RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 U3KQV3 271 aa13.11□□□□□ -0.31
CDH3-204ENST00000565453 CD300LBA8K4G0 201 aa13.1□□□□□ -0.31
CDH3-204ENST00000565453 PTBP3O95758 552 aaKnown RBP13.1□□□□□ -0.31
CDH3-204ENST00000565453 FAM107AO95990 144 aa13.1□□□□□ -0.31
CDH3-204ENST00000565453 GYPBP06028 91 aa13.1□□□□□ -0.31
CDH3-204ENST00000565453 CLUP10909 449 aa13.1□□□□□ -0.31
CDH3-204ENST00000565453 SPI1P17947 270 aa13.1□□□□□ -0.31
CDH3-204ENST00000565453 ENTPD1P49961 510 aa13.1□□□□□ -0.31
CDH3-204ENST00000565453 GLYATL3Q5SZD4 288 aa13.1□□□□□ -0.31
CDH3-204ENST00000565453 LINC01590Q5TEZ4 76 aa13.1□□□□□ -0.31
CDH3-204ENST00000565453 PRAMEF6Q5VXH4 476 aa13.1□□□□□ -0.31
CDH3-204ENST00000565453 DRAM2Q6UX65 266 aa13.1□□□□□ -0.31
CDH3-204ENST00000565453 MRPL21Q7Z2W9 205 aaKnown RBP13.1□□□□□ -0.31
CDH3-204ENST00000565453 DCXRQ7Z4W1 244 aa13.1□□□□□ -0.31
CDH3-204ENST00000565453 OR2T33Q8NG76 320 aa13.1□□□□□ -0.31
CDH3-204ENST00000565453 OR2AE1Q8NHA4 323 aa13.1□□□□□ -0.31
CDH3-204ENST00000565453 C22orf15Q8WYQ4 148 aa13.1□□□□□ -0.31
CDH3-204ENST00000565453 ERGIC1Q969X5 290 aa13.1□□□□□ -0.31
CDH3-204ENST00000565453 NIPSNAP1Q9BPW8 284 aa13.1□□□□□ -0.31
CDH3-204ENST00000565453 SSBP3Q9BWW4 388 aaPredicted RBP13.1□□□□□ -0.31
CDH3-204ENST00000565453 REEP1Q9H902 201 aa13.1□□□□□ -0.31
CDH3-204ENST00000565453 MIOXQ9UGB7 285 aa13.1□□□□□ -0.31
CDH3-204ENST00000565453 NUP50Q9UKX7 468 aa13.1□□□□□ -0.31
CDH3-204ENST00000565453 PRPF19Q9UMS4 504 aaKnown RBP13.1□□□□□ -0.31
CDH3-204ENST00000565453 PPIAL4AQ9Y536 164 aa13.1□□□□□ -0.31
CDH3-204ENST00000565453 LRRC30A6NM36 301 aa13.09□□□□□ -0.31
CDH3-204ENST00000565453 FAM20BO75063 409 aa13.09□□□□□ -0.31
CDH3-204ENST00000565453 RPS2P15880 293 aaKnown RBP13.09□□□□□ -0.31
CDH3-204ENST00000565453 FPR2P25090 351 aa13.09□□□□□ -0.31
CDH3-204ENST00000565453 CFPP27918 469 aa13.09□□□□□ -0.31
CDH3-204ENST00000565453 FMO3P31513 532 aa13.09□□□□□ -0.31
CDH3-204ENST00000565453 CD80P33681 288 aa13.09□□□□□ -0.31
CDH3-204ENST00000565453 UBA52P62987 128 aaKnown RBP13.09□□□□□ -0.31
CDH3-204ENST00000565453 ACTG1P63261 375 aa13.09□□□□□ -0.31
CDH3-204ENST00000565453 MPPED2Q15777 294 aa13.09□□□□□ -0.31
CDH3-204ENST00000565453 FAM98BQ52LJ0 330 aaKnown RBP13.09□□□□□ -0.31
CDH3-204ENST00000565453 ARMCX4Q5H9R4 360 aa13.09□□□□□ -0.31
CDH3-204ENST00000565453 CD300LDQ6UXZ3 194 aa13.09□□□□□ -0.31
CDH3-204ENST00000565453 C1orf87Q8N0U7 546 aa13.09□□□□□ -0.31
CDH3-204ENST00000565453 CCDC197Q8NCU1 140 aa13.09□□□□□ -0.31
CDH3-204ENST00000565453 SPRYD4Q8WW59 207 aaPredicted RBP13.09□□□□□ -0.31
CDH3-204ENST00000565453 SLAMF6Q96DU3 332 aa13.09□□□□□ -0.31
CDH3-204ENST00000565453 ASB9Q96DX5 294 aa13.09□□□□□ -0.31
CDH3-204ENST00000565453 NEIL1Q96FI4 390 aaPredicted RBP13.09□□□□□ -0.31
CDH3-204ENST00000565453 KCNJ15Q99712 375 aa13.09□□□□□ -0.31
CDH3-204ENST00000565453 SLC22A4Q9H015 551 aa13.09□□□□□ -0.31
CDH3-204ENST00000565453 TAS2R1Q9NYW7 299 aa13.09□□□□□ -0.31
CDH3-204ENST00000565453 ZNF69Q9UC07 566 aa13.09□□□□□ -0.31
CDH3-204ENST00000565453 OR5V1Q9UGF6 321 aa13.09□□□□□ -0.31
CDH3-204ENST00000565453 ZNF593O00488 134 aaPredicted RBP13.08□□□□□ -0.32
CDH3-204ENST00000565453 ACOT8O14734 319 aa13.08□□□□□ -0.32
CDH3-204ENST00000565453 SPARCP09486 303 aa13.08□□□□□ -0.32
CDH3-204ENST00000565453 RAP2AP10114 183 aa13.08□□□□□ -0.32
CDH3-204ENST00000565453 CA6P23280 308 aa13.08□□□□□ -0.32
CDH3-204ENST00000565453 PRKXP51817 358 aa13.08□□□□□ -0.32
CDH3-204ENST00000565453 GK3PQ14409 553 aa13.08□□□□□ -0.32
CDH3-204ENST00000565453 OR8G1Q15617 311 aa13.08□□□□□ -0.32
CDH3-204ENST00000565453 LYPD2Q6UXB3 125 aa13.08□□□□□ -0.32
CDH3-204ENST00000565453 ZNF841Q6ZN19 808 aa13.08□□□□□ -0.32
CDH3-204ENST00000565453 DOK3Q7L591 496 aa13.08□□□□□ -0.32
CDH3-204ENST00000565453 ADGRG5Q8IZF4 528 aa13.08□□□□□ -0.32
CDH3-204ENST00000565453 BCL6BQ8N143 479 aaPredicted RBP13.08□□□□□ -0.32
CDH3-204ENST00000565453 SIGLECL1Q8N7X8 197 aa13.08□□□□□ -0.32
CDH3-204ENST00000565453 OR10G2Q8NGC3 310 aa13.08□□□□□ -0.32
CDH3-204ENST00000565453 CLPTM1LQ96KA5 538 aa13.08□□□□□ -0.32
CDH3-204ENST00000565453 COPS4Q9BT78 406 aa13.08□□□□□ -0.32
CDH3-204ENST00000565453 MRI1Q9BV20 369 aa13.08□□□□□ -0.32
CDH3-204ENST00000565453 C1orf21Q9H246 121 aa13.08□□□□□ -0.32
CDH3-204ENST00000565453 NTN4Q9HB63 628 aa13.08□□□□□ -0.32
CDH3-204ENST00000565453 CMC2Q9NRP2 79 aa13.08□□□□□ -0.32
CDH3-204ENST00000565453 IGHV2-70DA0A0C4DH43 119 aa13.07□□□□□ -0.32
CDH3-204ENST00000565453 GGT3PA6NGU5 568 aa13.07□□□□□ -0.32
CDH3-204ENST00000565453 IFNGP01579 166 aa13.07□□□□□ -0.32
CDH3-204ENST00000565453 PPIAL4GP0DN37 164 aa13.07□□□□□ -0.32
CDH3-204ENST00000565453 SLC2A1P11166 492 aa13.07□□□□□ -0.32
CDH3-204ENST00000565453 GNB2P62879 340 aa13.07□□□□□ -0.32
CDH3-204ENST00000565453 HOXA4Q00056 320 aaPredicted RBP13.07□□□□□ -0.32
CDH3-204ENST00000565453 DCDC5Q6ZRR9 648 aa13.07□□□□□ -0.32
CDH3-204ENST00000565453 C19orf18Q8NEA5 215 aa13.07□□□□□ -0.32
CDH3-204ENST00000565453 OR8B3Q8NGG8 313 aa13.07□□□□□ -0.32
CDH3-204ENST00000565453 OR11L1Q8NGX0 322 aa13.07□□□□□ -0.32
CDH3-204ENST00000565453 RAB40AQ8WXH6 277 aa13.07□□□□□ -0.32
CDH3-204ENST00000565453 SPSB4Q96A44 273 aa13.07□□□□□ -0.32
CDH3-204ENST00000565453 CCDC124Q96CT7 223 aaKnown RBP13.07□□□□□ -0.32
CDH3-204ENST00000565453 ZNF48Q96MX3 618 aaPredicted RBP13.07□□□□□ -0.32
CDH3-204ENST00000565453 OR8B2Q96RD0 313 aa13.07□□□□□ -0.32
CDH3-204ENST00000565453 FEVQ99581 238 aa13.07□□□□□ -0.32
CDH3-204ENST00000565453 ADAT1Q9BUB4 502 aaKnown RBP13.07□□□□□ -0.32
CDH3-204ENST00000565453 MARCH7Q9H992 704 aa13.07□□□□□ -0.32
CDH3-204ENST00000565453 CENPMQ9NSP4 180 aa13.07□□□□□ -0.32
CDH3-204ENST00000565453 UFSP2Q9NUQ7 469 aa13.07□□□□□ -0.32
CDH3-204ENST00000565453 MRPL15Q9P015 296 aaKnown RBP13.07□□□□□ -0.32
CDH3-204ENST00000565453 NOP16Q9Y3C1 178 aaKnown RBP13.07□□□□□ -0.32
CDH3-204ENST00000565453 KIR2DS1A0A191URI9 304 aa13.06□□□□□ -0.32
CDH3-204ENST00000565453 DHRS12A0PJE2 317 aa13.06□□□□□ -0.32
CDH3-204ENST00000565453 ARRDC5A6NEK1 342 aa13.06□□□□□ -0.32
CDH3-204ENST00000565453 ZNF878C9JN71 531 aa13.06□□□□□ -0.32
CDH3-204ENST00000565453 GMDSO60547 372 aa13.06□□□□□ -0.32
CDH3-204ENST00000565453 IRF2P14316 349 aa13.06□□□□□ -0.32
CDH3-204ENST00000565453 ZNF3P17036 446 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms