RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 PSMB10P40306 273 aa14.37□□□□□ -0.11
VPS9D1-203ENST00000563798 FOXL1Q12952 345 aa14.37□□□□□ -0.11
VPS9D1-203ENST00000563798 TEX30Q5JUR7 227 aa14.37□□□□□ -0.11
VPS9D1-203ENST00000563798 ZNF841Q6ZN19 808 aa14.37□□□□□ -0.11
VPS9D1-203ENST00000563798 MRPL21Q7Z2W9 205 aaKnown RBP14.37□□□□□ -0.11
VPS9D1-203ENST00000563798 BCL6BQ8N143 479 aaPredicted RBP14.37□□□□□ -0.11
VPS9D1-203ENST00000563798 ARHGAP24Q8N264 748 aa14.37□□□□□ -0.11
VPS9D1-203ENST00000563798 CYB561A3Q8NBI2 242 aa14.37□□□□□ -0.11
VPS9D1-203ENST00000563798 SLC37A3Q8NCC5 494 aa14.37□□□□□ -0.11
VPS9D1-203ENST00000563798 PROKR2Q8NFJ6 384 aa14.37□□□□□ -0.11
VPS9D1-203ENST00000563798 OR9Q2Q8NGE9 314 aa14.37□□□□□ -0.11
VPS9D1-203ENST00000563798 OR8B3Q8NGG8 313 aa14.37□□□□□ -0.11
VPS9D1-203ENST00000563798 OR8D4Q8NGM9 314 aa14.37□□□□□ -0.11
VPS9D1-203ENST00000563798 OR11L1Q8NGX0 322 aa14.37□□□□□ -0.11
VPS9D1-203ENST00000563798 SPRYD4Q8WW59 207 aaPredicted RBP14.37□□□□□ -0.11
VPS9D1-203ENST00000563798 OR8B2Q96RD0 313 aa14.37□□□□□ -0.11
VPS9D1-203ENST00000563798 NMNAT2Q9BZQ4 307 aa14.37□□□□□ -0.11
VPS9D1-203ENST00000563798 MAGIXQ9H6Y5 334 aa14.37□□□□□ -0.11
VPS9D1-203ENST00000563798 BAIAP2Q9UQB8 552 aa14.37□□□□□ -0.11
VPS9D1-203ENST00000563798 IGHV3-64DA0A0J9YX35 117 aa14.36□□□□□ -0.11
VPS9D1-203ENST00000563798 TCRBV5S2A0A599 114 aa14.36□□□□□ -0.11
VPS9D1-203ENST00000563798 DNAJC9-AS1A6NH13 148 aa14.36□□□□□ -0.11
VPS9D1-203ENST00000563798 PHYHO14832 338 aa14.36□□□□□ -0.11
VPS9D1-203ENST00000563798 FAM20BO75063 409 aa14.36□□□□□ -0.11
VPS9D1-203ENST00000563798 RNASE1P07998 156 aaKnown RBP14.36□□□□□ -0.11
VPS9D1-203ENST00000563798 ATP6V1B2P21281 511 aa14.36□□□□□ -0.11
VPS9D1-203ENST00000563798 PITPNBP48739 271 aa14.36□□□□□ -0.11
VPS9D1-203ENST00000563798 SLC25A1P53007 311 aa14.36□□□□□ -0.11
VPS9D1-203ENST00000563798 PRSS12P56730 875 aa14.36□□□□□ -0.11
VPS9D1-203ENST00000563798 ZNF92Q03936 586 aa14.36□□□□□ -0.11
VPS9D1-203ENST00000563798 SNAI3Q3KNW1 292 aa14.36□□□□□ -0.11
VPS9D1-203ENST00000563798 FAM201AQ5SY85 155 aa14.36□□□□□ -0.11
VPS9D1-203ENST00000563798 WDR25Q64LD2 544 aaPredicted RBP14.36□□□□□ -0.11
VPS9D1-203ENST00000563798 PARP8Q8N3A8 854 aa14.36□□□□□ -0.11
VPS9D1-203ENST00000563798 ZNF747Q9BV97 191 aa14.36□□□□□ -0.11
VPS9D1-203ENST00000563798 DGCR6LQ9BY27 220 aa14.36□□□□□ -0.11
VPS9D1-203ENST00000563798 MUC13Q9H3R2 512 aa14.36□□□□□ -0.11
VPS9D1-203ENST00000563798 PRDM13Q9H4Q3 707 aa14.36□□□□□ -0.11
VPS9D1-203ENST00000563798 MRPL15Q9P015 296 aaKnown RBP14.36□□□□□ -0.11
VPS9D1-203ENST00000563798 COMMD3-BMI1R4GMX3 469 aa14.36□□□□□ -0.11
VPS9D1-203ENST00000563798 TVP23AA6NH52 213 aa14.35□□□□□ -0.11
VPS9D1-203ENST00000563798 TNFRSF13BO14836 293 aaPredicted RBP14.35□□□□□ -0.11
VPS9D1-203ENST00000563798 CCNB2O95067 398 aa14.35□□□□□ -0.11
VPS9D1-203ENST00000563798 IGHV4-38-2P0DP08 117 aa14.35□□□□□ -0.11
VPS9D1-203ENST00000563798 PSKH1P11801 424 aa14.35□□□□□ -0.11
VPS9D1-203ENST00000563798 MTNR1AP48039 350 aa14.35□□□□□ -0.11
VPS9D1-203ENST00000563798 NPY4RP50391 375 aa14.35□□□□□ -0.11
VPS9D1-203ENST00000563798 BLVRAP53004 296 aa14.35□□□□□ -0.11
VPS9D1-203ENST00000563798 GNGT1P63211 74 aa14.35□□□□□ -0.11
VPS9D1-203ENST00000563798 BAMBIQ13145 260 aa14.35□□□□□ -0.11
VPS9D1-203ENST00000563798 MPPED2Q15777 294 aa14.35□□□□□ -0.11
VPS9D1-203ENST00000563798 LCN8Q6JVE9 175 aa14.35□□□□□ -0.11
VPS9D1-203ENST00000563798 LYPD2Q6UXB3 125 aa14.35□□□□□ -0.11
VPS9D1-203ENST00000563798 CYP2R1Q6VVX0 501 aa14.35□□□□□ -0.11
VPS9D1-203ENST00000563798 DCXRQ7Z4W1 244 aa14.35□□□□□ -0.11
VPS9D1-203ENST00000563798 FITM2Q8N6M3 262 aa14.35□□□□□ -0.11
VPS9D1-203ENST00000563798 SPERTQ8NA61 448 aa14.35□□□□□ -0.11
VPS9D1-203ENST00000563798 SPSB4Q96A44 273 aa14.35□□□□□ -0.11
VPS9D1-203ENST00000563798 KCNJ15Q99712 375 aa14.35□□□□□ -0.11
VPS9D1-203ENST00000563798 MS4A7Q9GZW8 240 aaPredicted RBP14.35□□□□□ -0.11
VPS9D1-203ENST00000563798 OPA3Q9H6K4 179 aa14.35□□□□□ -0.11
VPS9D1-203ENST00000563798 FN3KRPQ9HA64 309 aa14.35□□□□□ -0.11
VPS9D1-203ENST00000563798 RNF7Q9UBF6 113 aa14.35□□□□□ -0.11
VPS9D1-203ENST00000563798 CLN8Q9UBY8 286 aa14.35□□□□□ -0.11
VPS9D1-203ENST00000563798 SPRY1O43609 319 aaPredicted RBP14.34□□□□□ -0.11
VPS9D1-203ENST00000563798 CA6P23280 308 aa14.34□□□□□ -0.11
VPS9D1-203ENST00000563798 ANOS1P23352 680 aa14.34□□□□□ -0.11
VPS9D1-203ENST00000563798 FMO3P31513 532 aa14.34□□□□□ -0.11
VPS9D1-203ENST00000563798 RPS27P42677 84 aaKnown RBP14.34□□□□□ -0.11
VPS9D1-203ENST00000563798 ENTPD1P49961 510 aa14.34□□□□□ -0.11
VPS9D1-203ENST00000563798 BPIFB3P59826 476 aa14.34□□□□□ -0.11
VPS9D1-203ENST00000563798 CRMP1Q14194 572 aa14.34□□□□□ -0.11
VPS9D1-203ENST00000563798 OR8G1Q15617 311 aa14.34□□□□□ -0.11
VPS9D1-203ENST00000563798 KCNJ8Q15842 424 aa14.34□□□□□ -0.11
VPS9D1-203ENST00000563798 MICAQ29983 383 aa14.34□□□□□ -0.11
VPS9D1-203ENST00000563798 GLYATL3Q5SZD4 288 aa14.34□□□□□ -0.11
VPS9D1-203ENST00000563798 PRAMEF6Q5VXH4 476 aa14.34□□□□□ -0.11
VPS9D1-203ENST00000563798 LYPD4Q6UWN0 246 aa14.34□□□□□ -0.11
VPS9D1-203ENST00000563798 CD300LDQ6UXZ3 194 aa14.34□□□□□ -0.11
VPS9D1-203ENST00000563798 AQP11Q8NBQ7 271 aa14.34□□□□□ -0.11
VPS9D1-203ENST00000563798 OR2T33Q8NG76 320 aa14.34□□□□□ -0.11
VPS9D1-203ENST00000563798 NUDT16L1Q9BRJ7 211 aaKnown RBP14.34□□□□□ -0.11
VPS9D1-203ENST00000563798 TSSK6Q9BXA6 273 aa14.34□□□□□ -0.11
VPS9D1-203ENST00000563798 C5orf63A6NC05 138 aa14.33□□□□□ -0.12
VPS9D1-203ENST00000563798 LGALS8O00214 317 aa14.33□□□□□ -0.12
VPS9D1-203ENST00000563798 ZNF593O00488 134 aaPredicted RBP14.33□□□□□ -0.12
VPS9D1-203ENST00000563798 NDUFA2O43678 99 aa14.33□□□□□ -0.12
VPS9D1-203ENST00000563798 SPI1P17947 270 aa14.33□□□□□ -0.12
VPS9D1-203ENST00000563798 DDOSTP39656 456 aa14.33□□□□□ -0.12
VPS9D1-203ENST00000563798 MXRA7P84157 204 aa14.33□□□□□ -0.12
VPS9D1-203ENST00000563798 TRIM25Q14258 630 aaKnown RBP14.33□□□□□ -0.12
VPS9D1-203ENST00000563798 GK3PQ14409 553 aa14.33□□□□□ -0.12
VPS9D1-203ENST00000563798 SLC9A3R2Q15599 337 aa14.33□□□□□ -0.12
VPS9D1-203ENST00000563798 C11orf91Q3C1V1 193 aa14.33□□□□□ -0.12
VPS9D1-203ENST00000563798 OR2T5Q6IEZ7 315 aa14.33□□□□□ -0.12
VPS9D1-203ENST00000563798 SHISA2Q6UWI4 295 aa14.33□□□□□ -0.12
VPS9D1-203ENST00000563798 RHOUQ7L0Q8 258 aa14.33□□□□□ -0.12
VPS9D1-203ENST00000563798 OR51L1Q8NGJ5 315 aa14.33□□□□□ -0.12
VPS9D1-203ENST00000563798 OR9Q1Q8NGQ5 310 aa14.33□□□□□ -0.12
VPS9D1-203ENST00000563798 OR2T29Q8NH02 315 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms