RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 SPRYD4Q8WW59 207 aaPredicted RBP10.69□□□□□ -0.7
SMARCE1-218ENST00000582955 STMN2Q93045 179 aa10.69□□□□□ -0.7
SMARCE1-218ENST00000582955 TIMD4Q96H15 378 aa10.69□□□□□ -0.7
SMARCE1-218ENST00000582955 OR2V2Q96R30 315 aa10.69□□□□□ -0.7
SMARCE1-218ENST00000582955 GABARAPL3Q9BY60 117 aa10.69□□□□□ -0.7
SMARCE1-218ENST00000582955 S100A14Q9HCY8 104 aa10.69□□□□□ -0.7
SMARCE1-218ENST00000582955 LAMP5Q9UJQ1 280 aa10.69□□□□□ -0.7
SMARCE1-218ENST00000582955 KLHDC2Q9Y2U9 406 aa10.69□□□□□ -0.7
SMARCE1-218ENST00000582955 LOC100289279A0A1B0GTE1 492 aa10.68□□□□□ -0.7
SMARCE1-218ENST00000582955 GGT3PA6NGU5 568 aa10.68□□□□□ -0.7
SMARCE1-218ENST00000582955 A8MV72 311 aaPredicted RBP10.68□□□□□ -0.7
SMARCE1-218ENST00000582955 HOXB4P17483 251 aaPredicted RBP10.68□□□□□ -0.7
SMARCE1-218ENST00000582955 TNFRSF1AP19438 455 aa10.68□□□□□ -0.7
SMARCE1-218ENST00000582955 ANOS1P23352 680 aa10.68□□□□□ -0.7
SMARCE1-218ENST00000582955 IL2RGP31785 369 aa10.68□□□□□ -0.7
SMARCE1-218ENST00000582955 OPRL1P41146 370 aa10.68□□□□□ -0.7
SMARCE1-218ENST00000582955 HCCSP53701 268 aa10.68□□□□□ -0.7
SMARCE1-218ENST00000582955 ZNF121P58317 390 aaPredicted RBP10.68□□□□□ -0.7
SMARCE1-218ENST00000582955 SLC3A1Q07837 685 aa10.68□□□□□ -0.7
SMARCE1-218ENST00000582955 LRRN1Q6UXK5 716 aa10.68□□□□□ -0.7
SMARCE1-218ENST00000582955 FAM57BQ71RH2 274 aa10.68□□□□□ -0.7
SMARCE1-218ENST00000582955 RHOUQ7L0Q8 258 aa10.68□□□□□ -0.7
SMARCE1-218ENST00000582955 MEPCEQ7L2J0 689 aaKnown RBP10.68□□□□□ -0.7
SMARCE1-218ENST00000582955 CLDND2Q8NHS1 167 aa10.68□□□□□ -0.7
SMARCE1-218ENST00000582955 ITLN1Q8WWA0 313 aa10.68□□□□□ -0.7
SMARCE1-218ENST00000582955 RAB1CQ92928 201 aa10.68□□□□□ -0.7
SMARCE1-218ENST00000582955 MSI2Q96DH6 328 aaKnown RBP10.68□□□□□ -0.7
SMARCE1-218ENST00000582955 CNN2Q99439 309 aaKnown RBP10.68□□□□□ -0.7
SMARCE1-218ENST00000582955 SLC30A2Q9BRI3 323 aa10.68□□□□□ -0.7
SMARCE1-218ENST00000582955 YIPF3Q9GZM5 350 aa10.68□□□□□ -0.7
SMARCE1-218ENST00000582955 SP140LQ9H930 580 aa10.68□□□□□ -0.7
SMARCE1-218ENST00000582955 BRD7Q9NPI1 651 aa10.68□□□□□ -0.7
SMARCE1-218ENST00000582955 TMEM100Q9NV29 134 aa10.68□□□□□ -0.7
SMARCE1-218ENST00000582955 IL19Q9UHD0 177 aa10.68□□□□□ -0.7
SMARCE1-218ENST00000582955 NSD1Q96L73 2696 aaPredicted RBP10.68□□□□□ -0.7
SMARCE1-218ENST00000582955 ISPDA4D126 451 aa10.67□□□□□ -0.7
SMARCE1-218ENST00000582955 SLC22A31A6NKX4 558 aa10.67□□□□□ -0.7
SMARCE1-218ENST00000582955 CD300LBA8K4G0 201 aa10.67□□□□□ -0.7
SMARCE1-218ENST00000582955 H0YL77 283 aa10.67□□□□□ -0.7
SMARCE1-218ENST00000582955 WNT9BO14905 357 aa10.67□□□□□ -0.7
SMARCE1-218ENST00000582955 XRCC2O43543 280 aa10.67□□□□□ -0.7
SMARCE1-218ENST00000582955 BAG2O95816 211 aa10.67□□□□□ -0.7
SMARCE1-218ENST00000582955 HLA-DPB1P04440 258 aa10.67□□□□□ -0.7
SMARCE1-218ENST00000582955 ALPLP05186 524 aa10.67□□□□□ -0.7
SMARCE1-218ENST00000582955 ALDH3A2P51648 485 aa10.67□□□□□ -0.7
SMARCE1-218ENST00000582955 RAD23AP54725 363 aa10.67□□□□□ -0.7
SMARCE1-218ENST00000582955 HNRNPA0Q13151 305 aaKnown RBP10.67□□□□□ -0.7
SMARCE1-218ENST00000582955 TIGD6Q17RP2 521 aa10.67□□□□□ -0.7
SMARCE1-218ENST00000582955 GFOD2Q3B7J2 385 aa10.67□□□□□ -0.7
SMARCE1-218ENST00000582955 ZIK1Q3SY52 487 aaPredicted RBP10.67□□□□□ -0.7
SMARCE1-218ENST00000582955 AADACL4Q5VUY2 407 aa10.67□□□□□ -0.7
SMARCE1-218ENST00000582955 NXNL2Q5VZ03 156 aa10.67□□□□□ -0.7
SMARCE1-218ENST00000582955 FAM166AQ6J272 317 aa10.67□□□□□ -0.7
SMARCE1-218ENST00000582955 KRT77Q7Z794 578 aa10.67□□□□□ -0.7
SMARCE1-218ENST00000582955 PEG10Q86TG7 708 aaKnown RBP10.67□□□□□ -0.7
SMARCE1-218ENST00000582955 GID4Q8IVV7 300 aa10.67□□□□□ -0.7
SMARCE1-218ENST00000582955 PQLC1Q8N2U9 271 aa10.67□□□□□ -0.7
SMARCE1-218ENST00000582955 CBR4Q8N4T8 237 aa10.67□□□□□ -0.7
SMARCE1-218ENST00000582955 HPS1Q92902 700 aa10.67□□□□□ -0.7
SMARCE1-218ENST00000582955 PGAM5Q96HS1 289 aa10.67□□□□□ -0.7
SMARCE1-218ENST00000582955 SOX7Q9BT81 388 aa10.67□□□□□ -0.7
SMARCE1-218ENST00000582955 C9orf16Q9BUW7 83 aa10.67□□□□□ -0.7
SMARCE1-218ENST00000582955 TTTY10Q9BZA0 68 aa10.67□□□□□ -0.7
SMARCE1-218ENST00000582955 OPA3Q9H6K4 179 aa10.67□□□□□ -0.7
SMARCE1-218ENST00000582955 USE1Q9NZ43 259 aa10.67□□□□□ -0.7
SMARCE1-218ENST00000582955 PPP1R3CQ9UQK1 317 aa10.67□□□□□ -0.7
SMARCE1-218ENST00000582955 WIPI2Q9Y4P8 454 aa10.67□□□□□ -0.7
SMARCE1-218ENST00000582955 FN1P02751 2386 aaKnown RBP10.67□□□□□ -0.7
SMARCE1-218ENST00000582955 YLPM1P49750 1951 aaKnown RBP10.66□□□□□ -0.7
SMARCE1-218ENST00000582955 NF1P21359 2839 aa10.66□□□□□ -0.7
SMARCE1-218ENST00000582955 IGHV3-64DA0A0J9YX35 117 aa10.66□□□□□ -0.7
SMARCE1-218ENST00000582955 F5H5P2 479 aa10.66□□□□□ -0.7
SMARCE1-218ENST00000582955 PSMD9O00233 223 aa10.66□□□□□ -0.7
SMARCE1-218ENST00000582955 MLNRO43193 412 aa10.66□□□□□ -0.7
SMARCE1-218ENST00000582955 TGFAP01135 160 aa10.66□□□□□ -0.7
SMARCE1-218ENST00000582955 ALOX5APP20292 161 aa10.66□□□□□ -0.7
SMARCE1-218ENST00000582955 SRP9P49458 86 aaKnown RBP10.66□□□□□ -0.7
SMARCE1-218ENST00000582955 CDC42P60953 191 aa10.66□□□□□ -0.7
SMARCE1-218ENST00000582955 EFNB1P98172 346 aa10.66□□□□□ -0.7
SMARCE1-218ENST00000582955 OR8G1Q15617 311 aa10.66□□□□□ -0.7
SMARCE1-218ENST00000582955 KCTD18Q6PI47 426 aaPredicted RBP10.66□□□□□ -0.7
SMARCE1-218ENST00000582955 ZNF771Q7L3S4 317 aaPredicted RBP10.66□□□□□ -0.7
SMARCE1-218ENST00000582955 OR56B2PQ8NGI1 322 aa10.66□□□□□ -0.7
SMARCE1-218ENST00000582955 OR52H1Q8NGJ2 320 aa10.66□□□□□ -0.7
SMARCE1-218ENST00000582955 FAM81AQ8TBF8 368 aa10.66□□□□□ -0.7
SMARCE1-218ENST00000582955 POM121Q96HA1 1249 aa10.66□□□□□ -0.7
SMARCE1-218ENST00000582955 REEP6Q96HR9 211 aa10.66□□□□□ -0.7
SMARCE1-218ENST00000582955 MEGF10Q96KG7 1140 aa10.66□□□□□ -0.7
SMARCE1-218ENST00000582955 REPIN1Q9BWE0 567 aaKnown RBP10.66□□□□□ -0.7
SMARCE1-218ENST00000582955 OR10A2Q9H208 303 aa10.66□□□□□ -0.7
SMARCE1-218ENST00000582955 NIPAL2Q9H841 368 aa10.66□□□□□ -0.7
SMARCE1-218ENST00000582955 TMEM106BQ9NUM4 274 aa10.66□□□□□ -0.7
SMARCE1-218ENST00000582955 IMPAD1Q9NX62 359 aa10.66□□□□□ -0.7
SMARCE1-218ENST00000582955 DCAF16Q9NXF7 216 aa10.66□□□□□ -0.7
SMARCE1-218ENST00000582955 KCNS2Q9ULS6 477 aa10.66□□□□□ -0.7
SMARCE1-218ENST00000582955 NOP16Q9Y3C1 178 aaKnown RBP10.66□□□□□ -0.7
SMARCE1-218ENST00000582955 LRP12Q9Y561 859 aa10.66□□□□□ -0.7
SMARCE1-218ENST00000582955 TMEM14AQ9Y6G1 99 aa10.66□□□□□ -0.7
SMARCE1-218ENST00000582955 TANC2Q9HCD6 1990 aa10.65□□□□□ -0.7
SMARCE1-218ENST00000582955 LMX1BO60663 402 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms