RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 KCNJ15Q99712 375 aa14.17□□□□□ -0.14
CLK3-210ENST00000563112 NIPSNAP1Q9BPW8 284 aa14.17□□□□□ -0.14
CLK3-210ENST00000563112 ZNF556Q9HAH1 456 aa14.17□□□□□ -0.14
CLK3-210ENST00000563112 CMC2Q9NRP2 79 aa14.17□□□□□ -0.14
CLK3-210ENST00000563112 ARHGAP32A7KAX9 2087 aa14.17□□□□□ -0.14
CLK3-210ENST00000563112 A0A1B0GWJ7 208 aa14.16□□□□□ -0.14
CLK3-210ENST00000563112 GGT3PA6NGU5 568 aa14.16□□□□□ -0.14
CLK3-210ENST00000563112 ZNF878C9JN71 531 aa14.16□□□□□ -0.14
CLK3-210ENST00000563112 E2F6O75461 281 aa14.16□□□□□ -0.14
CLK3-210ENST00000563112 CYB5R3P00387 301 aaPredicted RBP14.16□□□□□ -0.14
CLK3-210ENST00000563112 PAICSP22234 425 aaKnown RBP14.16□□□□□ -0.14
CLK3-210ENST00000563112 ZFP36P26651 326 aaKnown RBP14.16□□□□□ -0.14
CLK3-210ENST00000563112 OTX1P32242 354 aaPredicted RBP14.16□□□□□ -0.14
CLK3-210ENST00000563112 PRKXP51817 358 aa14.16□□□□□ -0.14
CLK3-210ENST00000563112 PRSS12P56730 875 aa14.16□□□□□ -0.14
CLK3-210ENST00000563112 OR8G1Q15617 311 aa14.16□□□□□ -0.14
CLK3-210ENST00000563112 PCK2Q16822 640 aa14.16□□□□□ -0.14
CLK3-210ENST00000563112 SPATA24Q86W54 205 aa14.16□□□□□ -0.14
CLK3-210ENST00000563112 JMJD8Q96S16 334 aa14.16□□□□□ -0.14
CLK3-210ENST00000563112 SP140LQ9H930 580 aa14.16□□□□□ -0.14
CLK3-210ENST00000563112 PDP1Q9P0J1 537 aaPredicted RBP14.16□□□□□ -0.14
CLK3-210ENST00000563112 MIOXQ9UGB7 285 aa14.16□□□□□ -0.14
CLK3-210ENST00000563112 IGHV3-64DA0A0J9YX35 117 aa14.15□□□□□ -0.14
CLK3-210ENST00000563112 CD300LBA8K4G0 201 aa14.15□□□□□ -0.14
CLK3-210ENST00000563112 APOC1P02654 83 aa14.15□□□□□ -0.14
CLK3-210ENST00000563112 CLUP10909 449 aa14.15□□□□□ -0.14
CLK3-210ENST00000563112 RPS2P15880 293 aaKnown RBP14.15□□□□□ -0.14
CLK3-210ENST00000563112 ADRA2CP18825 462 aa14.15□□□□□ -0.14
CLK3-210ENST00000563112 POU1F1P28069 291 aa14.15□□□□□ -0.14
CLK3-210ENST00000563112 RBMXP38159 391 aaKnown RBP14.15□□□□□ -0.14
CLK3-210ENST00000563112 GATA4P43694 442 aa14.15□□□□□ -0.14
CLK3-210ENST00000563112 GRB2P62993 217 aaKnown RBP14.15□□□□□ -0.14
CLK3-210ENST00000563112 EIF2B1Q14232 305 aaKnown RBP14.15□□□□□ -0.14
CLK3-210ENST00000563112 FLOT2Q14254 428 aa14.15□□□□□ -0.14
CLK3-210ENST00000563112 SNAI3Q3KNW1 292 aa14.15□□□□□ -0.14
CLK3-210ENST00000563112 ZFAND2BQ8WV99 257 aa14.15□□□□□ -0.14
CLK3-210ENST00000563112 INTS14Q96SY0 518 aa14.15□□□□□ -0.14
CLK3-210ENST00000563112 OPA3Q9H6K4 179 aa14.15□□□□□ -0.14
CLK3-210ENST00000563112 TMEM165Q9HC07 324 aa14.15□□□□□ -0.14
CLK3-210ENST00000563112 OR5V1Q9UGF6 321 aa14.15□□□□□ -0.14
CLK3-210ENST00000563112 LRCH1Q9Y2L9 728 aa14.15□□□□□ -0.14
CLK3-210ENST00000563112 POLR3KQ9Y2Y1 108 aaPredicted RBP14.15□□□□□ -0.14
CLK3-210ENST00000563112 PPIAL4AQ9Y536 164 aa14.15□□□□□ -0.14
CLK3-210ENST00000563112 N6AMT1Q9Y5N5 214 aa14.15□□□□□ -0.14
CLK3-210ENST00000563112 CEACAM18A8MTB9 384 aa14.14□□□□□ -0.15
CLK3-210ENST00000563112 A8MXK9 166 aa14.14□□□□□ -0.15
CLK3-210ENST00000563112 F5H0A9 414 aaPredicted RBP14.14□□□□□ -0.15
CLK3-210ENST00000563112 XRCC2O43543 280 aa14.14□□□□□ -0.15
CLK3-210ENST00000563112 GMDSO60547 372 aa14.14□□□□□ -0.15
CLK3-210ENST00000563112 GLCEO94923 617 aa14.14□□□□□ -0.15
CLK3-210ENST00000563112 ZNF205O95201 554 aa14.14□□□□□ -0.15
CLK3-210ENST00000563112 VENTXO95231 258 aa14.14□□□□□ -0.15
CLK3-210ENST00000563112 FSTL3O95633 263 aa14.14□□□□□ -0.15
CLK3-210ENST00000563112 WNT2P09544 360 aa14.14□□□□□ -0.15
CLK3-210ENST00000563112 CA6P23280 308 aa14.14□□□□□ -0.15
CLK3-210ENST00000563112 FPR2P25090 351 aa14.14□□□□□ -0.15
CLK3-210ENST00000563112 HSD11B1P28845 292 aa14.14□□□□□ -0.15
CLK3-210ENST00000563112 GSTT1P30711 240 aa14.14□□□□□ -0.15
CLK3-210ENST00000563112 CD200P41217 278 aa14.14□□□□□ -0.15
CLK3-210ENST00000563112 ZNF92Q03936 586 aa14.14□□□□□ -0.15
CLK3-210ENST00000563112 GINS1Q14691 196 aa14.14□□□□□ -0.15
CLK3-210ENST00000563112 GLYATL3Q5SZD4 288 aa14.14□□□□□ -0.15
CLK3-210ENST00000563112 USP43Q70EL4 1123 aa14.14□□□□□ -0.15
CLK3-210ENST00000563112 SPATC1Q76KD6 591 aa14.14□□□□□ -0.15
CLK3-210ENST00000563112 SHFQ7M4L6 423 aa14.14□□□□□ -0.15
CLK3-210ENST00000563112 ERI1Q8IV48 349 aaKnown RBP14.14□□□□□ -0.15
CLK3-210ENST00000563112 BPIFB2Q8N4F0 458 aa14.14□□□□□ -0.15
CLK3-210ENST00000563112 IQCF1Q8N6M8 205 aa14.14□□□□□ -0.15
CLK3-210ENST00000563112 OR6N2Q8NGY6 317 aa14.14□□□□□ -0.15
CLK3-210ENST00000563112 OR2AE1Q8NHA4 323 aa14.14□□□□□ -0.15
CLK3-210ENST00000563112 PLEKHA8Q96JA3 519 aa14.14□□□□□ -0.15
CLK3-210ENST00000563112 MRI1Q9BV20 369 aa14.14□□□□□ -0.15
CLK3-210ENST00000563112 SUCNR1Q9BXA5 334 aa14.14□□□□□ -0.15
CLK3-210ENST00000563112 TEX12Q9BXU0 123 aa14.14□□□□□ -0.15
CLK3-210ENST00000563112 TOR3AQ9H497 397 aa14.14□□□□□ -0.15
CLK3-210ENST00000563112 MED20Q9H944 212 aa14.14□□□□□ -0.15
CLK3-210ENST00000563112 MMP26Q9NRE1 261 aa14.14□□□□□ -0.15
CLK3-210ENST00000563112 AUP1Q9Y679 476 aa14.14□□□□□ -0.15
CLK3-210ENST00000563112 FAM183AA6NL82 134 aa14.13□□□□□ -0.15
CLK3-210ENST00000563112 PRR23D1E9PI22 279 aaPredicted RBP14.13□□□□□ -0.15
CLK3-210ENST00000563112 TBX1O43435 398 aa14.13□□□□□ -0.15
CLK3-210ENST00000563112 RGS9O75916 674 aaPredicted RBP14.13□□□□□ -0.15
CLK3-210ENST00000563112 HMGN1P05114 100 aa14.13□□□□□ -0.15
CLK3-210ENST00000563112 PRR23D2P0DMB1 279 aaPredicted RBP14.13□□□□□ -0.15
CLK3-210ENST00000563112 SLC2A1P11166 492 aa14.13□□□□□ -0.15
CLK3-210ENST00000563112 PSKH1P11801 424 aa14.13□□□□□ -0.15
CLK3-210ENST00000563112 ANXA8P13928 327 aa14.13□□□□□ -0.15
CLK3-210ENST00000563112 ZNF12P17014 697 aa14.13□□□□□ -0.15
CLK3-210ENST00000563112 SEC61A1P61619 476 aaKnown RBP14.13□□□□□ -0.15
CLK3-210ENST00000563112 CBX1P83916 185 aa14.13□□□□□ -0.15
CLK3-210ENST00000563112 MZT1Q08AG7 82 aa14.13□□□□□ -0.15
CLK3-210ENST00000563112 ZNF154Q13106 437 aa14.13□□□□□ -0.15
CLK3-210ENST00000563112 MAB21L1Q13394 359 aa14.13□□□□□ -0.15
CLK3-210ENST00000563112 LINC01590Q5TEZ4 76 aa14.13□□□□□ -0.15
CLK3-210ENST00000563112 NLRC3Q7RTR2 1065 aa14.13□□□□□ -0.15
CLK3-210ENST00000563112 DPY19L4Q7Z388 723 aa14.13□□□□□ -0.15
CLK3-210ENST00000563112 TMEM179BQ7Z7N9 219 aa14.13□□□□□ -0.15
CLK3-210ENST00000563112 SPERTQ8NA61 448 aa14.13□□□□□ -0.15
CLK3-210ENST00000563112 Q8TCH9 128 aa14.13□□□□□ -0.15
CLK3-210ENST00000563112 NEIL1Q96FI4 390 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms