RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 CCL1P22362 96 aa12.82□□□□□ -0.36
COMMD4-221ENST00000567935 AZGP1P25311 298 aaKnown RBP12.82□□□□□ -0.36
COMMD4-221ENST00000567935 OTX1P32242 354 aaPredicted RBP12.82□□□□□ -0.36
COMMD4-221ENST00000567935 CX3CR1P49238 355 aa12.82□□□□□ -0.36
COMMD4-221ENST00000567935 SRYQ05066 204 aa12.82□□□□□ -0.36
COMMD4-221ENST00000567935 ODF4Q2M2E3 257 aa12.82□□□□□ -0.36
COMMD4-221ENST00000567935 ABHD12BQ7Z5M8 362 aaPredicted RBP12.82□□□□□ -0.36
COMMD4-221ENST00000567935 SNX29P2Q8IUI4 249 aa12.82□□□□□ -0.36
COMMD4-221ENST00000567935 ZNF283Q8N7M2 679 aa12.82□□□□□ -0.36
COMMD4-221ENST00000567935 C19orf18Q8NEA5 215 aa12.82□□□□□ -0.36
COMMD4-221ENST00000567935 OR4M1Q8NGD0 313 aa12.82□□□□□ -0.36
COMMD4-221ENST00000567935 LGALS14Q8TCE9 139 aa12.82□□□□□ -0.36
COMMD4-221ENST00000567935 WDYHV1Q96HA8 205 aa12.82□□□□□ -0.36
COMMD4-221ENST00000567935 FOXB1Q99853 325 aa12.82□□□□□ -0.36
COMMD4-221ENST00000567935 ABCG5Q9H222 651 aa12.82□□□□□ -0.36
COMMD4-221ENST00000567935 GPR35Q9HC97 309 aa12.82□□□□□ -0.36
COMMD4-221ENST00000567935 GLRX2Q9NS18 164 aa12.82□□□□□ -0.36
COMMD4-221ENST00000567935 ZNF275Q9NSD4 429 aaPredicted RBP12.82□□□□□ -0.36
COMMD4-221ENST00000567935 STEAP1Q9UHE8 339 aa12.82□□□□□ -0.36
COMMD4-221ENST00000567935 ATPIF1Q9UII2 106 aa12.82□□□□□ -0.36
COMMD4-221ENST00000567935 CAMK2AQ9UQM7 478 aa12.82□□□□□ -0.36
COMMD4-221ENST00000567935 PCDHGA9Q9Y5G4 932 aaKnown RBP12.82□□□□□ -0.36
COMMD4-221ENST00000567935 DNAJC13O75165 2243 aa12.82□□□□□ -0.36
COMMD4-221ENST00000567935 SVILO95425 2214 aa12.81□□□□□ -0.36
COMMD4-221ENST00000567935 TRAV8-7A0A075B6U6 113 aa12.81□□□□□ -0.36
COMMD4-221ENST00000567935 A0A0U1RQV5 110 aa12.81□□□□□ -0.36
COMMD4-221ENST00000567935 A0A1B0GVC2 190 aa12.81□□□□□ -0.36
COMMD4-221ENST00000567935 A0A1W2PQ09 198 aa12.81□□□□□ -0.36
COMMD4-221ENST00000567935 SLC17A2O00624 439 aa12.81□□□□□ -0.36
COMMD4-221ENST00000567935 CTDSPLO15194 276 aa12.81□□□□□ -0.36
COMMD4-221ENST00000567935 SULT1B1O43704 296 aa12.81□□□□□ -0.36
COMMD4-221ENST00000567935 PAHP00439 452 aa12.81□□□□□ -0.36
COMMD4-221ENST00000567935 ERCC1P07992 297 aaPredicted RBP12.81□□□□□ -0.36
COMMD4-221ENST00000567935 SNRPBP14678 240 aaKnown RBP12.81□□□□□ -0.36
COMMD4-221ENST00000567935 HOXB4P17483 251 aaPredicted RBP12.81□□□□□ -0.36
COMMD4-221ENST00000567935 ZNF121P58317 390 aaPredicted RBP12.81□□□□□ -0.36
COMMD4-221ENST00000567935 BAK1Q16611 211 aa12.81□□□□□ -0.36
COMMD4-221ENST00000567935 HES5Q5TA89 166 aa12.81□□□□□ -0.36
COMMD4-221ENST00000567935 SP5Q6BEB4 398 aaPredicted RBP12.81□□□□□ -0.36
COMMD4-221ENST00000567935 DRAM2Q6UX65 266 aa12.81□□□□□ -0.36
COMMD4-221ENST00000567935 DOK3Q7L591 496 aa12.81□□□□□ -0.36
COMMD4-221ENST00000567935 ZNF627Q7L945 461 aa12.81□□□□□ -0.36
COMMD4-221ENST00000567935 SERPINA12Q8IW75 414 aa12.81□□□□□ -0.36
COMMD4-221ENST00000567935 CDH26Q8IXH8 852 aa12.81□□□□□ -0.36
COMMD4-221ENST00000567935 Q8NA96 180 aa12.81□□□□□ -0.36
COMMD4-221ENST00000567935 LURAP1Q96LR2 239 aa12.81□□□□□ -0.36
COMMD4-221ENST00000567935 SLC22A4Q9H015 551 aa12.81□□□□□ -0.36
COMMD4-221ENST00000567935 LIN7BQ9HAP6 207 aa12.81□□□□□ -0.36
COMMD4-221ENST00000567935 SLC17A5Q9NRA2 495 aa12.81□□□□□ -0.36
COMMD4-221ENST00000567935 C14orf119Q9NWQ9 140 aa12.81□□□□□ -0.36
COMMD4-221ENST00000567935 ZNF407Q9C0G0 2248 aa12.81□□□□□ -0.36
COMMD4-221ENST00000567935 SPG11Q96JI7 2443 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 CCDC168Q8NDH2 2452 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 ZNF587BE7ETH6 402 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 P2RY10O00398 339 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 AQP7O14520 342 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 SGCEO43556 437 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 PFDN1O60925 122 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 MAS1P04201 325 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 NTF4P34130 210 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 MNDAP41218 407 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 MAGEB1P43366 347 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 INPP1P49441 399 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 PRKXP51817 358 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 ART1P52961 327 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 MRPS10P82664 201 aaKnown RBP12.8□□□□□ -0.36
COMMD4-221ENST00000567935 TESK1Q15569 626 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 RAB11BQ15907 218 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 CEACAM16Q2WEN9 425 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 CCDC92Q53HC0 331 aaPredicted RBP12.8□□□□□ -0.36
COMMD4-221ENST00000567935 PGAP1Q75T13 922 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 DPPA2Q7Z7J5 298 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 SLC22A24Q8N4F4 322 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 OR52H1Q8NGJ2 320 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 OR5D14Q8NGL3 314 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 OR6M1Q8NGM8 313 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 OR5H6Q8NGV6 325 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 FNDC9Q8TBE3 224 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 ITFG2Q969R8 447 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 PPP1R14AQ96A00 147 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 APH1AQ96BI3 265 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 C10orf35Q96D05 121 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 S100A16Q96FQ6 103 aaKnown RBP12.8□□□□□ -0.36
COMMD4-221ENST00000567935 ALKBH3Q96Q83 286 aaPredicted RBP12.8□□□□□ -0.36
COMMD4-221ENST00000567935 PRDM14Q9GZV8 571 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 DEFB127Q9H1M4 99 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 PLEK2Q9NYT0 353 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 ZNF391Q9UJN7 358 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 TBC1D24Q9ULP9 559 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 TIMM10BQ9Y5J6 103 aa12.8□□□□□ -0.36
COMMD4-221ENST00000567935 LOC390937A0A1W2PQ73 354 aa12.79□□□□□ -0.36
COMMD4-221ENST00000567935 SLC22A20A6NK97 555 aa12.79□□□□□ -0.36
COMMD4-221ENST00000567935 M0R135 149 aa12.79□□□□□ -0.36
COMMD4-221ENST00000567935 GSTZ1O43708 216 aaPredicted RBP12.79□□□□□ -0.36
COMMD4-221ENST00000567935 ZNF20P17024 532 aa12.79□□□□□ -0.36
COMMD4-221ENST00000567935 DDOSTP39656 456 aa12.79□□□□□ -0.36
COMMD4-221ENST00000567935 MMP15P51511 669 aa12.79□□□□□ -0.36
COMMD4-221ENST00000567935 TPTEP56180 551 aa12.79□□□□□ -0.36
COMMD4-221ENST00000567935 P2RY14Q15391 338 aa12.79□□□□□ -0.36
COMMD4-221ENST00000567935 RNFT1Q5M7Z0 435 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms