RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 N6AMT1Q9Y5N5 214 aa23.46■■□□□ 1.35
SCARF1-207ENST00000573867 CDH15P55291 814 aa23.45■■□□□ 1.34
SCARF1-207ENST00000573867 MRPL21Q7Z2W9 205 aaKnown RBP23.45■■□□□ 1.34
SCARF1-207ENST00000573867 PRIMA1Q86XR5 153 aa23.45■■□□□ 1.34
SCARF1-207ENST00000573867 OR13G1Q8NGZ3 307 aa23.45■■□□□ 1.34
SCARF1-207ENST00000573867 THEM6Q8WUY1 208 aa23.45■■□□□ 1.34
SCARF1-207ENST00000573867 REPIN1Q9BWE0 567 aaKnown RBP23.45■■□□□ 1.34
SCARF1-207ENST00000573867 GABARAPL3Q9BY60 117 aa23.45■■□□□ 1.34
SCARF1-207ENST00000573867 ZNF319Q9P2F9 582 aa23.45■■□□□ 1.34
SCARF1-207ENST00000573867 FAM157AC9JC47 383 aa23.44■■□□□ 1.34
SCARF1-207ENST00000573867 LMX1BO60663 402 aa23.44■■□□□ 1.34
SCARF1-207ENST00000573867 TGFAP01135 160 aa23.44■■□□□ 1.34
SCARF1-207ENST00000573867 HLA-DPB1P04440 258 aa23.44■■□□□ 1.34
SCARF1-207ENST00000573867 LYNP07948 512 aa23.44■■□□□ 1.34
SCARF1-207ENST00000573867 MRPL3P09001 348 aaKnown RBP23.44■■□□□ 1.34
SCARF1-207ENST00000573867 SELEP16581 610 aa23.44■■□□□ 1.34
SCARF1-207ENST00000573867 TNFSF4P23510 183 aa23.44■■□□□ 1.34
SCARF1-207ENST00000573867 SLC15A1P46059 708 aa23.44■■□□□ 1.34
SCARF1-207ENST00000573867 AADACL4Q5VUY2 407 aa23.44■■□□□ 1.34
SCARF1-207ENST00000573867 FAM166AQ6J272 317 aa23.44■■□□□ 1.34
SCARF1-207ENST00000573867 ZFP1Q6P2D0 407 aa23.44■■□□□ 1.34
SCARF1-207ENST00000573867 TMEM163Q8TC26 289 aa23.44■■□□□ 1.34
SCARF1-207ENST00000573867 MEGF10Q96KG7 1140 aa23.44■■□□□ 1.34
SCARF1-207ENST00000573867 IL4I1Q96RQ9 567 aa23.44■■□□□ 1.34
SCARF1-207ENST00000573867 TOR3AQ9H497 397 aa23.44■■□□□ 1.34
SCARF1-207ENST00000573867 DNAJC27Q9NZQ0 273 aa23.44■■□□□ 1.34
SCARF1-207ENST00000573867 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP23.43■■□□□ 1.34
SCARF1-207ENST00000573867 IGHV3-64DA0A0J9YX35 117 aa23.43■■□□□ 1.34
SCARF1-207ENST00000573867 CD300LBA8K4G0 201 aa23.43■■□□□ 1.34
SCARF1-207ENST00000573867 PRR32B1ATL7 298 aa23.43■■□□□ 1.34
SCARF1-207ENST00000573867 F5H5P2 479 aa23.43■■□□□ 1.34
SCARF1-207ENST00000573867 ALOX5APP20292 161 aa23.43■■□□□ 1.34
SCARF1-207ENST00000573867 HSD11B1P28845 292 aa23.43■■□□□ 1.34
SCARF1-207ENST00000573867 ZNF121P58317 390 aaPredicted RBP23.43■■□□□ 1.34
SCARF1-207ENST00000573867 SLC16A9Q7RTY1 509 aa23.43■■□□□ 1.34
SCARF1-207ENST00000573867 ZNF454Q8N9F8 522 aa23.43■■□□□ 1.34
SCARF1-207ENST00000573867 RIBC2Q9H4K1 309 aa23.43■■□□□ 1.34
SCARF1-207ENST00000573867 CUBNO60494 3623 aa23.43■■□□□ 1.34
SCARF1-207ENST00000573867 ANXA2P07355 339 aaKnown RBP23.42■■□□□ 1.34
SCARF1-207ENST00000573867 H2BFMP0C1H6 154 aa23.42■■□□□ 1.34
SCARF1-207ENST00000573867 LRRN1Q6UXK5 716 aa23.42■■□□□ 1.34
SCARF1-207ENST00000573867 RHOUQ7L0Q8 258 aa23.42■■□□□ 1.34
SCARF1-207ENST00000573867 LINC01356Q8N9X3 169 aa23.42■■□□□ 1.34
SCARF1-207ENST00000573867 SPSB4Q96A44 273 aa23.42■■□□□ 1.34
SCARF1-207ENST00000573867 SIGLEC11Q96RL6 698 aa23.42■■□□□ 1.34
SCARF1-207ENST00000573867 RBM4BQ9BQ04 359 aaKnown RBP23.42■■□□□ 1.34
SCARF1-207ENST00000573867 PRRG3Q9BZD7 231 aa23.42■■□□□ 1.34
SCARF1-207ENST00000573867 GCM1Q9NP62 436 aa23.42■■□□□ 1.34
SCARF1-207ENST00000573867 TMEM106BQ9NUM4 274 aa23.42■■□□□ 1.34
SCARF1-207ENST00000573867 TMEM100Q9NV29 134 aa23.42■■□□□ 1.34
SCARF1-207ENST00000573867 KCNS2Q9ULS6 477 aa23.42■■□□□ 1.34
SCARF1-207ENST00000573867 COPS3Q9UNS2 423 aa23.42■■□□□ 1.34
SCARF1-207ENST00000573867 EI24O14681 340 aa23.41■■□□□ 1.34
SCARF1-207ENST00000573867 ALPLP05186 524 aa23.41■■□□□ 1.34
SCARF1-207ENST00000573867 TNFRSF1AP19438 455 aa23.41■■□□□ 1.34
SCARF1-207ENST00000573867 KRTAP21-3Q3LHN1 58 aa23.41■■□□□ 1.34
SCARF1-207ENST00000573867 FAM57BQ71RH2 274 aa23.41■■□□□ 1.34
SCARF1-207ENST00000573867 RFLNBQ8N5W9 214 aa23.41■■□□□ 1.34
SCARF1-207ENST00000573867 YIPF3Q9GZM5 350 aa23.41■■□□□ 1.34
SCARF1-207ENST00000573867 TMEM160Q9NX00 188 aa23.41■■□□□ 1.34
SCARF1-207ENST00000573867 ENOPH1Q9UHY7 261 aa23.41■■□□□ 1.34
SCARF1-207ENST00000573867 PPP1R3CQ9UQK1 317 aa23.41■■□□□ 1.34
SCARF1-207ENST00000573867 TBX1O43435 398 aa23.4■■□□□ 1.34
SCARF1-207ENST00000573867 MMP16P51512 607 aa23.4■■□□□ 1.34
SCARF1-207ENST00000573867 NXNL2Q5VZ03 156 aa23.4■■□□□ 1.34
SCARF1-207ENST00000573867 MEPCEQ7L2J0 689 aaKnown RBP23.4■■□□□ 1.34
SCARF1-207ENST00000573867 OR56B2PQ8NGI1 322 aa23.4■■□□□ 1.34
SCARF1-207ENST00000573867 ZNF420Q8TAQ5 688 aaPredicted RBP23.4■■□□□ 1.34
SCARF1-207ENST00000573867 SPRYD4Q8WW59 207 aaPredicted RBP23.4■■□□□ 1.34
SCARF1-207ENST00000573867 RAB1CQ92928 201 aa23.4■■□□□ 1.34
SCARF1-207ENST00000573867 SGK3Q96BR1 496 aa23.4■■□□□ 1.34
SCARF1-207ENST00000573867 ZNF665Q9H7R5 613 aa23.4■■□□□ 1.34
SCARF1-207ENST00000573867 S100A14Q9HCY8 104 aa23.4■■□□□ 1.34
SCARF1-207ENST00000573867 BRD7Q9NPI1 651 aa23.4■■□□□ 1.34
SCARF1-207ENST00000573867 USE1Q9NZ43 259 aa23.4■■□□□ 1.34
SCARF1-207ENST00000573867 DYSFO75923 2080 aa23.39■■□□□ 1.34
SCARF1-207ENST00000573867 IGHV2-70P01814 119 aa23.39■■□□□ 1.33
SCARF1-207ENST00000573867 CA6P23280 308 aa23.39■■□□□ 1.33
SCARF1-207ENST00000573867 PMELP40967 661 aa23.39■■□□□ 1.33
SCARF1-207ENST00000573867 SLC3A1Q07837 685 aa23.39■■□□□ 1.33
SCARF1-207ENST00000573867 MAB21L1Q13394 359 aa23.39■■□□□ 1.33
SCARF1-207ENST00000573867 LCN1P1Q5VSP4 162 aa23.39■■□□□ 1.33
SCARF1-207ENST00000573867 IL17RELQ6ZVW7 336 aa23.39■■□□□ 1.33
SCARF1-207ENST00000573867 ZNF771Q7L3S4 317 aaPredicted RBP23.39■■□□□ 1.33
SCARF1-207ENST00000573867 DVL3Q92997 716 aaPredicted RBP23.39■■□□□ 1.33
SCARF1-207ENST00000573867 TIMD4Q96H15 378 aa23.39■■□□□ 1.33
SCARF1-207ENST00000573867 LPAR2Q9HBW0 351 aa23.39■■□□□ 1.33
SCARF1-207ENST00000573867 LAMP5Q9UJQ1 280 aa23.39■■□□□ 1.33
SCARF1-207ENST00000573867 LRP12Q9Y561 859 aa23.39■■□□□ 1.33
SCARF1-207ENST00000573867 NPTNQ9Y639 398 aa23.39■■□□□ 1.33
SCARF1-207ENST00000573867 JMJD1CQ15652 2540 aa23.39■■□□□ 1.33
SCARF1-207ENST00000573867 GGT3PA6NGU5 568 aa23.38■■□□□ 1.33
SCARF1-207ENST00000573867 PSMD9O00233 223 aa23.38■■□□□ 1.33
SCARF1-207ENST00000573867 XRCC2O43543 280 aa23.38■■□□□ 1.33
SCARF1-207ENST00000573867 IGHV2-5P01817 119 aa23.38■■□□□ 1.33
SCARF1-207ENST00000573867 FAM3AP98173 230 aa23.38■■□□□ 1.33
SCARF1-207ENST00000573867 REEP6Q96HR9 211 aa23.38■■□□□ 1.33
SCARF1-207ENST00000573867 RAB3IPQ96QF0 476 aaPredicted RBP23.38■■□□□ 1.33
SCARF1-207ENST00000573867 TTTY10Q9BZA0 68 aa23.38■■□□□ 1.33
SCARF1-207ENST00000573867 E9PQ18 207 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms