RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 ATG16L2Q8NAA4 619 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 OR10AD1Q8NGE0 317 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 OR6K6Q8NGW6 343 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 OR2AE1Q8NHA4 323 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 OTOSQ8NHW6 89 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 SLAMF6Q96DU3 332 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 ZMYND19Q96E35 227 aaPredicted RBP7.33□□□□□ -1.24
SMG6-210ENST00000572205 ZNF799Q96GE5 643 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 CENPNQ96H22 339 aaPredicted RBP7.33□□□□□ -1.24
SMG6-210ENST00000572205 ABHD6Q9BV23 337 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 OSBPL10Q9BXB5 764 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 FGF23Q9GZV9 251 aaPredicted RBP7.33□□□□□ -1.24
SMG6-210ENST00000572205 SEMA6AQ9H2E6 1030 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 YY1AP1Q9H869 796 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 TUBG2Q9NRH3 451 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 TMEM160Q9NX00 188 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 POLR1DQ9Y2S0 133 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 GRIP1Q9Y3R0 1128 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 DOCK11Q5JSL3 2073 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 ELOA3CA0A087WX78 387 aaPredicted RBP7.32□□□□□ -1.24
SMG6-210ENST00000572205 IGHV1-69-2A0A0G2JMI3 117 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 LOC100289279A0A1B0GTE1 492 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 hCG_38984A0A1B0GV85 526 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 ZNF593O00488 134 aaPredicted RBP7.32□□□□□ -1.24
SMG6-210ENST00000572205 DLGAP1O14490 977 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 GNGT2O14610 69 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 SPRY3O43610 288 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 TLX2O43763 284 aaPredicted RBP7.32□□□□□ -1.24
SMG6-210ENST00000572205 FCN3O75636 299 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 SCGB1D2O95969 90 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 IFNGP01579 166 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 SLC2A1P11166 492 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 ALOX5APP20292 161 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 FASP25445 335 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 POU1F1P28069 291 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 FMO3P31513 532 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 PMELP40967 661 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 GUCA1AP43080 201 aaPredicted RBP7.32□□□□□ -1.24
SMG6-210ENST00000572205 CENPAP49450 140 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 SUMO1P63165 101 aaKnown RBP7.32□□□□□ -1.24
SMG6-210ENST00000572205 ECH1Q13011 328 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 MAB21L1Q13394 359 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 TSTQ16762 297 aaKnown RBP7.32□□□□□ -1.24
SMG6-210ENST00000572205 ZBTB37Q5TC79 503 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 DRAM2Q6UX65 266 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 RHOUQ7L0Q8 258 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 CXXC5Q7LFL8 322 aaKnown RBP7.32□□□□□ -1.24
SMG6-210ENST00000572205 KRT74Q7RTS7 529 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 WDR86Q86TI4 376 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 HIPK1Q86Z02 1210 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 ERI1Q8IV48 349 aaKnown RBP7.32□□□□□ -1.24
SMG6-210ENST00000572205 OR8G5Q8NG78 346 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 OR6N2Q8NGY6 317 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 DACT3Q96B18 629 aaPredicted RBP7.32□□□□□ -1.24
SMG6-210ENST00000572205 INTS14Q96SY0 518 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 MBOAT4Q96T53 435 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 PITX2Q99697 317 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 PPP1R3EQ9H7J1 279 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 SAP30LQ9HAJ7 183 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 ADGRL4Q9HBW9 690 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 KRT84Q9NSB2 600 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 USE1Q9NZ43 259 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 EIF3KQ9UBQ5 218 aaKnown RBP7.32□□□□□ -1.24
SMG6-210ENST00000572205 WIPI2Q9Y4P8 454 aa7.32□□□□□ -1.24
SMG6-210ENST00000572205 SAC3D1A6NKF1 404 aa7.31□□□□□ -1.24
SMG6-210ENST00000572205 KIAA1324LA8MWY0 1029 aaPredicted RBP7.31□□□□□ -1.24
SMG6-210ENST00000572205 PRR23D1E9PI22 279 aaPredicted RBP7.31□□□□□ -1.24
SMG6-210ENST00000572205 F5H0A9 414 aaPredicted RBP7.31□□□□□ -1.24
SMG6-210ENST00000572205 F5H5K5 113 aa7.31□□□□□ -1.24
SMG6-210ENST00000572205 G3V2T6 193 aa7.31□□□□□ -1.24
SMG6-210ENST00000572205 EI24O14681 340 aa7.31□□□□□ -1.24
SMG6-210ENST00000572205 RGS13O14921 159 aa7.31□□□□□ -1.24
SMG6-210ENST00000572205 TIMM8AO60220 97 aaPredicted RBP7.31□□□□□ -1.24
SMG6-210ENST00000572205 CDC14BO60729 498 aa7.31□□□□□ -1.24
SMG6-210ENST00000572205 IGHV2-5P01817 119 aa7.31□□□□□ -1.24
SMG6-210ENST00000572205 HLA-DQA2P01906 255 aa7.31□□□□□ -1.24
SMG6-210ENST00000572205 PRR23D2P0DMB1 279 aaPredicted RBP7.31□□□□□ -1.24
SMG6-210ENST00000572205 FCGR1AP12314 374 aa7.31□□□□□ -1.24
SMG6-210ENST00000572205 GABRB1P18505 474 aa7.31□□□□□ -1.24
SMG6-210ENST00000572205 ACKR3P25106 362 aa7.31□□□□□ -1.24
SMG6-210ENST00000572205 GCH1P30793 250 aa7.31□□□□□ -1.24
SMG6-210ENST00000572205 GNALP38405 381 aa7.31□□□□□ -1.24
SMG6-210ENST00000572205 NAA10P41227 235 aaPredicted RBP7.31□□□□□ -1.24
SMG6-210ENST00000572205 GATA4P43694 442 aa7.31□□□□□ -1.24
SMG6-210ENST00000572205 ARHGDIAP52565 204 aa7.31□□□□□ -1.24
SMG6-210ENST00000572205 HCCSP53701 268 aa7.31□□□□□ -1.24
SMG6-210ENST00000572205 APOFQ13790 326 aa7.31□□□□□ -1.24
SMG6-210ENST00000572205 OR8B8Q15620 311 aa7.31□□□□□ -1.24
SMG6-210ENST00000572205 CARTPTQ16568 116 aa7.31□□□□□ -1.24
SMG6-210ENST00000572205 SLC35D3Q5M8T2 416 aa7.31□□□□□ -1.24
SMG6-210ENST00000572205 AVPI1Q5T686 147 aa7.31□□□□□ -1.24
SMG6-210ENST00000572205 C1orf229Q6ZS94 237 aaPredicted RBP7.31□□□□□ -1.24
SMG6-210ENST00000572205 SSX6Q7RTT6 188 aa7.31□□□□□ -1.24
SMG6-210ENST00000572205 OR5AS1Q8N127 324 aa7.31□□□□□ -1.24
SMG6-210ENST00000572205 TMEM163Q8TC26 289 aa7.31□□□□□ -1.24
SMG6-210ENST00000572205 SNX33Q8WV41 574 aa7.31□□□□□ -1.24
SMG6-210ENST00000572205 ITLN1Q8WWA0 313 aa7.31□□□□□ -1.24
SMG6-210ENST00000572205 PPP1R14AQ96A00 147 aa7.31□□□□□ -1.24
SMG6-210ENST00000572205 ELMOD3Q96FG2 381 aa7.31□□□□□ -1.24
SMG6-210ENST00000572205 MEGF10Q96KG7 1140 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms