RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 U3KQV3 271 aa11.57□□□□□ -0.56
GTF3C1-211ENST00000569653 MDFIC2A0A1B0GVS7 189 aa11.56□□□□□ -0.56
GTF3C1-211ENST00000569653 TVP23AA6NH52 213 aa11.56□□□□□ -0.56
GTF3C1-211ENST00000569653 F5H5K5 113 aa11.56□□□□□ -0.56
GTF3C1-211ENST00000569653 BHLHE40O14503 412 aa11.56□□□□□ -0.56
GTF3C1-211ENST00000569653 IDH3BO43837 385 aa11.56□□□□□ -0.56
GTF3C1-211ENST00000569653 FCN3O75636 299 aa11.56□□□□□ -0.56
GTF3C1-211ENST00000569653 RENP00797 406 aa11.56□□□□□ -0.56
GTF3C1-211ENST00000569653 CST1P01037 141 aa11.56□□□□□ -0.56
GTF3C1-211ENST00000569653 PPP1R8Q12972 351 aaKnown RBP11.56□□□□□ -0.56
GTF3C1-211ENST00000569653 MPPED2Q15777 294 aa11.56□□□□□ -0.56
GTF3C1-211ENST00000569653 MICAQ29983 383 aa11.56□□□□□ -0.56
GTF3C1-211ENST00000569653 SNAI3Q3KNW1 292 aa11.56□□□□□ -0.56
GTF3C1-211ENST00000569653 ZNF404Q494X3 552 aa11.56□□□□□ -0.56
GTF3C1-211ENST00000569653 ARMCX4Q5H9R4 360 aa11.56□□□□□ -0.56
GTF3C1-211ENST00000569653 PRAMEF6Q5VXH4 476 aa11.56□□□□□ -0.56
GTF3C1-211ENST00000569653 CCDC121Q6ZUS5 278 aa11.56□□□□□ -0.56
GTF3C1-211ENST00000569653 SPATA24Q86W54 205 aa11.56□□□□□ -0.56
GTF3C1-211ENST00000569653 AQP11Q8NBQ7 271 aa11.56□□□□□ -0.56
GTF3C1-211ENST00000569653 OR52E2Q8NGJ4 325 aa11.56□□□□□ -0.56
GTF3C1-211ENST00000569653 CANT1Q8WVQ1 401 aa11.56□□□□□ -0.56
GTF3C1-211ENST00000569653 ZNF582Q96NG8 517 aaPredicted RBP11.56□□□□□ -0.56
GTF3C1-211ENST00000569653 PITX2Q99697 317 aa11.56□□□□□ -0.56
GTF3C1-211ENST00000569653 ATF6BQ99941 703 aa11.56□□□□□ -0.56
GTF3C1-211ENST00000569653 CHID1Q9BWS9 393 aa11.56□□□□□ -0.56
GTF3C1-211ENST00000569653 CDADC1Q9BWV3 514 aa11.56□□□□□ -0.56
GTF3C1-211ENST00000569653 YY1AP1Q9H869 796 aa11.56□□□□□ -0.56
GTF3C1-211ENST00000569653 NUP50Q9UKX7 468 aa11.56□□□□□ -0.56
GTF3C1-211ENST00000569653 IGHV2-70DA0A0C4DH43 119 aa11.55□□□□□ -0.56
GTF3C1-211ENST00000569653 SURF4O15260 269 aa11.55□□□□□ -0.56
GTF3C1-211ENST00000569653 FAM20BO75063 409 aa11.55□□□□□ -0.56
GTF3C1-211ENST00000569653 RPS2P15880 293 aaKnown RBP11.55□□□□□ -0.56
GTF3C1-211ENST00000569653 GATA4P43694 442 aa11.55□□□□□ -0.56
GTF3C1-211ENST00000569653 ZNF181Q2M3W8 571 aa11.55□□□□□ -0.56
GTF3C1-211ENST00000569653 ESCO2Q56NI9 601 aa11.55□□□□□ -0.56
GTF3C1-211ENST00000569653 ZNF841Q6ZN19 808 aa11.55□□□□□ -0.56
GTF3C1-211ENST00000569653 RASSF6Q6ZTQ3 369 aa11.55□□□□□ -0.56
GTF3C1-211ENST00000569653 C3orf56Q8N813 242 aa11.55□□□□□ -0.56
GTF3C1-211ENST00000569653 OR51L1Q8NGJ5 315 aa11.55□□□□□ -0.56
GTF3C1-211ENST00000569653 OR5L1Q8NGL2 311 aa11.55□□□□□ -0.56
GTF3C1-211ENST00000569653 OR4Q3Q8NH05 313 aa11.55□□□□□ -0.56
GTF3C1-211ENST00000569653 OR2AE1Q8NHA4 323 aa11.55□□□□□ -0.56
GTF3C1-211ENST00000569653 JMJD8Q96S16 334 aa11.55□□□□□ -0.56
GTF3C1-211ENST00000569653 SSBP3Q9BWW4 388 aaPredicted RBP11.55□□□□□ -0.56
GTF3C1-211ENST00000569653 DGCR6LQ9BY27 220 aa11.55□□□□□ -0.56
GTF3C1-211ENST00000569653 TBC1D23Q9NUY8 699 aa11.55□□□□□ -0.56
GTF3C1-211ENST00000569653 LRCH1Q9Y2L9 728 aa11.55□□□□□ -0.56
GTF3C1-211ENST00000569653 ARRDC5A6NEK1 342 aa11.54□□□□□ -0.56
GTF3C1-211ENST00000569653 C22orf46C9J442 243 aa11.54□□□□□ -0.56
GTF3C1-211ENST00000569653 GNGT2O14610 69 aa11.54□□□□□ -0.56
GTF3C1-211ENST00000569653 PLATP00750 562 aa11.54□□□□□ -0.56
GTF3C1-211ENST00000569653 GASTP01350 101 aa11.54□□□□□ -0.56
GTF3C1-211ENST00000569653 LCATP04180 440 aa11.54□□□□□ -0.56
GTF3C1-211ENST00000569653 HKR1P10072 659 aa11.54□□□□□ -0.56
GTF3C1-211ENST00000569653 OTX1P32242 354 aaPredicted RBP11.54□□□□□ -0.56
GTF3C1-211ENST00000569653 SRP9P49458 86 aaKnown RBP11.54□□□□□ -0.56
GTF3C1-211ENST00000569653 ZNF92Q03936 586 aa11.54□□□□□ -0.56
GTF3C1-211ENST00000569653 SLC27A4Q6P1M0 643 aa11.54□□□□□ -0.56
GTF3C1-211ENST00000569653 MUC20Q8N307 709 aaPredicted RBP11.54□□□□□ -0.56
GTF3C1-211ENST00000569653 SLC37A3Q8NCC5 494 aa11.54□□□□□ -0.56
GTF3C1-211ENST00000569653 OR10G2Q8NGC3 310 aa11.54□□□□□ -0.56
GTF3C1-211ENST00000569653 OR9Q1Q8NGQ5 310 aa11.54□□□□□ -0.56
GTF3C1-211ENST00000569653 Q8TCH9 128 aa11.54□□□□□ -0.56
GTF3C1-211ENST00000569653 SLCO4A1Q96BD0 722 aa11.54□□□□□ -0.56
GTF3C1-211ENST00000569653 UPRTQ96BW1 309 aa11.54□□□□□ -0.56
GTF3C1-211ENST00000569653 MMADHCQ9H3L0 296 aaPredicted RBP11.54□□□□□ -0.56
GTF3C1-211ENST00000569653 DDX28Q9NUL7 540 aaKnown RBP11.54□□□□□ -0.56
GTF3C1-211ENST00000569653 TMEM100Q9NV29 134 aa11.54□□□□□ -0.56
GTF3C1-211ENST00000569653 IL20Q9NYY1 176 aa11.54□□□□□ -0.56
GTF3C1-211ENST00000569653 CTSZQ9UBR2 303 aa11.54□□□□□ -0.56
GTF3C1-211ENST00000569653 OR5V1Q9UGF6 321 aa11.54□□□□□ -0.56
GTF3C1-211ENST00000569653 PCDHGB1Q9Y5G3 927 aa11.54□□□□□ -0.56
GTF3C1-211ENST00000569653 TCRBV3S1A0A5B6 114 aa11.53□□□□□ -0.56
GTF3C1-211ENST00000569653 WIPF1O43516 503 aa11.53□□□□□ -0.56
GTF3C1-211ENST00000569653 E2F6O75461 281 aa11.53□□□□□ -0.56
GTF3C1-211ENST00000569653 FSTL3O95633 263 aa11.53□□□□□ -0.56
GTF3C1-211ENST00000569653 CLUP10909 449 aa11.53□□□□□ -0.56
GTF3C1-211ENST00000569653 SLC2A1P11166 492 aa11.53□□□□□ -0.56
GTF3C1-211ENST00000569653 CA6P23280 308 aa11.53□□□□□ -0.56
GTF3C1-211ENST00000569653 PRTN3P24158 256 aa11.53□□□□□ -0.56
GTF3C1-211ENST00000569653 FPR2P25090 351 aa11.53□□□□□ -0.56
GTF3C1-211ENST00000569653 CD200P41217 278 aa11.53□□□□□ -0.56
GTF3C1-211ENST00000569653 ECH1Q13011 328 aa11.53□□□□□ -0.56
GTF3C1-211ENST00000569653 GLYATL3Q5SZD4 288 aa11.53□□□□□ -0.56
GTF3C1-211ENST00000569653 PARP8Q8N3A8 854 aa11.53□□□□□ -0.56
GTF3C1-211ENST00000569653 ZNF511Q8NB15 262 aa11.53□□□□□ -0.56
GTF3C1-211ENST00000569653 GIPC3Q8TF64 312 aa11.53□□□□□ -0.56
GTF3C1-211ENST00000569653 NEIL1Q96FI4 390 aaPredicted RBP11.53□□□□□ -0.56
GTF3C1-211ENST00000569653 MRI1Q9BV20 369 aa11.53□□□□□ -0.56
GTF3C1-211ENST00000569653 HCAR1Q9BXC0 346 aa11.53□□□□□ -0.56
GTF3C1-211ENST00000569653 NMNAT2Q9BZQ4 307 aa11.53□□□□□ -0.56
GTF3C1-211ENST00000569653 NTN4Q9HB63 628 aa11.53□□□□□ -0.56
GTF3C1-211ENST00000569653 UFSP2Q9NUQ7 469 aa11.53□□□□□ -0.56
GTF3C1-211ENST00000569653 BAIAP2Q9UQB8 552 aa11.53□□□□□ -0.56
GTF3C1-211ENST00000569653 COMMD3-BMI1R4GMX3 469 aa11.53□□□□□ -0.56
GTF3C1-211ENST00000569653 TRAV40A0A0B4J280 105 aa11.52□□□□□ -0.57
GTF3C1-211ENST00000569653 CD300LBA8K4G0 201 aa11.52□□□□□ -0.57
GTF3C1-211ENST00000569653 IFNL4K9M1U5 179 aa11.52□□□□□ -0.57
GTF3C1-211ENST00000569653 M0R135 149 aa11.52□□□□□ -0.57
GTF3C1-211ENST00000569653 TNFRSF13BO14836 293 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms