RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 KIF17Q9P2E2 1029 aa7.83□□□□□ -1.16
CAPN3-219ENST00000569136 MYEF2Q9P2K5 600 aaKnown RBP7.83□□□□□ -1.16
CAPN3-219ENST00000569136 VPS13CQ709C8 3753 aa7.83□□□□□ -1.16
CAPN3-219ENST00000569136 RAI1Q7Z5J4 1906 aaPredicted RBP7.82□□□□□ -1.16
CAPN3-219ENST00000569136 SURF4O15260 269 aa7.82□□□□□ -1.16
CAPN3-219ENST00000569136 CD5LO43866 347 aa7.82□□□□□ -1.16
CAPN3-219ENST00000569136 TIMM8AO60220 97 aaPredicted RBP7.82□□□□□ -1.16
CAPN3-219ENST00000569136 LY6HO94772 140 aa7.82□□□□□ -1.16
CAPN3-219ENST00000569136 GLCEO94923 617 aa7.82□□□□□ -1.16
CAPN3-219ENST00000569136 GPANK1O95872 356 aa7.82□□□□□ -1.16
CAPN3-219ENST00000569136 LCATP04180 440 aa7.82□□□□□ -1.16
CAPN3-219ENST00000569136 COL8A2P25067 703 aa7.82□□□□□ -1.16
CAPN3-219ENST00000569136 CRYBB2P43320 205 aa7.82□□□□□ -1.16
CAPN3-219ENST00000569136 GZMKP49863 264 aa7.82□□□□□ -1.16
CAPN3-219ENST00000569136 DAPP51397 102 aa7.82□□□□□ -1.16
CAPN3-219ENST00000569136 MMP15P51511 669 aa7.82□□□□□ -1.16
CAPN3-219ENST00000569136 ERVS71-1P61550 626 aa7.82□□□□□ -1.16
CAPN3-219ENST00000569136 SLC3A1Q07837 685 aa7.82□□□□□ -1.16
CAPN3-219ENST00000569136 RIN1Q13671 783 aa7.82□□□□□ -1.16
CAPN3-219ENST00000569136 MAD2L1BPQ15013 274 aaPredicted RBP7.82□□□□□ -1.16
CAPN3-219ENST00000569136 SNAPC1Q16533 368 aa7.82□□□□□ -1.16
CAPN3-219ENST00000569136 CR1LQ2VPA4 569 aa7.82□□□□□ -1.16
CAPN3-219ENST00000569136 SLC35D3Q5M8T2 416 aa7.82□□□□□ -1.16
CAPN3-219ENST00000569136 SPATA46Q5T0L3 261 aa7.82□□□□□ -1.16
CAPN3-219ENST00000569136 ARFGEF3Q5TH69 2177 aa7.82□□□□□ -1.16
CAPN3-219ENST00000569136 DRAM2Q6UX65 266 aa7.82□□□□□ -1.16
CAPN3-219ENST00000569136 FBXW12Q6X9E4 464 aa7.82□□□□□ -1.16
CAPN3-219ENST00000569136 HS3ST5Q8IZT8 346 aa7.82□□□□□ -1.16
CAPN3-219ENST00000569136 OR51L1Q8NGJ5 315 aa7.82□□□□□ -1.16
CAPN3-219ENST00000569136 OR13G1Q8NGZ3 307 aa7.82□□□□□ -1.16
CAPN3-219ENST00000569136 OTULINQ96BN8 352 aa7.82□□□□□ -1.16
CAPN3-219ENST00000569136 ZNF582Q96NG8 517 aaPredicted RBP7.82□□□□□ -1.16
CAPN3-219ENST00000569136 RAB3IPQ96QF0 476 aaPredicted RBP7.82□□□□□ -1.16
CAPN3-219ENST00000569136 SMR3AQ99954 134 aa7.82□□□□□ -1.16
CAPN3-219ENST00000569136 HCAR1Q9BXC0 346 aa7.82□□□□□ -1.16
CAPN3-219ENST00000569136 OR51V1Q9H2C8 321 aa7.82□□□□□ -1.16
CAPN3-219ENST00000569136 TPK1Q9H3S4 243 aa7.82□□□□□ -1.16
CAPN3-219ENST00000569136 FN3KQ9H479 309 aa7.82□□□□□ -1.16
CAPN3-219ENST00000569136 TOR3AQ9H497 397 aa7.82□□□□□ -1.16
CAPN3-219ENST00000569136 SLC25A19Q9HC21 320 aa7.82□□□□□ -1.16
CAPN3-219ENST00000569136 SMURF1Q9HCE7 757 aa7.82□□□□□ -1.16
CAPN3-219ENST00000569136 DDX28Q9NUL7 540 aaKnown RBP7.82□□□□□ -1.16
CAPN3-219ENST00000569136 H2AFY2Q9P0M6 372 aaPredicted RBP7.82□□□□□ -1.16
CAPN3-219ENST00000569136 PURGQ9UJV8 347 aaKnown RBP7.82□□□□□ -1.16
CAPN3-219ENST00000569136 SONP18583 2426 aaKnown RBP7.82□□□□□ -1.16
CAPN3-219ENST00000569136 ZANQ9Y493 2812 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 ZNF469Q96JG9 3925 aaPredicted RBP7.81□□□□□ -1.16
CAPN3-219ENST00000569136 TVP23AA6NH52 213 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 IFNL4K9M1U5 179 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 TPD52L2O43399 206 aaKnown RBP7.81□□□□□ -1.16
CAPN3-219ENST00000569136 PLA2G1BP04054 148 aaKnown RBP7.81□□□□□ -1.16
CAPN3-219ENST00000569136 CD55P08174 381 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 TACSTD2P09758 323 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 ACSM4P0C7M7 580 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 FAHP16930 419 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 ZNF23P17027 643 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 TNFRSF1AP19438 455 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 MPV17P39210 176 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 ERFP50548 548 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 CHN2P52757 468 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 GRB2P62993 217 aaKnown RBP7.81□□□□□ -1.16
CAPN3-219ENST00000569136 CCL8P80075 99 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 PPP2R2BQ00005 443 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 PTGES3Q15185 160 aaKnown RBP7.81□□□□□ -1.16
CAPN3-219ENST00000569136 TMEM249Q2WGJ8 235 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 HFEQ30201 348 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 LINC01590Q5TEZ4 76 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 KDM4DQ6B0I6 523 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 PLBD1Q6P4A8 553 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 CFAP77Q6ZQR2 320 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 RFPL4BQ6ZWI9 263 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 DCXRQ7Z4W1 244 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 AMIGO2Q86SJ2 522 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 CPOQ8IVL8 374 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 LINC00346Q8IVM7 164 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 IQCF1Q8N6M8 205 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 OR9Q1Q8NGQ5 310 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 OR6K6Q8NGW6 343 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 LRTOMTQ8WZ04 291 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 SLC7A6Q92536 515 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 ITFG2Q969R8 447 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 ELMOD3Q96FG2 381 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 TIMD4Q96H15 378 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 INTS14Q96SY0 518 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 RBM4BQ9BQ04 359 aaKnown RBP7.81□□□□□ -1.16
CAPN3-219ENST00000569136 SLC22A4Q9H015 551 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 WDR76Q9H967 626 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 MARCH7Q9H992 704 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 PNRC2Q9NPJ4 139 aaKnown RBP7.81□□□□□ -1.16
CAPN3-219ENST00000569136 KRT84Q9NSB2 600 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 CENPMQ9NSP4 180 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 TMEM100Q9NV29 134 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 TVP23BQ9NYZ1 205 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 NOP16Q9Y3C1 178 aaKnown RBP7.81□□□□□ -1.16
CAPN3-219ENST00000569136 ABCA2Q9BZC7 2435 aa7.81□□□□□ -1.16
CAPN3-219ENST00000569136 A0A096LNT2 108 aa7.8□□□□□ -1.16
CAPN3-219ENST00000569136 IGHV1-69-2A0A0G2JMI3 117 aa7.8□□□□□ -1.16
CAPN3-219ENST00000569136 M0R135 149 aa7.8□□□□□ -1.16
CAPN3-219ENST00000569136 PPIHO43447 177 aaKnown RBP7.8□□□□□ -1.16
CAPN3-219ENST00000569136 SPRY3O43610 288 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms