RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 IFNGR2P38484 337 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 OR1E2P47887 323 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 GSSP48637 474 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 CCT3P49368 545 aaKnown RBP3.01□□□□□ -1.93
UBR1-211ENST00000569971 CRISP1P54107 249 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 CRISP3P54108 245 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 HILS1P60008 231 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 VBP1P61758 197 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 STXBP1P61764 594 aaKnown RBP3.01□□□□□ -1.93
UBR1-211ENST00000569971 LSM3P62310 102 aaKnown RBP3.01□□□□□ -1.93
UBR1-211ENST00000569971 CSNK1G2P78368 415 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 ZNF85Q03923 595 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 PRDX1Q06830 199 aaKnown RBP3.01□□□□□ -1.93
UBR1-211ENST00000569971 COX10Q12887 443 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 KRR1Q13601 381 aaKnown RBP3.01□□□□□ -1.93
UBR1-211ENST00000569971 C1DQ13901 141 aaKnown RBP3.01□□□□□ -1.93
UBR1-211ENST00000569971 LY6DQ14210 128 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 GANABQ14697 944 aaKnown RBP3.01□□□□□ -1.93
UBR1-211ENST00000569971 PTGES3Q15185 160 aaKnown RBP3.01□□□□□ -1.93
UBR1-211ENST00000569971 NDUFA9Q16795 377 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 PIP5KL1Q5T9C9 394 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 MEDAGQ5VYS4 303 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 SAXO2Q658L1 398 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 VITQ6UXI7 678 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 C6orf120Q7Z4R8 191 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 VASH2Q86V25 355 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 C2orf73Q8N5S3 287 aaPredicted RBP3.01□□□□□ -1.93
UBR1-211ENST00000569971 ZNF491Q8N8L2 437 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 Q8NBF4 154 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 OR6Q1Q8NGQ2 317 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 OR9Q1Q8NGQ5 310 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 OR2L8Q8NGY9 312 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 MCFD2Q8NI22 146 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 NDNFQ8TB73 568 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 DYNC2LI1Q8TCX1 351 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 SFXN5Q8TD22 340 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 ZNF675Q8TD23 568 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 FGF13Q92913 245 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 EXOSC8Q96B26 276 aaKnown RBP3.01□□□□□ -1.93
UBR1-211ENST00000569971 UPRTQ96BW1 309 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 TM4SF18Q96CE8 201 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 DNAJA3Q96EY1 480 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 WBP1Q96G27 269 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 SH3YL1Q96HL8 342 aaPredicted RBP3.01□□□□□ -1.93
UBR1-211ENST00000569971 C12orf66Q96MD2 445 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 PRAP1Q96NZ9 151 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 DPH7Q9BTV6 452 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 RPP25Q9BUL9 199 aaKnown RBP3.01□□□□□ -1.93
UBR1-211ENST00000569971 PRRG3Q9BZD7 231 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 UCK2Q9BZX2 261 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 ROGDIQ9GZN7 287 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 DCSTAMPQ9H295 470 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 SPNS1Q9H2V7 528 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 SP140LQ9H930 580 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 NMNAT1Q9HAN9 279 aaPredicted RBP3.01□□□□□ -1.93
UBR1-211ENST00000569971 MRPS30Q9NP92 439 aaKnown RBP3.01□□□□□ -1.93
UBR1-211ENST00000569971 ESM1Q9NQ30 184 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 FBXO8Q9NRD0 319 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 ACER3Q9NUN7 267 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 IMP3Q9NV31 184 aaKnown RBP3.01□□□□□ -1.93
UBR1-211ENST00000569971 FKBP14Q9NWM8 211 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 GIN1Q9NXP7 522 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 TAS2R7Q9NYW3 318 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 CALML5Q9NZT1 146 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 CCDC59Q9P031 241 aaKnown RBP3.01□□□□□ -1.93
UBR1-211ENST00000569971 SLC23A2Q9UGH3 650 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 ZNF780BQ9Y6R6 833 aa3.01□□□□□ -1.93
UBR1-211ENST00000569971 MUC22E2RYF6 1773 aaPredicted RBP3.01□□□□□ -1.93
UBR1-211ENST00000569971 UTRNP46939 3433 aa3□□□□□ -1.93
UBR1-211ENST00000569971 KIAA1549LQ6ZVL6 1849 aa3□□□□□ -1.93
UBR1-211ENST00000569971 DNAH12Q6ZR08 3092 aa3□□□□□ -1.93
UBR1-211ENST00000569971 A0A0A6YYD5 115 aa3□□□□□ -1.93
UBR1-211ENST00000569971 LOC100506127A0A0U1RQW1 187 aa3□□□□□ -1.93
UBR1-211ENST00000569971 ISPDA4D126 451 aa3□□□□□ -1.93
UBR1-211ENST00000569971 GSAPA4D1B5 854 aa3□□□□□ -1.93
UBR1-211ENST00000569971 RPL37AP8A6NKH3 93 aa3□□□□□ -1.93
UBR1-211ENST00000569971 PPIAL4DF5H284 164 aa3□□□□□ -1.93
UBR1-211ENST00000569971 H3BN98 237 aa3□□□□□ -1.93
UBR1-211ENST00000569971 TMX2-CTNND1H3BSU7 103 aa3□□□□□ -1.93
UBR1-211ENST00000569971 HMGN4O00479 90 aa3□□□□□ -1.93
UBR1-211ENST00000569971 NTN3O00634 580 aaPredicted RBP3□□□□□ -1.93
UBR1-211ENST00000569971 SOCS3O14543 225 aa3□□□□□ -1.93
UBR1-211ENST00000569971 CASC3O15234 703 aaKnown RBP3□□□□□ -1.93
UBR1-211ENST00000569971 ZW10O43264 779 aa3□□□□□ -1.93
UBR1-211ENST00000569971 EMC8O43402 210 aa3□□□□□ -1.93
UBR1-211ENST00000569971 DUX1O43812 170 aa3□□□□□ -1.93
UBR1-211ENST00000569971 OR10H3O60404 316 aa3□□□□□ -1.93
UBR1-211ENST00000569971 IGHG3P01860 377 aa3□□□□□ -1.93
UBR1-211ENST00000569971 STSP08842 583 aa3□□□□□ -1.93
UBR1-211ENST00000569971 DBTP11182 482 aaKnown RBP3□□□□□ -1.93
UBR1-211ENST00000569971 POU2F1P14859 743 aa3□□□□□ -1.93
UBR1-211ENST00000569971 MYL12AP19105 171 aa3□□□□□ -1.93
UBR1-211ENST00000569971 CSNK2A2P19784 350 aaPredicted RBP3□□□□□ -1.93
UBR1-211ENST00000569971 GADD45AP24522 165 aa3□□□□□ -1.93
UBR1-211ENST00000569971 PSMB5P28074 263 aa3□□□□□ -1.93
UBR1-211ENST00000569971 CD40LGP29965 261 aa3□□□□□ -1.93
UBR1-211ENST00000569971 GDI1P31150 447 aa3□□□□□ -1.93
UBR1-211ENST00000569971 MPIP34949 423 aa3□□□□□ -1.93
UBR1-211ENST00000569971 DRD3P35462 400 aa3□□□□□ -1.93
UBR1-211ENST00000569971 TGFBR2P37173 567 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms