RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 SPTSSAQ969W0 71 aa15.53■□□□□ 0.08
CLN6-204ENST00000564752 ZNF799Q96GE5 643 aa15.53■□□□□ 0.08
CLN6-204ENST00000564752 NMNAT2Q9BZQ4 307 aa15.53■□□□□ 0.08
CLN6-204ENST00000564752 YY1AP1Q9H869 796 aa15.53■□□□□ 0.08
CLN6-204ENST00000564752 GCM1Q9NP62 436 aa15.53■□□□□ 0.08
CLN6-204ENST00000564752 CMC2Q9NRP2 79 aa15.53■□□□□ 0.08
CLN6-204ENST00000564752 PDP1Q9P0J1 537 aaPredicted RBP15.53■□□□□ 0.08
CLN6-204ENST00000564752 MGAM2Q2M2H8 2515 aa15.53■□□□□ 0.08
CLN6-204ENST00000564752 TRRAPQ9Y4A5 3859 aa15.52■□□□□ 0.08
CLN6-204ENST00000564752 A8MXK9 166 aa15.52■□□□□ 0.08
CLN6-204ENST00000564752 IQCF6A8MYZ5 107 aa15.52■□□□□ 0.08
CLN6-204ENST00000564752 CLUP10909 449 aa15.52■□□□□ 0.08
CLN6-204ENST00000564752 SELEP16581 610 aa15.52■□□□□ 0.08
CLN6-204ENST00000564752 GRK5P34947 590 aa15.52■□□□□ 0.08
CLN6-204ENST00000564752 MDH2P40926 338 aaKnown RBP15.52■□□□□ 0.08
CLN6-204ENST00000564752 ENTPD1P49961 510 aa15.52■□□□□ 0.08
CLN6-204ENST00000564752 AWAT1Q58HT5 328 aa15.52■□□□□ 0.08
CLN6-204ENST00000564752 SLC27A4Q6P1M0 643 aa15.52■□□□□ 0.08
CLN6-204ENST00000564752 DCXRQ7Z4W1 244 aa15.52■□□□□ 0.08
CLN6-204ENST00000564752 IQCF1Q8N6M8 205 aa15.52■□□□□ 0.08
CLN6-204ENST00000564752 OR10S1Q8NGN2 331 aa15.52■□□□□ 0.08
CLN6-204ENST00000564752 OR13G1Q8NGZ3 307 aa15.52■□□□□ 0.08
CLN6-204ENST00000564752 COPS4Q9BT78 406 aa15.52■□□□□ 0.08
CLN6-204ENST00000564752 DDX28Q9NUL7 540 aaKnown RBP15.52■□□□□ 0.08
CLN6-204ENST00000564752 NUP50Q9UKX7 468 aa15.52■□□□□ 0.08
CLN6-204ENST00000564752 POMPQ9Y244 141 aa15.52■□□□□ 0.08
CLN6-204ENST00000564752 PPIAL4AQ9Y536 164 aa15.52■□□□□ 0.08
CLN6-204ENST00000564752 INSIG2Q9Y5U4 225 aa15.52■□□□□ 0.08
CLN6-204ENST00000564752 IFNL4K9M1U5 179 aa15.51■□□□□ 0.07
CLN6-204ENST00000564752 FKBP6O75344 327 aa15.51■□□□□ 0.07
CLN6-204ENST00000564752 PSKH1P11801 424 aa15.51■□□□□ 0.07
CLN6-204ENST00000564752 MMP16P51512 607 aa15.51■□□□□ 0.07
CLN6-204ENST00000564752 BLVRAP53004 296 aa15.51■□□□□ 0.07
CLN6-204ENST00000564752 PRSS12P56730 875 aa15.51■□□□□ 0.07
CLN6-204ENST00000564752 CBX1P83916 185 aa15.51■□□□□ 0.07
CLN6-204ENST00000564752 GK2Q14410 553 aaPredicted RBP15.51■□□□□ 0.07
CLN6-204ENST00000564752 ARMCX4Q5H9R4 360 aa15.51■□□□□ 0.07
CLN6-204ENST00000564752 KLF17Q5JT82 389 aaPredicted RBP15.51■□□□□ 0.07
CLN6-204ENST00000564752 TMEM179BQ7Z7N9 219 aa15.51■□□□□ 0.07
CLN6-204ENST00000564752 SIGLECL1Q8N7X8 197 aa15.51■□□□□ 0.07
CLN6-204ENST00000564752 ZNF511Q8NB15 262 aa15.51■□□□□ 0.07
CLN6-204ENST00000564752 OTULINQ96BN8 352 aa15.51■□□□□ 0.07
CLN6-204ENST00000564752 ZNF556Q9HAH1 456 aa15.51■□□□□ 0.07
CLN6-204ENST00000564752 ZNF69Q9UC07 566 aa15.51■□□□□ 0.07
CLN6-204ENST00000564752 TCRBV3S1A0A5B6 114 aa15.5■□□□□ 0.07
CLN6-204ENST00000564752 WNT2P09544 360 aa15.5■□□□□ 0.07
CLN6-204ENST00000564752 PAICSP22234 425 aaKnown RBP15.5■□□□□ 0.07
CLN6-204ENST00000564752 CPT2P23786 658 aa15.5■□□□□ 0.07
CLN6-204ENST00000564752 POU1F1P28069 291 aa15.5■□□□□ 0.07
CLN6-204ENST00000564752 SRP9P49458 86 aaKnown RBP15.5■□□□□ 0.07
CLN6-204ENST00000564752 PAX8Q06710 450 aa15.5■□□□□ 0.07
CLN6-204ENST00000564752 TAF13Q15543 124 aa15.5■□□□□ 0.07
CLN6-204ENST00000564752 ESCO2Q56NI9 601 aa15.5■□□□□ 0.07
CLN6-204ENST00000564752 RBMS3Q6XE24 437 aaKnown RBP15.5■□□□□ 0.07
CLN6-204ENST00000564752 PGAP1Q75T13 922 aa15.5■□□□□ 0.07
CLN6-204ENST00000564752 DOK3Q7L591 496 aa15.5■□□□□ 0.07
CLN6-204ENST00000564752 MRPL21Q7Z2W9 205 aaKnown RBP15.5■□□□□ 0.07
CLN6-204ENST00000564752 NAA40Q86UY6 237 aa15.5■□□□□ 0.07
CLN6-204ENST00000564752 MUC20Q8N307 709 aaPredicted RBP15.5■□□□□ 0.07
CLN6-204ENST00000564752 SLAMF6Q96DU3 332 aa15.5■□□□□ 0.07
CLN6-204ENST00000564752 MEGF10Q96KG7 1140 aa15.5■□□□□ 0.07
CLN6-204ENST00000564752 SLC30A2Q9BRI3 323 aa15.5■□□□□ 0.07
CLN6-204ENST00000564752 MED20Q9H944 212 aa15.5■□□□□ 0.07
CLN6-204ENST00000564752 TMEM165Q9HC07 324 aa15.5■□□□□ 0.07
CLN6-204ENST00000564752 FAM183AA6NL82 134 aa15.49■□□□□ 0.07
CLN6-204ENST00000564752 CEACAM18A8MTB9 384 aa15.49■□□□□ 0.07
CLN6-204ENST00000564752 ZNF878C9JN71 531 aa15.49■□□□□ 0.07
CLN6-204ENST00000564752 ZNF593O00488 134 aaPredicted RBP15.49■□□□□ 0.07
CLN6-204ENST00000564752 PRTN3P24158 256 aa15.49■□□□□ 0.07
CLN6-204ENST00000564752 OTX1P32242 354 aaPredicted RBP15.49■□□□□ 0.07
CLN6-204ENST00000564752 PCK2Q16822 640 aa15.49■□□□□ 0.07
CLN6-204ENST00000564752 DRAM2Q6UX65 266 aa15.49■□□□□ 0.07
CLN6-204ENST00000564752 HS3ST5Q8IZT8 346 aa15.49■□□□□ 0.07
CLN6-204ENST00000564752 BCL6BQ8N143 479 aaPredicted RBP15.49■□□□□ 0.07
CLN6-204ENST00000564752 ZNF420Q8TAQ5 688 aaPredicted RBP15.49■□□□□ 0.07
CLN6-204ENST00000564752 SLCO4A1Q96BD0 722 aa15.49■□□□□ 0.07
CLN6-204ENST00000564752 MRI1Q9BV20 369 aa15.49■□□□□ 0.07
CLN6-204ENST00000564752 CENPMQ9NSP4 180 aa15.49■□□□□ 0.07
CLN6-204ENST00000564752 TMEM100Q9NV29 134 aa15.49■□□□□ 0.07
CLN6-204ENST00000564752 DNAJB9Q9UBS3 223 aa15.49■□□□□ 0.07
CLN6-204ENST00000564752 LRCH1Q9Y2L9 728 aa15.49■□□□□ 0.07
CLN6-204ENST00000564752 H0YL77 283 aa15.48■□□□□ 0.07
CLN6-204ENST00000564752 MLNRO43193 412 aa15.48■□□□□ 0.07
CLN6-204ENST00000564752 HKR1P10072 659 aa15.48■□□□□ 0.07
CLN6-204ENST00000564752 OSMP13725 252 aa15.48■□□□□ 0.07
CLN6-204ENST00000564752 ANXA8P13928 327 aa15.48■□□□□ 0.07
CLN6-204ENST00000564752 CD80P33681 288 aa15.48■□□□□ 0.07
CLN6-204ENST00000564752 PAX2Q02962 417 aa15.48■□□□□ 0.07
CLN6-204ENST00000564752 BNIP1Q12981 228 aa15.48■□□□□ 0.07
CLN6-204ENST00000564752 SNAI3Q3KNW1 292 aa15.48■□□□□ 0.07
CLN6-204ENST00000564752 TEX30Q5JUR7 227 aa15.48■□□□□ 0.07
CLN6-204ENST00000564752 LINC01590Q5TEZ4 76 aa15.48■□□□□ 0.07
CLN6-204ENST00000564752 ERI1Q8IV48 349 aaKnown RBP15.48■□□□□ 0.07
CLN6-204ENST00000564752 PAPD5Q8NDF8 572 aaKnown RBP15.48■□□□□ 0.07
CLN6-204ENST00000564752 OR6N2Q8NGY6 317 aa15.48■□□□□ 0.07
CLN6-204ENST00000564752 SPRYD4Q8WW59 207 aaPredicted RBP15.48■□□□□ 0.07
CLN6-204ENST00000564752 INTS14Q96SY0 518 aa15.48■□□□□ 0.07
CLN6-204ENST00000564752 KCNJ15Q99712 375 aa15.48■□□□□ 0.07
CLN6-204ENST00000564752 CADM1Q9BY67 442 aaKnown RBP15.48■□□□□ 0.07
CLN6-204ENST00000564752 KIF17Q9P2E2 1029 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms