RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-233	ENST00000584186	RPS2	P15880	293 aa	Known RBP	11.44	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	CA6	P23280	308 aa		11.44	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	ZNF92	Q03936	586 aa		11.44	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	OR8G1	Q15617	311 aa		11.44	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	FAM201A	Q5SY85	155 aa		11.44	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	GLYATL3	Q5SZD4	288 aa		11.44	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	DRAM2	Q6UX65	266 aa		11.44	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	TRPM8	Q7Z2W7	1104 aa		11.44	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	SPATA24	Q86W54	205 aa		11.44	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	BPIFB2	Q8N4F0	458 aa		11.44	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	CANT1	Q8WVQ1	401 aa		11.44	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	SLC6A7	Q99884	636 aa		11.44	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	NMNAT2	Q9BZQ4	307 aa		11.44	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	CMC2	Q9NRP2	79 aa		11.44	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	UFSP2	Q9NUQ7	469 aa		11.44	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	PDP1	Q9P0J1	537 aa	Predicted RBP	11.44	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	OR5V1	Q9UGF6	321 aa		11.44	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	OPN4	Q9UHM6	478 aa		11.44	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186		A0A0A6YYJ9	748 aa		11.43	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	AQP12B	A6NM10	295 aa		11.43	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	CD300LB	A8K4G0	201 aa		11.43	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	TBX1	O43435	398 aa		11.43	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	ANOS1	P23352	680 aa		11.43	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	PMEL	P40967	661 aa		11.43	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	MAB21L1	Q13394	359 aa		11.43	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	EIF2B1	Q14232	305 aa	Known RBP	11.43	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	FLOT2	Q14254	428 aa		11.43	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	DNAL1	Q4LDG9	190 aa		11.43	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	PRAMEF6	Q5VXH4	476 aa		11.43	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	CD300LD	Q6UXZ3	194 aa		11.43	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	TMEM179B	Q7Z7N9	219 aa		11.43	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	ERI1	Q8IV48	349 aa	Known RBP	11.43	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	AQP12A	Q8IXF9	295 aa		11.43	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	C1orf87	Q8N0U7	546 aa		11.43	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	C19orf18	Q8NEA5	215 aa		11.43	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	SEMA6D	Q8NFY4	1073 aa		11.43	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	OR11L1	Q8NGX0	322 aa		11.43	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	BCAS4	Q8TDM0	211 aa		11.43	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	DVL3	Q92997	716 aa	Predicted RBP	11.43	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	KCNJ15	Q99712	375 aa		11.43	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	ADAT1	Q9BUB4	502 aa	Known RBP	11.43	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	OR51V1	Q9H2C8	321 aa		11.43	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	TMEM165	Q9HC07	324 aa		11.43	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	AUP1	Q9Y679	476 aa		11.43	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	ARHGAP32	A7KAX9	2087 aa		11.43	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	PPIAL4E	A0A075B759	164 aa		11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	PPIAL4C	A0A0B4J2A2	164 aa		11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	ZNF878	C9JN71	531 aa		11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186		F5H0A9	414 aa	Predicted RBP	11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	PPIAL4D	F5H284	164 aa		11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	ANXA2	P07355	339 aa	Known RBP	11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	WNT2	P09544	360 aa		11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	PPIAL4F	P0DN26	164 aa		11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	PAICS	P22234	425 aa	Known RBP	11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	HSD11B1	P28845	292 aa		11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	GSTT1	P30711	240 aa		11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	OTX1	P32242	354 aa	Predicted RBP	11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	GRK5	P34947	590 aa		11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	SLC15A1	P46059	708 aa		11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	CX3CR1	P49238	355 aa		11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	BLVRA	P53004	296 aa		11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	ACTG1	P63261	375 aa		11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	ZNF154	Q13106	437 aa		11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	GK3P	Q14409	553 aa		11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	MPPED2	Q15777	294 aa		11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	PCK2	Q16822	640 aa		11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	ARMCX4	Q5H9R4	360 aa		11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	DPY19L4	Q7Z388	723 aa		11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	KLB	Q86Z14	1044 aa		11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	HS3ST5	Q8IZT8	346 aa		11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	BOLL	Q8N9W6	283 aa	Known RBP	11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	DEFB108B	Q8NET1	73 aa		11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	OR6N2	Q8NGY6	317 aa		11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	INTS14	Q96SY0	518 aa		11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	TMEM246	Q9BRR3	403 aa		11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	MRI1	Q9BV20	369 aa		11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	SSBP3	Q9BWW4	388 aa	Predicted RBP	11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	SUCNR1	Q9BXA5	334 aa		11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	ZNF556	Q9HAH1	456 aa		11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	LRCH1	Q9Y2L9	728 aa		11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	NOP16	Q9Y3C1	178 aa	Known RBP	11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	PPIAL4A	Q9Y536	164 aa		11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	INSIG2	Q9Y5U4	225 aa		11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	ANK2	Q01484	3957 aa		11.42	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	WNK2	Q9Y3S1	2297 aa		11.41	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186		A0A1B0GWJ7	208 aa		11.41	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	ARRDC5	A6NEK1	342 aa		11.41	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	FAM20B	O75063	409 aa		11.41	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	PRKACG	P22612	351 aa		11.41	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	FPR2	P25090	351 aa		11.41	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	CD200	P41217	278 aa		11.41	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	GATA4	P43694	442 aa		11.41	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	HILS1	P60008	231 aa		11.41	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	GNB2	P62879	340 aa		11.41	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	GRB2	P62993	217 aa	Known RBP	11.41	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	HOXA4	Q00056	320 aa	Predicted RBP	11.41	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	GINS1	Q14691	196 aa		11.41	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	ZNF181	Q2M3W8	571 aa		11.41	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	GFOD2	Q3B7J2	385 aa		11.41	□□□□□ -0.58
CDK5RAP3-233	ENST00000584186	ZNF404	Q494X3	552 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms