335 GFOD2Q3B7J2 385 aa12.52□□□□□ -0.41
SCAMP4-209ENST00000585335 SNAI3Q3KNW1 292 aa12.52□□□□□ -0.41
SCAMP4-209ENST00000585335 ZNF684Q5T5D7 378 aa12.52□□□□□ -0.41
SCAMP4-209ENST00000585335 LIPNQ5VXI9 398 aa12.52□□□□□ -0.41
SCAMP4-209ENST00000585335 COMMD2Q86X83 199 aa12.52□□□□□ -0.41
SCAMP4-209ENST00000585335 NINJ1Q92982 152 aa12.52□□□□□ -0.41
SCAMP4-209ENST00000585335 HAVCR1Q96D42 359 aa12.52□□□□□ -0.41
SCAMP4-209ENST00000585335 CMBLQ96DG6 245 aa12.52□□□□□ -0.41
SCAMP4-209ENST00000585335 RHNO1Q9BSD3 238 aa12.52□□□□□ -0.41
SCAMP4-209ENST00000585335 PBOV1Q9GZY1 135 aa12.52□□□□□ -0.41
SCAMP4-209ENST00000585335 CYSLTR2Q9NS75 346 aa12.52□□□□□ -0.41
SCAMP4-209ENST00000585335 ACOXLQ9NUZ1 547 aa12.52□□□□□ -0.41
SCAMP4-209ENST00000585335 FKBP14Q9NWM8 211 aa12.52□□□□□ -0.41
SCAMP4-209ENST00000585335 FAM206AQ9NX38 181 aa12.52□□□□□ -0.41
SCAMP4-209ENST00000585335 TAAR3PQ9P1P4 343 aa12.52□□□□□ -0.41
SCAMP4-209ENST00000585335 NUFIP1Q9UHK0 495 aaKnown RBP12.52□□□□□ -0.41
SCAMP4-209ENST00000585335 ERGIC3Q9Y282 383 aa12.52□□□□□ -0.41
SCAMP4-209ENST00000585335 CAB39Q9Y376 341 aaPredicted RBP12.52□□□□□ -0.41
SCAMP4-209ENST00000585335 CRYBG3Q68DQ2 2970 aa12.51□□□□□ -0.41
SCAMP4-209ENST00000585335 RAI1Q7Z5J4 1906 aaPredicted RBP12.51□□□□□ -0.41
SCAMP4-209ENST00000585335 IGLV3-9A0A075B6K5 115 aa12.51□□□□□ -0.41
SCAMP4-209ENST00000585335 A0A0U1RQV5 110 aa12.51□□□□□ -0.41
SCAMP4-209ENST00000585335 GGT3PA6NGU5 568 aa12.51□□□□□ -0.41
SCAMP4-209ENST00000585335 CDK1P06493 297 aa12.51□□□□□ -0.41
SCAMP4-209ENST00000585335 HTR1AP08908 422 aa12.51□□□□□ -0.41
SCAMP4-209ENST00000585335 KITLGP21583 273 aa12.51□□□□□ -0.41
SCAMP4-209ENST00000585335 EEF1B2P24534 225 aaKnown RBP12.51□□□□□ -0.41
SCAMP4-209ENST00000585335 MPV17P39210 176 aa12.51□□□□□ -0.41
SCAMP4-209ENST00000585335 ETV1P50549 477 aa12.51□□□□□ -0.41
SCAMP4-209ENST00000585335 OR12D2P58182 307 aa12.51□□□□□ -0.41
SCAMP4-209ENST00000585335 GK2Q14410 553 aaPredicted RBP12.51□□□□□ -0.41
SCAMP4-209ENST00000585335 GLYATL3Q5SZD4 288 aa12.51□□□□□ -0.41
SCAMP4-209ENST00000585335 PRSS45Q7RTY3 260 aa12.51□□□□□ -0.41
SCAMP4-209ENST00000585335 CDH24Q86UP0 819 aa12.51□□□□□ -0.41
SCAMP4-209ENST00000585335 OR8B12Q8NGG6 310 aa12.51□□□□□ -0.41
SCAMP4-209ENST00000585335 OR52N1Q8NH53 320 aa12.51□□□□□ -0.41
SCAMP4-209ENST00000585335 SPRYD4Q8WW59 207 aaPredicted RBP12.51□□□□□ -0.41
SCAMP4-209ENST00000585335 ITFG2Q969R8 447 aa12.51□□□□□ -0.41
SCAMP4-209ENST00000585335 TRMT61AQ96FX7 289 aaKnown RBP12.51□□□□□ -0.41
SCAMP4-209ENST00000585335 REEP6Q96HR9 211 aa12.51□□□□□ -0.41
SCAMP4-209ENST00000585335 SIGLEC11Q96RL6 698 aa12.51□□□□□ -0.41
SCAMP4-209ENST00000585335 YTHDF1Q9BYJ9 559 aaKnown RBP12.51□□□□□ -0.41
SCAMP4-209ENST00000585335 MS4A5Q9H3V2 200 aa12.51□□□□□ -0.41
SCAMP4-209ENST00000585335 POFUT1Q9H488 388 aa12.51□□□□□ -0.41
SCAMP4-209ENST00000585335 PURGQ9UJV8 347 aaKnown RBP12.51□□□□□ -0.41
SCAMP4-209ENST00000585335 OR52A1Q9UKL2 312 aa12.51□□□□□ -0.41
SCAMP4-209ENST00000585335 PLEKHA6Q9Y2H5 1048 aa12.51□□□□□ -0.41
SCAMP4-209ENST00000585335 NOP16Q9Y3C1 178 aaKnown RBP12.51□□□□□ -0.41
SCAMP4-209ENST00000585335 RGS10O43665 173 aa12.5□□□□□ -0.41
SCAMP4-209ENST00000585335 CLPTM1O96005 669 aa12.5□□□□□ -0.41
SCAMP4-209ENST00000585335 RPSAP08865 295 aaKnown RBP12.5□□□□□ -0.41
SCAMP4-209ENST00000585335 LIMS3P0CW19 117 aa12.5□□□□□ -0.41
SCAMP4-209ENST00000585335 LIMS4P0CW20 117 aa12.5□□□□□ -0.41
SCAMP4-209ENST00000585335 CD53P19397 219 aa12.5□□□□□ -0.41
SCAMP4-209ENST00000585335 CRHBPP24387 322 aa12.5□□□□□ -0.41
SCAMP4-209ENST00000585335 PPOXP50336 477 aa12.5□□□□□ -0.41
SCAMP4-209ENST00000585335 SLC35A2P78381 396 aa12.5□□□□□ -0.41
SCAMP4-209ENST00000585335 MFGE8Q08431 387 aaPredicted RBP12.5□□□□□ -0.41
SCAMP4-209ENST00000585335 PSG7Q13046 419 aa12.5□□□□□ -0.41
SCAMP4-209ENST00000585335 HLXQ14774 488 aaPredicted RBP12.5□□□□□ -0.41
SCAMP4-209ENST00000585335 SWI5Q1ZZU3 235 aa12.5□□□□□ -0.41
SCAMP4-209ENST00000585335 C11orf71Q6IPW1 123 aa12.5□□□□□ -0.41
SCAMP4-209ENST00000585335 LRP11Q86VZ4 500 aa12.5□□□□□ -0.41
SCAMP4-209ENST00000585335 FTMTQ8N4E7 242 aa12.5□□□□□ -0.41
SCAMP4-209ENST00000585335 OR2AE1Q8NHA4 323 aa12.5□□□□□ -0.41
SCAMP4-209ENST00000585335 NRGNQ92686 78 aa12.5□□□□□ -0.41
SCAMP4-209ENST00000585335 RORBQ92753 470 aa12.5□□□□□ -0.41
SCAMP4-209ENST00000585335 SPSB4Q96A44 273 aa12.5□□□□□ -0.41
SCAMP4-209ENST00000585335 PELI1Q96FA3 418 aa12.5□□□□□ -0.41
SCAMP4-209ENST00000585335 MND1Q9BWT6 205 aa12.5□□□□□ -0.41
SCAMP4-209ENST00000585335 CACNG6Q9BXT2 260 aa12.5□□□□□ -0.41
SCAMP4-209ENST00000585335 CCDC90BQ9GZT6 254 aa12.5□□□□□ -0.41
SCAMP4-209ENST00000585335 LIME1Q9H400 295 aa12.5□□□□□ -0.41
SCAMP4-209ENST00000585335 BEX4Q9NWD9 120 aaPredicted RBP12.5□□□□□ -0.41
SCAMP4-209ENST00000585335 PCDHGB5Q9Y5G0 923 aa12.5□□□□□ -0.41
SCAMP4-209ENST00000585335 PLCE1Q9P212 2302 aa12.5□□□□□ -0.41
SCAMP4-209ENST00000585335 TMEM129A0AVI4 362 aa12.49□□□□□ -0.41
SCAMP4-209ENST00000585335 IQCF6A8MYZ5 107 aa12.49□□□□□ -0.41
SCAMP4-209ENST00000585335 SRSF10O75494 262 aaKnown RBP12.49□□□□□ -0.41
SCAMP4-209ENST00000585335 MTRF1O75570 445 aaKnown RBP12.49□□□□□ -0.41
SCAMP4-209ENST00000585335 CD8AP01732 235 aa12.49□□□□□ -0.41
SCAMP4-209ENST00000585335 UBCP0CG48 685 aaKnown RBP12.49□□□□□ -0.41
SCAMP4-209ENST00000585335 DDOSTP39656 456 aa12.49□□□□□ -0.41
SCAMP4-209ENST00000585335 PSMB10P40306 273 aa12.49□□□□□ -0.41
SCAMP4-209ENST00000585335 ALDH3B1P43353 468 aa12.49□□□□□ -0.41
SCAMP4-209ENST00000585335 GABARAPL2P60520 117 aa12.49□□□□□ -0.41
SCAMP4-209ENST00000585335 ZNF92Q03936 586 aa12.49□□□□□ -0.41
SCAMP4-209ENST00000585335 MSMPQ1L6U9 139 aa12.49□□□□□ -0.41
SCAMP4-209ENST00000585335 MST1LQ2TV78 715 aa12.49□□□□□ -0.41
SCAMP4-209ENST00000585335 RNLSQ5VYX0 342 aa12.49□□□□□ -0.41
SCAMP4-209ENST00000585335 OR2T2Q6IF00 324 aa12.49□□□□□ -0.41
SCAMP4-209ENST00000585335 FDX2Q6P4F2 183 aa12.49□□□□□ -0.41
SCAMP4-209ENST00000585335 CATSPERDQ86XM0 798 aa12.49□□□□□ -0.41
SCAMP4-209ENST00000585335 ELMOD2Q8IZ81 293 aa12.49□□□□□ -0.41
SCAMP4-209ENST00000585335 CCDC54Q8NEL0 328 aa12.49□□□□□ -0.41
SCAMP4-209ENST00000585335 SGK3Q96BR1 496 aa12.49□□□□□ -0.41
SCAMP4-209ENST00000585335 VRK1Q99986 396 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms