RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 IFNGP01579 166 aa14.82□□□□□ -0.04
NME3-205ENST00000563854 PPIAL4FP0DN26 164 aa14.82□□□□□ -0.04
NME3-205ENST00000563854 ZNF12P17014 697 aa14.82□□□□□ -0.04
NME3-205ENST00000563854 SPI1P17947 270 aa14.82□□□□□ -0.04
NME3-205ENST00000563854 ANOS1P23352 680 aa14.82□□□□□ -0.04
NME3-205ENST00000563854 FPR2P25090 351 aa14.82□□□□□ -0.04
NME3-205ENST00000563854 PMELP40967 661 aa14.82□□□□□ -0.04
NME3-205ENST00000563854 GNB2P62879 340 aa14.82□□□□□ -0.04
NME3-205ENST00000563854 ZNF92Q03936 586 aa14.82□□□□□ -0.04
NME3-205ENST00000563854 GLYATL3Q5SZD4 288 aa14.82□□□□□ -0.04
NME3-205ENST00000563854 ZNF362Q5T0B9 420 aaPredicted RBP14.82□□□□□ -0.04
NME3-205ENST00000563854 USP43Q70EL4 1123 aa14.82□□□□□ -0.04
NME3-205ENST00000563854 KLBQ86Z14 1044 aa14.82□□□□□ -0.04
NME3-205ENST00000563854 IQCF1Q8N6M8 205 aa14.82□□□□□ -0.04
NME3-205ENST00000563854 OR11L1Q8NGX0 322 aa14.82□□□□□ -0.04
NME3-205ENST00000563854 TEX47Q8TBZ9 253 aa14.82□□□□□ -0.04
NME3-205ENST00000563854 GCDHQ92947 438 aaPredicted RBP14.82□□□□□ -0.04
NME3-205ENST00000563854 DVL3Q92997 716 aaPredicted RBP14.82□□□□□ -0.04
NME3-205ENST00000563854 POP5Q969H6 163 aaKnown RBP14.82□□□□□ -0.04
NME3-205ENST00000563854 SLAMF6Q96DU3 332 aa14.82□□□□□ -0.04
NME3-205ENST00000563854 TMEM246Q9BRR3 403 aa14.82□□□□□ -0.04
NME3-205ENST00000563854 RBM4Q9BWF3 364 aaKnown RBP14.82□□□□□ -0.04
NME3-205ENST00000563854 TMEM165Q9HC07 324 aa14.82□□□□□ -0.04
NME3-205ENST00000563854 DDX28Q9NUL7 540 aaKnown RBP14.82□□□□□ -0.04
NME3-205ENST00000563854 PRPF19Q9UMS4 504 aaKnown RBP14.82□□□□□ -0.04
NME3-205ENST00000563854 BAIAP2Q9UQB8 552 aa14.82□□□□□ -0.04
NME3-205ENST00000563854 PPIAL4AQ9Y536 164 aa14.82□□□□□ -0.04
NME3-205ENST00000563854 ANK2Q01484 3957 aa14.82□□□□□ -0.04
NME3-205ENST00000563854 CD300LBA8K4G0 201 aa14.81□□□□□ -0.04
NME3-205ENST00000563854 H3BN98 237 aa14.81□□□□□ -0.04
NME3-205ENST00000563854 ZNF593O00488 134 aaPredicted RBP14.81□□□□□ -0.04
NME3-205ENST00000563854 FAM20BO75063 409 aa14.81□□□□□ -0.04
NME3-205ENST00000563854 FSHBP01225 129 aa14.81□□□□□ -0.04
NME3-205ENST00000563854 WNT2P09544 360 aa14.81□□□□□ -0.04
NME3-205ENST00000563854 ZNF3P17036 446 aa14.81□□□□□ -0.04
NME3-205ENST00000563854 MAB21L1Q13394 359 aa14.81□□□□□ -0.04
NME3-205ENST00000563854 DRAM2Q6UX65 266 aa14.81□□□□□ -0.04
NME3-205ENST00000563854 BOLLQ8N9W6 283 aaKnown RBP14.81□□□□□ -0.04
NME3-205ENST00000563854 OR8B3Q8NGG8 313 aa14.81□□□□□ -0.04
NME3-205ENST00000563854 ASB9Q96DX5 294 aa14.81□□□□□ -0.04
NME3-205ENST00000563854 NEIL1Q96FI4 390 aaPredicted RBP14.81□□□□□ -0.04
NME3-205ENST00000563854 OR8B2Q96RD0 313 aa14.81□□□□□ -0.04
NME3-205ENST00000563854 NIPSNAP1Q9BPW8 284 aa14.81□□□□□ -0.04
NME3-205ENST00000563854 THTPAQ9BU02 230 aa14.81□□□□□ -0.04
NME3-205ENST00000563854 DGCR6LQ9BY27 220 aa14.81□□□□□ -0.04
NME3-205ENST00000563854 MED20Q9H944 212 aa14.81□□□□□ -0.04
NME3-205ENST00000563854 ESM1Q9NQ30 184 aa14.81□□□□□ -0.04
NME3-205ENST00000563854 MIOXQ9UGB7 285 aa14.81□□□□□ -0.04
NME3-205ENST00000563854 IGHV3OR16-10A0A075B7F0 116 aa14.8□□□□□ -0.04
NME3-205ENST00000563854 FAM183AA6NL82 134 aa14.8□□□□□ -0.04
NME3-205ENST00000563854 ZNF878C9JN71 531 aa14.8□□□□□ -0.04
NME3-205ENST00000563854 TBX1O43435 398 aa14.8□□□□□ -0.04
NME3-205ENST00000563854 CST1P01037 141 aa14.8□□□□□ -0.04
NME3-205ENST00000563854 T-ENOLP0DO92 83 aa14.8□□□□□ -0.04
NME3-205ENST00000563854 RAP2AP10114 183 aa14.8□□□□□ -0.04
NME3-205ENST00000563854 SLC25A1P53007 311 aa14.8□□□□□ -0.04
NME3-205ENST00000563854 HOXA4Q00056 320 aaPredicted RBP14.8□□□□□ -0.04
NME3-205ENST00000563854 EIF2B1Q14232 305 aaKnown RBP14.8□□□□□ -0.04
NME3-205ENST00000563854 MPPED2Q15777 294 aa14.8□□□□□ -0.04
NME3-205ENST00000563854 ZNF181Q2M3W8 571 aa14.8□□□□□ -0.04
NME3-205ENST00000563854 ZNF404Q494X3 552 aa14.8□□□□□ -0.04
NME3-205ENST00000563854 BTNL3Q6UXE8 466 aa14.8□□□□□ -0.04
NME3-205ENST00000563854 RBMS3Q6XE24 437 aaKnown RBP14.8□□□□□ -0.04
NME3-205ENST00000563854 NLRC3Q7RTR2 1065 aa14.8□□□□□ -0.04
NME3-205ENST00000563854 ERI1Q8IV48 349 aaKnown RBP14.8□□□□□ -0.04
NME3-205ENST00000563854 SIGLECL1Q8N7X8 197 aa14.8□□□□□ -0.04
NME3-205ENST00000563854 OR6N2Q8NGY6 317 aa14.8□□□□□ -0.04
NME3-205ENST00000563854 FAM216AQ8WUB2 273 aa14.8□□□□□ -0.04
NME3-205ENST00000563854 PLEKHA8Q96JA3 519 aa14.8□□□□□ -0.04
NME3-205ENST00000563854 KCNJ15Q99712 375 aa14.8□□□□□ -0.04
NME3-205ENST00000563854 MMADHCQ9H3L0 296 aaPredicted RBP14.8□□□□□ -0.04
NME3-205ENST00000563854 NUP50Q9UKX7 468 aa14.8□□□□□ -0.04
NME3-205ENST00000563854 POLR3KQ9Y2Y1 108 aaPredicted RBP14.8□□□□□ -0.04
NME3-205ENST00000563854 NOP16Q9Y3C1 178 aaKnown RBP14.8□□□□□ -0.04
NME3-205ENST00000563854 GNGT2O14610 69 aa14.79□□□□□ -0.04
NME3-205ENST00000563854 ANXA2P07355 339 aaKnown RBP14.79□□□□□ -0.04
NME3-205ENST00000563854 POU1F1P28069 291 aa14.79□□□□□ -0.04
NME3-205ENST00000563854 HSD11B1P28845 292 aa14.79□□□□□ -0.04
NME3-205ENST00000563854 CD200P41217 278 aa14.79□□□□□ -0.04
NME3-205ENST00000563854 PITPNBP48739 271 aa14.79□□□□□ -0.04
NME3-205ENST00000563854 OR56B2PQ8NGI1 322 aa14.79□□□□□ -0.04
NME3-205ENST00000563854 GIPC3Q8TF64 312 aa14.79□□□□□ -0.04
NME3-205ENST00000563854 DUX5Q96PT3 197 aa14.79□□□□□ -0.04
NME3-205ENST00000563854 FEVQ99581 238 aa14.79□□□□□ -0.04
NME3-205ENST00000563854 CHID1Q9BWS9 393 aa14.79□□□□□ -0.04
NME3-205ENST00000563854 NMNAT2Q9BZQ4 307 aa14.79□□□□□ -0.04
NME3-205ENST00000563854 FN3KRPQ9HA64 309 aa14.79□□□□□ -0.04
NME3-205ENST00000563854 ZNF69Q9UC07 566 aa14.79□□□□□ -0.04
NME3-205ENST00000563854 A0A1B0GWJ7 208 aa14.78□□□□□ -0.04
NME3-205ENST00000563854 DHRS12A0PJE2 317 aa14.78□□□□□ -0.04
NME3-205ENST00000563854 A6NLC8 198 aa14.78□□□□□ -0.04
NME3-205ENST00000563854 CFPP27918 469 aa14.78□□□□□ -0.04
NME3-205ENST00000563854 OTX1P32242 354 aaPredicted RBP14.78□□□□□ -0.04
NME3-205ENST00000563854 CD80P33681 288 aa14.78□□□□□ -0.04
NME3-205ENST00000563854 GATA4P43694 442 aa14.78□□□□□ -0.04
NME3-205ENST00000563854 CX3CR1P49238 355 aa14.78□□□□□ -0.04
NME3-205ENST00000563854 GFOD2Q3B7J2 385 aa14.78□□□□□ -0.04
NME3-205ENST00000563854 KLF17Q5JT82 389 aaPredicted RBP14.78□□□□□ -0.04
NME3-205ENST00000563854 LYPD2Q6UXB3 125 aa14.78□□□□□ -0.04
NME3-205ENST00000563854 ADGRG5Q8IZF4 528 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms