RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 CCDC50Q8IVM0 306 aa2.62□□□□□ -1.99
HMGB1P6-201ENST00000569046 MCOLN2Q8IZK6 566 aa2.62□□□□□ -1.99
HMGB1P6-201ENST00000569046 GABRG1Q8N1C3 465 aa2.62□□□□□ -1.99
HMGB1P6-201ENST00000569046 TRAM1L1Q8N609 369 aa2.62□□□□□ -1.99
HMGB1P6-201ENST00000569046 ZSCAN4Q8NAM6 433 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P6-201ENST00000569046 ZNRF1Q8ND25 227 aa2.62□□□□□ -1.99
HMGB1P6-201ENST00000569046 OR4A15Q8NGL6 344 aa2.62□□□□□ -1.99
HMGB1P6-201ENST00000569046 RHEBL1Q8TAI7 183 aa2.62□□□□□ -1.99
HMGB1P6-201ENST00000569046 LKAAEAR1Q8TD35 194 aa2.62□□□□□ -1.99
HMGB1P6-201ENST00000569046 MITD1Q8WV92 249 aa2.62□□□□□ -1.99
HMGB1P6-201ENST00000569046 NRBF2Q96F24 287 aa2.62□□□□□ -1.99
HMGB1P6-201ENST00000569046 CERS2Q96G23 380 aa2.62□□□□□ -1.99
HMGB1P6-201ENST00000569046 IP6K3Q96PC2 410 aa2.62□□□□□ -1.99
HMGB1P6-201ENST00000569046 CSPG4P5Q96PW8 444 aa2.62□□□□□ -1.99
HMGB1P6-201ENST00000569046 PAIP2Q9BPZ3 127 aaKnown RBP2.62□□□□□ -1.99
HMGB1P6-201ENST00000569046 PARLQ9H300 379 aa2.62□□□□□ -1.99
HMGB1P6-201ENST00000569046 GLIPR2Q9H4G4 154 aa2.62□□□□□ -1.99
HMGB1P6-201ENST00000569046 ANKRD19PQ9H560 264 aa2.62□□□□□ -1.99
HMGB1P6-201ENST00000569046 ELOVL6Q9H5J4 265 aa2.62□□□□□ -1.99
HMGB1P6-201ENST00000569046 NT5DC2Q9H857 520 aa2.62□□□□□ -1.99
HMGB1P6-201ENST00000569046 LYRM4Q9HD34 91 aa2.62□□□□□ -1.99
HMGB1P6-201ENST00000569046 IL1RAPQ9NPH3 570 aa2.62□□□□□ -1.99
HMGB1P6-201ENST00000569046 ESM1Q9NQ30 184 aa2.62□□□□□ -1.99
HMGB1P6-201ENST00000569046 STMN3Q9NZ72 180 aa2.62□□□□□ -1.99
HMGB1P6-201ENST00000569046 RWDD2AQ9UIY3 292 aa2.62□□□□□ -1.99
HMGB1P6-201ENST00000569046 RNF24Q9Y225 148 aa2.62□□□□□ -1.99
HMGB1P6-201ENST00000569046 PDE10AQ9Y233 779 aa2.62□□□□□ -1.99
HMGB1P6-201ENST00000569046 STARD10Q9Y365 291 aa2.62□□□□□ -1.99
HMGB1P6-201ENST00000569046 MRPS18CQ9Y3D5 142 aaKnown RBP2.62□□□□□ -1.99
HMGB1P6-201ENST00000569046 AK6Q9Y3D8 172 aaKnown RBP2.62□□□□□ -1.99
HMGB1P6-201ENST00000569046 RP1L1Q8IWN7 2480 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P6-201ENST00000569046 CHD3Q12873 2000 aaKnown RBP2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 NSG1A0A0A6YYJ2 146 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 TRAV17A0A0B4J275 112 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 A0A1B0GTH9 108 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 OR6C65A6NJZ3 312 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 C2orf74A8MZ97 194 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 H3BMQ9 156 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 FBP2O00757 339 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 TFECO14948 347 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 NXPH4O95158 308 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 TMEM50AO95807 157 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 IGFBP1P08833 259 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 HBQ1P09105 142 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 FREM3P0C091 2139 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 UMPSP11172 480 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 BCKDHAP12694 445 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 CD1DP15813 335 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 MAGP20916 626 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 ATP5A1P25705 553 aaKnown RBP2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 PEBP1P30086 187 aaKnown RBP2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 HSPA9P38646 679 aaKnown RBP2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 NSG1P42857 185 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 HCAR3P49019 387 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 VSX2P58304 361 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 CDK16Q00536 496 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 GPR176Q14439 515 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 ITIH4Q14624 930 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 TEX44Q53QW1 395 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 CCDC122Q5T0U0 273 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 SEL1L2Q5TEA6 688 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 NCBP2-AS2Q69YL0 99 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 PDPK2PQ6A1A2 396 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 FRMPD2BQ6IN97 320 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 SLC25A25Q6KCM7 469 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 TTC23LQ6PF05 361 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 DEGS2Q6QHC5 323 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 SPESP1Q6UW49 350 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 STAC2Q6ZMT1 411 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 SSX9Q7RTT3 188 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 APTXQ7Z2E3 356 aaKnown RBP2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 LINC00523Q86TU6 105 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 COMTD1Q86VU5 262 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 ZNF677Q86XU0 584 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 ABHD12Q8N2K0 398 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 DHRSXQ8N5I4 330 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 PQLC3Q8N755 202 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 FAM86B1Q8N7N1 296 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 OR2T33Q8NG76 320 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 OR7G2Q8NG99 324 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 OR5AR1Q8NGP9 310 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 OR2L2Q8NH16 312 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 FLVCR1-AS1Q8TAF5 88 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 LRRC20Q8TCA0 184 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 MARCH1Q8TCQ1 289 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 MAGEE2Q8TD90 523 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 BLOC1S5Q8TDH9 187 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 CD300LFQ8TDQ1 290 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 RASL10AQ92737 203 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 DNAJA3Q96EY1 480 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 RCHY1Q96PM5 261 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 ALKBH3Q96Q83 286 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 TNFRSF13CQ96RJ3 184 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 TRIB3Q96RU7 358 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 LYSMD1Q96S90 227 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 FOXC2Q99958 501 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 APOL2Q9BQE5 337 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 NIPSNAP3BQ9BS92 247 aa2.61□□□□□ -1.99
HMGB1P6-201ENST00000569046 DEFB127Q9H1M4 99 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms