RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 TTC33Q6PID6 262 aaPredicted RBP4.82□□□□□ -1.64
SMG6-219ENST00000575663 DHRS4L2Q6PKH6 230 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 MSANTD1Q6ZTZ1 278 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 SYT9Q86SS6 491 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 SLC30A8Q8IWU4 369 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 CELF2-AS1Q8N7Q2 184 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 PCYOX1LQ8NBM8 494 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 BEND2Q8NDZ0 799 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 C19orf18Q8NEA5 215 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 OR5L1Q8NGL2 311 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 FNDC8Q8TC99 324 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 ASB10Q8WXI3 467 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 ST8SIA4Q92187 359 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 PTP4A1Q93096 173 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 RASD2Q96D21 266 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 OR52B2Q96RD2 323 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 SEPHS2Q99611 448 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 NKX3-1Q99801 234 aaPredicted RBP4.82□□□□□ -1.64
SMG6-219ENST00000575663 SSX3Q99909 188 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 EBF4Q9BQW3 602 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 CPPED1Q9BRF8 314 aaPredicted RBP4.82□□□□□ -1.64
SMG6-219ENST00000575663 BTBD10Q9BSF8 475 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 WACQ9BTA9 647 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 DCTN5Q9BTE1 182 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 MRPL13Q9BYD1 178 aaKnown RBP4.82□□□□□ -1.64
SMG6-219ENST00000575663 POFUT1Q9H488 388 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 RAD21L1Q9H4I0 556 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 TPT1P8Q9HAU6 139 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 SMURF1Q9HCE7 757 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 BCL2L10Q9HD36 194 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 NKX1-2Q9UD57 310 aaPredicted RBP4.82□□□□□ -1.64
SMG6-219ENST00000575663 RPUSD1Q9UJJ7 312 aaKnown RBP4.82□□□□□ -1.64
SMG6-219ENST00000575663 PRPF19Q9UMS4 504 aaKnown RBP4.82□□□□□ -1.64
SMG6-219ENST00000575663 NDUFAF1Q9Y375 327 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 UGT2A1Q9Y4X1 527 aa4.82□□□□□ -1.64
SMG6-219ENST00000575663 COL7A1Q02388 2944 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 A0A1W2PPL8 197 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 A0A1W2PRD5 423 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 A0A1W2PRF3 423 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 A0A1W2PRM7 423 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 A0A1W2PRX2 142 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 OOEPA6NGQ2 149 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 ADARB2-AS1A8MUL3 147 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 KPNA4O00629 521 aaPredicted RBP4.81□□□□□ -1.64
SMG6-219ENST00000575663 DVL1O14640 695 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 GYG2O15488 501 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 MLNRO43193 412 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 SGCEO43556 437 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 SLC22A3O75751 556 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 ALDOBP05062 364 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 IL6P05231 212 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 ZCCHC18P0CG32 403 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 LYL1P12980 280 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 COX4I1P13073 169 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 ZNF26P17031 533 aaPredicted RBP4.81□□□□□ -1.64
SMG6-219ENST00000575663 MSR1P21757 451 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 HOXD3P31249 432 aaPredicted RBP4.81□□□□□ -1.64
SMG6-219ENST00000575663 ERFP50548 548 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 RAD23AP54725 363 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 NME5P56597 212 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 FMODQ06828 376 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 TRAP1Q12931 704 aaKnown RBP4.81□□□□□ -1.64
SMG6-219ENST00000575663 FADDQ13158 208 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 RIPK1Q13546 671 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 SNCBQ16143 134 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 AANATQ16613 207 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 NCR3LG1Q68D85 454 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 SFRP4Q6FHJ7 346 aaPredicted RBP4.81□□□□□ -1.64
SMG6-219ENST00000575663 OR2T2Q6IF00 324 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 ZNF613Q6PF04 617 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 BLOC1S3Q6QNY0 202 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 C16orf89Q6UX73 402 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 FBXW12Q6X9E4 464 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 ARPINQ7Z6K5 226 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 DPP10Q8N608 796 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 ZBTB8BQ8NAP8 495 aaPredicted RBP4.81□□□□□ -1.64
SMG6-219ENST00000575663 BHLHE23Q8NDY6 225 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 SDR9C7Q8NEX9 313 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 SLC7A6OSQ96CW6 309 aaPredicted RBP4.81□□□□□ -1.64
SMG6-219ENST00000575663 DMRTB1Q96MA1 342 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 HOPXQ9BPY8 73 aaPredicted RBP4.81□□□□□ -1.64
SMG6-219ENST00000575663 ECSITQ9BQ95 431 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 CHID1Q9BWS9 393 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 WDR55Q9H6Y2 383 aaPredicted RBP4.81□□□□□ -1.64
SMG6-219ENST00000575663 RMND5AQ9H871 391 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 INIPQ9NRY2 104 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 UFSP2Q9NUQ7 469 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 TMEM100Q9NV29 134 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 AIG1Q9NVV5 245 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 GID8Q9NWU2 228 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 PPP1R14DQ9NXH3 145 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 TAS2R1Q9NYW7 299 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 PTTG3PQ9NZH4 202 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 RNF7Q9UBF6 113 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 DNAJB11Q9UBS4 358 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 LAMP5Q9UJQ1 280 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 ANGPT4Q9Y264 503 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 STARD10Q9Y365 291 aa4.81□□□□□ -1.64
SMG6-219ENST00000575663 NOP16Q9Y3C1 178 aaKnown RBP4.81□□□□□ -1.64
SMG6-219ENST00000575663 HUWE1Q7Z6Z7 4374 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms