RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 SRP72O76094 671 aaKnown RBP2.99□□□□□ -1.93
LINC00560-201ENST00000564593 FABP3P05413 133 aa2.99□□□□□ -1.93
LINC00560-201ENST00000564593 HOXC4P09017 264 aaPredicted RBP2.99□□□□□ -1.93
LINC00560-201ENST00000564593 GNAO1P09471 354 aa2.99□□□□□ -1.93
LINC00560-201ENST00000564593 SLC25A11Q02978 314 aaKnown RBP2.99□□□□□ -1.93
LINC00560-201ENST00000564593 MADCAM1Q13477 382 aa2.99□□□□□ -1.93
LINC00560-201ENST00000564593 CHRNA6Q15825 494 aa2.99□□□□□ -1.93
LINC00560-201ENST00000564593 HES5Q5TA89 166 aa2.99□□□□□ -1.93
LINC00560-201ENST00000564593 TEX43Q6ZNM6 134 aa2.99□□□□□ -1.93
LINC00560-201ENST00000564593 HDDC2Q7Z4H3 204 aa2.99□□□□□ -1.93
LINC00560-201ENST00000564593 LUZP2Q86TE4 346 aa2.99□□□□□ -1.93
LINC00560-201ENST00000564593 IFT20Q8IY31 132 aa2.99□□□□□ -1.93
LINC00560-201ENST00000564593 MYOCDQ8IZQ8 938 aa2.99□□□□□ -1.93
LINC00560-201ENST00000564593 IQCKQ8N0W5 287 aa2.99□□□□□ -1.93
LINC00560-201ENST00000564593 PRELID2Q8N945 189 aa2.99□□□□□ -1.93
LINC00560-201ENST00000564593 Q8N976 141 aa2.99□□□□□ -1.93
LINC00560-201ENST00000564593 OR4S2Q8NH73 311 aa2.99□□□□□ -1.93
LINC00560-201ENST00000564593 ZNF596Q8TC21 504 aa2.99□□□□□ -1.93
LINC00560-201ENST00000564593 ZFP90Q8TF47 636 aa2.99□□□□□ -1.93
LINC00560-201ENST00000564593 EXOSC8Q96B26 276 aaKnown RBP2.99□□□□□ -1.93
LINC00560-201ENST00000564593 TPK1Q9H3S4 243 aa2.99□□□□□ -1.93
LINC00560-201ENST00000564593 GPATCH2LQ9NWQ4 482 aa2.99□□□□□ -1.93
LINC00560-201ENST00000564593 HRASLS2Q9NWW9 162 aa2.99□□□□□ -1.93
LINC00560-201ENST00000564593 GCNT4Q9P109 453 aa2.99□□□□□ -1.93
LINC00560-201ENST00000564593 GUCA1BQ9UMX6 200 aa2.99□□□□□ -1.93
LINC00560-201ENST00000564593 LRP4O75096 1905 aa2.99□□□□□ -1.93
LINC00560-201ENST00000564593 IGLV3-16A0A075B6K0 115 aa2.98□□□□□ -1.93
LINC00560-201ENST00000564593 ZBTB5O15062 677 aa2.98□□□□□ -1.93
LINC00560-201ENST00000564593 CETN3O15182 167 aa2.98□□□□□ -1.93
LINC00560-201ENST00000564593 LCA5LO95447 670 aa2.98□□□□□ -1.93
LINC00560-201ENST00000564593 RAB3DO95716 219 aa2.98□□□□□ -1.93
LINC00560-201ENST00000564593 ACSM4P0C7M7 580 aa2.98□□□□□ -1.93
LINC00560-201ENST00000564593 GTF2E2P29084 291 aaKnown RBP2.98□□□□□ -1.93
LINC00560-201ENST00000564593 MAS1LP35410 378 aa2.98□□□□□ -1.93
LINC00560-201ENST00000564593 CX3CR1P49238 355 aa2.98□□□□□ -1.93
LINC00560-201ENST00000564593 FKBP1AP62942 108 aaKnown RBP2.98□□□□□ -1.93
LINC00560-201ENST00000564593 DYNLL1P63167 89 aaKnown RBP2.98□□□□□ -1.93
LINC00560-201ENST00000564593 MERTKQ12866 999 aa2.98□□□□□ -1.93
LINC00560-201ENST00000564593 SELENBP1Q13228 472 aa2.98□□□□□ -1.93
LINC00560-201ENST00000564593 CASP8Q14790 479 aa2.98□□□□□ -1.93
LINC00560-201ENST00000564593 POU2AF1Q16633 256 aa2.98□□□□□ -1.93
LINC00560-201ENST00000564593 HSP90AA4PQ58FG1 418 aa2.98□□□□□ -1.93
LINC00560-201ENST00000564593 LCE3AQ5TA76 89 aa2.98□□□□□ -1.93
LINC00560-201ENST00000564593 OR52W1Q6IF63 320 aa2.98□□□□□ -1.93
LINC00560-201ENST00000564593 C8orf74Q6P047 294 aa2.98□□□□□ -1.93
LINC00560-201ENST00000564593 BZW1Q7L1Q6 419 aaKnown RBP2.98□□□□□ -1.93
LINC00560-201ENST00000564593 CMTM1Q8IZ96 169 aa2.98□□□□□ -1.93
LINC00560-201ENST00000564593 SLC35F6Q8N357 371 aa2.98□□□□□ -1.93
LINC00560-201ENST00000564593 LRRC45Q96CN5 670 aa2.98□□□□□ -1.93
LINC00560-201ENST00000564593 DUS3LQ96G46 650 aaKnown RBP2.98□□□□□ -1.93
LINC00560-201ENST00000564593 WFIKKN1Q96NZ8 548 aa2.98□□□□□ -1.93
LINC00560-201ENST00000564593 SLC17A9Q9BYT1 436 aa2.98□□□□□ -1.93
LINC00560-201ENST00000564593 STMN4Q9H169 189 aaPredicted RBP2.98□□□□□ -1.93
LINC00560-201ENST00000564593 BLZF1Q9H2G9 400 aa2.98□□□□□ -1.93
LINC00560-201ENST00000564593 GEMIN7Q9H840 131 aaKnown RBP2.98□□□□□ -1.93
LINC00560-201ENST00000564593 PTTG3PQ9NZH4 202 aa2.98□□□□□ -1.93
LINC00560-201ENST00000564593 LGALS13Q9UHV8 139 aa2.98□□□□□ -1.93
LINC00560-201ENST00000564593 KLK12Q9UKR0 248 aa2.98□□□□□ -1.93
LINC00560-201ENST00000564593 ST3GAL6Q9Y274 331 aa2.98□□□□□ -1.93
LINC00560-201ENST00000564593 ANKRD31Q8N7Z5 1873 aa2.98□□□□□ -1.93
LINC00560-201ENST00000564593 IGLV4-69A0A075B6H9 119 aa2.97□□□□□ -1.93
LINC00560-201ENST00000564593 BTNL10A8MVZ5 291 aa2.97□□□□□ -1.93
LINC00560-201ENST00000564593 H0YHG0 523 aa2.97□□□□□ -1.93
LINC00560-201ENST00000564593 H0YIV9 168 aa2.97□□□□□ -1.93
LINC00560-201ENST00000564593 L7N2F9 121 aa2.97□□□□□ -1.93
LINC00560-201ENST00000564593 NDUFAB1O14561 156 aa2.97□□□□□ -1.93
LINC00560-201ENST00000564593 POLR3GO15318 223 aaPredicted RBP2.97□□□□□ -1.93
LINC00560-201ENST00000564593 ANGPTL7O43827 346 aa2.97□□□□□ -1.93
LINC00560-201ENST00000564593 OR2F2O95006 317 aa2.97□□□□□ -1.93
LINC00560-201ENST00000564593 PRPS2P11908 318 aa2.97□□□□□ -1.93
LINC00560-201ENST00000564593 CDKN2BP42772 138 aa2.97□□□□□ -1.93
LINC00560-201ENST00000564593 MXD1Q05195 221 aa2.97□□□□□ -1.93
LINC00560-201ENST00000564593 PTPN20Q4JDL3 420 aa2.97□□□□□ -1.93
LINC00560-201ENST00000564593 PPP1R2P3Q6NXS1 205 aa2.97□□□□□ -1.93
LINC00560-201ENST00000564593 ANGPTL8Q6UXH0 198 aa2.97□□□□□ -1.93
LINC00560-201ENST00000564593 EIF3MQ7L2H7 374 aaKnown RBP2.97□□□□□ -1.93
LINC00560-201ENST00000564593 MMGT1Q8N4V1 131 aa2.97□□□□□ -1.93
LINC00560-201ENST00000564593 CREB3L1Q96BA8 519 aa2.97□□□□□ -1.93
LINC00560-201ENST00000564593 BMFQ96LC9 184 aa2.97□□□□□ -1.93
LINC00560-201ENST00000564593 TIPINQ9BVW5 301 aa2.97□□□□□ -1.93
LINC00560-201ENST00000564593 NEUROG2Q9H2A3 272 aa2.97□□□□□ -1.93
LINC00560-201ENST00000564593 PSTPIP2Q9H939 334 aa2.97□□□□□ -1.93
LINC00560-201ENST00000564593 CD209Q9NNX6 404 aa2.97□□□□□ -1.93
LINC00560-201ENST00000564593 RAB26Q9ULW5 256 aa2.97□□□□□ -1.93
LINC00560-201ENST00000564593 SNX12Q9UMY4 172 aa2.97□□□□□ -1.93
LINC00560-201ENST00000564593 CHTOPQ9Y3Y2 248 aaKnown RBP2.97□□□□□ -1.93
LINC00560-201ENST00000564593 MYH9P35579 1960 aaKnown RBP2.97□□□□□ -1.93
LINC00560-201ENST00000564593 GOLGA6L7A0A1B0GV03 622 aa2.96□□□□□ -1.94
LINC00560-201ENST00000564593 ANKRD63C9JTQ0 380 aa2.96□□□□□ -1.94
LINC00560-201ENST00000564593 INS-IGF2F8WCM5 200 aa2.96□□□□□ -1.94
LINC00560-201ENST00000564593 PGRMC1O00264 195 aaKnown RBP2.96□□□□□ -1.94
LINC00560-201ENST00000564593 KLRC4O43908 158 aa2.96□□□□□ -1.94
LINC00560-201ENST00000564593 CHST1O43916 411 aa2.96□□□□□ -1.94
LINC00560-201ENST00000564593 CACNG3O60359 315 aa2.96□□□□□ -1.94
LINC00560-201ENST00000564593 NMT2O60551 498 aa2.96□□□□□ -1.94
LINC00560-201ENST00000564593 SPAG7O75391 227 aa2.96□□□□□ -1.94
LINC00560-201ENST00000564593 RHOXF2BP0C7M4 288 aa2.96□□□□□ -1.94
LINC00560-201ENST00000564593 MYL2P10916 166 aa2.96□□□□□ -1.94
LINC00560-201ENST00000564593 GALP22466 123 aa2.96□□□□□ -1.94
LINC00560-201ENST00000564593 CEACAM6P40199 344 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms