RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 OR8B12Q8NGG6 310 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 OR51S1Q8NGJ8 323 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 CHAC2Q8WUX2 184 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 ZFP64Q9NPA5 681 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 DNAJB11Q9UBS4 358 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 LRP4O75096 1905 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 DHHO43323 396 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 ORC5O43913 435 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 IGHV3-13P01766 116 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 IGHV3-7P01780 117 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 TFF1P04155 84 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 AMY2AP04746 511 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 HTR3AP46098 478 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 SSPNQ14714 243 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 FAM180AQ6UWF9 173 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 GLIPR1L1Q6UWM5 242 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 ARMC10Q8N2F6 343 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 MEIOBQ8N635 442 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 ASB5Q8WWX0 329 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 HDHD3Q9BSH5 251 aaPredicted RBP9.08□□□□□ -0.96
RFFL-212ENST00000584655 JAM3Q9BX67 310 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 CNTD2Q9H8S5 307 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 SLC7A10Q9NS82 523 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 ABCA12Q86UK0 2595 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 C13orf42A0A1B0GVH6 325 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 NXPH3O95157 252 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 KNG1P01042 644 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 PMP2P02689 132 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 ATF4P18848 351 aaPredicted RBP9.07□□□□□ -0.96
RFFL-212ENST00000584655 FXYD4P59646 89 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 PMPCAQ10713 525 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 HNF4GQ14541 408 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 PIAS4Q8N2W9 510 aaPredicted RBP9.07□□□□□ -0.96
RFFL-212ENST00000584655 NOXO1Q8NFA2 376 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 FCAMRQ8WWV6 532 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 TINAGL1Q9GZM7 467 aaPredicted RBP9.07□□□□□ -0.96
RFFL-212ENST00000584655 PROK2Q9HC23 129 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 CACNG2Q9Y698 323 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 POM121CA8CG34 1229 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 ZNF878C9JN71 531 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 TO15178 435 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 SYNGR4O95473 234 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 HRGP04196 525 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 SERPINA7P05543 415 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 CXCL3P19876 107 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 HTR2CP28335 458 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 FGF9P31371 208 aaPredicted RBP9.07□□□□□ -0.96
RFFL-212ENST00000584655 RHOUQ7L0Q8 258 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 C1QL2Q7Z5L3 287 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 OR10S1Q8NGN2 331 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 ZNF488Q96MN9 340 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 NMNAT2Q9BZQ4 307 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 CHST6Q9GZX3 395 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 EXOSC3Q9NQT5 275 aaKnown RBP9.07□□□□□ -0.96
RFFL-212ENST00000584655 PRSS50Q9UI38 385 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 A0A0B4J293 547 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 J3QRE1 110 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 ZNF93P35789 620 aaPredicted RBP9.07□□□□□ -0.96
RFFL-212ENST00000584655 RAD52P43351 418 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 DSCR4P56555 118 aaPredicted RBP9.07□□□□□ -0.96
RFFL-212ENST00000584655 ARF1P84077 181 aaKnown RBP9.07□□□□□ -0.96
RFFL-212ENST00000584655 LRRC28Q86X40 367 aaPredicted RBP9.07□□□□□ -0.96
RFFL-212ENST00000584655 ZNF519Q8TB69 540 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 GIMAP1Q8WWP7 306 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 DEDD2Q8WXF8 326 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 TOMM40LQ969M1 308 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 OXGR1Q96P68 337 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 TTTY12Q9BZ98 90 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 OR2B2Q9GZK3 357 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 UFSP2Q9NUQ7 469 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 EIF3KQ9UBQ5 218 aaKnown RBP9.07□□□□□ -0.96
RFFL-212ENST00000584655 MOKQ9UQ07 419 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 CREBBPQ92793 2442 aa9.07□□□□□ -0.96
RFFL-212ENST00000584655 A0A0G2JK05 382 aa9.06□□□□□ -0.96
RFFL-212ENST00000584655 UBE2QL1A1L167 161 aa9.06□□□□□ -0.96
RFFL-212ENST00000584655 E9PQ18 207 aa9.06□□□□□ -0.96
RFFL-212ENST00000584655 K7EM74 188 aa9.06□□□□□ -0.96
RFFL-212ENST00000584655 M0R135 149 aa9.06□□□□□ -0.96
RFFL-212ENST00000584655 GALR2O43603 387 aaPredicted RBP9.06□□□□□ -0.96
RFFL-212ENST00000584655 NPIPB7O75200 414 aa9.06□□□□□ -0.96
RFFL-212ENST00000584655 ALDOBP05062 364 aa9.06□□□□□ -0.96
RFFL-212ENST00000584655 ZNF84P51523 738 aa9.06□□□□□ -0.96
RFFL-212ENST00000584655 RRADP55042 308 aa9.06□□□□□ -0.96
RFFL-212ENST00000584655 TAS2R20P59543 309 aa9.06□□□□□ -0.96
RFFL-212ENST00000584655 LTC4SQ16873 150 aa9.06□□□□□ -0.96
RFFL-212ENST00000584655 RFPL4BQ6ZWI9 263 aa9.06□□□□□ -0.96
RFFL-212ENST00000584655 NOXA1Q86UR1 476 aa9.06□□□□□ -0.96
RFFL-212ENST00000584655 OR2M7Q8NG81 312 aa9.06□□□□□ -0.96
RFFL-212ENST00000584655 OR1J2Q8NGS2 313 aa9.06□□□□□ -0.96
RFFL-212ENST00000584655 ZNF799Q96GE5 643 aa9.06□□□□□ -0.96
RFFL-212ENST00000584655 CHMP1AQ9HD42 196 aaPredicted RBP9.06□□□□□ -0.96
RFFL-212ENST00000584655 DIABLOQ9NR28 239 aa9.06□□□□□ -0.96
RFFL-212ENST00000584655 PCDHGA5Q9Y5G8 931 aa9.06□□□□□ -0.96
RFFL-212ENST00000584655 SGCEO43556 437 aa9.06□□□□□ -0.96
RFFL-212ENST00000584655 RBBP9O75884 186 aa9.06□□□□□ -0.96
RFFL-212ENST00000584655 TGM6O95932 706 aa9.06□□□□□ -0.96
RFFL-212ENST00000584655 NGFP01138 241 aa9.06□□□□□ -0.96
RFFL-212ENST00000584655 DDOSTP39656 456 aa9.06□□□□□ -0.96
RFFL-212ENST00000584655 MTCP1P56278 107 aa9.06□□□□□ -0.96
RFFL-212ENST00000584655 GNG2P59768 71 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 174.9 ms