RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 MMP15P51511 669 aa8.35□□□□□ -1.07
CLK3-208ENST00000562626 KLF3P57682 345 aaPredicted RBP8.35□□□□□ -1.07
CLK3-208ENST00000562626 NANOS3P60323 173 aaKnown RBP8.35□□□□□ -1.07
CLK3-208ENST00000562626 RPS23P62266 143 aaKnown RBP8.35□□□□□ -1.07
CLK3-208ENST00000562626 EGR3Q06889 387 aa8.35□□□□□ -1.07
CLK3-208ENST00000562626 ZNF718Q3SXZ3 478 aa8.35□□□□□ -1.07
CLK3-208ENST00000562626 CDONQ4KMG0 1287 aa8.35□□□□□ -1.07
CLK3-208ENST00000562626 LIPNQ5VXI9 398 aa8.35□□□□□ -1.07
CLK3-208ENST00000562626 FBXW12Q6X9E4 464 aa8.35□□□□□ -1.07
CLK3-208ENST00000562626 RHOUQ7L0Q8 258 aa8.35□□□□□ -1.07
CLK3-208ENST00000562626 TGIF2LYQ8IUE0 185 aa8.35□□□□□ -1.07
CLK3-208ENST00000562626 OR5AS1Q8N127 324 aa8.35□□□□□ -1.07
CLK3-208ENST00000562626 PRSS35Q8N3Z0 413 aa8.35□□□□□ -1.07
CLK3-208ENST00000562626 RORBQ92753 470 aa8.35□□□□□ -1.07
CLK3-208ENST00000562626 DVL3Q92997 716 aaPredicted RBP8.35□□□□□ -1.07
CLK3-208ENST00000562626 MBD6Q96DN6 1003 aa8.35□□□□□ -1.07
CLK3-208ENST00000562626 VCX3BQ9H321 246 aa8.35□□□□□ -1.07
CLK3-208ENST00000562626 MSL2Q9HCI7 577 aa8.35□□□□□ -1.07
CLK3-208ENST00000562626 FGF20Q9NP95 211 aaPredicted RBP8.35□□□□□ -1.07
CLK3-208ENST00000562626 FAIMQ9NVQ4 179 aa8.35□□□□□ -1.07
CLK3-208ENST00000562626 FKBP14Q9NWM8 211 aa8.35□□□□□ -1.07
CLK3-208ENST00000562626 ERVK13-1Q9NX77 482 aa8.35□□□□□ -1.07
CLK3-208ENST00000562626 PURGQ9UJV8 347 aaKnown RBP8.35□□□□□ -1.07
CLK3-208ENST00000562626 SLC22A13Q9Y226 551 aa8.35□□□□□ -1.07
CLK3-208ENST00000562626 RPL36Q9Y3U8 105 aaKnown RBP8.35□□□□□ -1.07
CLK3-208ENST00000562626 TMEM14AQ9Y6G1 99 aa8.35□□□□□ -1.07
CLK3-208ENST00000562626 TMEM269A0A1B0GVZ9 245 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 A0A1W2PPW3 197 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 DAPL1A0PJW8 107 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 E9PI62 339 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 LYNX1G3V0Z9 82 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 H0YL77 283 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 H3BSH0 61 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 H7C417 338 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 SLC1A7O00341 560 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 MLNRO43193 412 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 LMX1BO60663 402 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 LALBAP00709 142 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 IGLV3-1P01715 115 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 TTRP02766 147 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 LYNX1P0DP58 116 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 PAX1P15863 534 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 KITLGP21583 273 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 ACKR3P25106 362 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 C21orf33P30042 268 aaPredicted RBP8.34□□□□□ -1.07
CLK3-208ENST00000562626 MAGEB1P43366 347 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 KIR3DL2P43630 455 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 RGS6P49758 472 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 RIDAP52758 137 aaKnown RBP8.34□□□□□ -1.07
CLK3-208ENST00000562626 SNRPD2P62316 118 aaKnown RBP8.34□□□□□ -1.07
CLK3-208ENST00000562626 FAM3AP98173 230 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 RAB40BQ12829 278 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 SNCBQ16143 134 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 GFOD2Q3B7J2 385 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 C6orf141Q5SZD1 244 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 OR2G6Q5TZ20 316 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 XAF1Q6GPH4 301 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 KCTD18Q6PI47 426 aaPredicted RBP8.34□□□□□ -1.07
CLK3-208ENST00000562626 DEGS2Q6QHC5 323 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 AHSA2Q719I0 299 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 CATSPERDQ86XM0 798 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.34□□□□□ -1.07
CLK3-208ENST00000562626 ACBD7Q8N6N7 88 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 YIPF7Q8N8F6 280 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 BHLHE23Q8NDY6 225 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 BPIFB6Q8NFQ5 453 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 ASB17Q8WXJ9 295 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 NINJ1Q92982 152 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 PIGTQ969N2 578 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 SPSB4Q96A44 273 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 HAVCR1Q96D42 359 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 PELI1Q96FA3 418 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 PGAM5Q96HS1 289 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 C4orf36Q96KX1 117 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 CNBD2Q96M20 576 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 SIGLEC11Q96RL6 698 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 MNTQ99583 582 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 ZNF184Q99676 751 aaPredicted RBP8.34□□□□□ -1.07
CLK3-208ENST00000562626 VRK1Q99986 396 aaPredicted RBP8.34□□□□□ -1.07
CLK3-208ENST00000562626 ALG8Q9BVK2 526 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 REPIN1Q9BWE0 567 aaKnown RBP8.34□□□□□ -1.07
CLK3-208ENST00000562626 MROQ9BYG7 248 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 PBOV1Q9GZY1 135 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 PLCXD1Q9NUJ7 323 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 BEX4Q9NWD9 120 aaPredicted RBP8.34□□□□□ -1.07
CLK3-208ENST00000562626 PSORS1C1Q9UIG5 152 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 GNG8Q9UK08 70 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 ITGB1BP2Q9UKP3 347 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 RAB26Q9ULW5 256 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 R4GMQ9 66 aa8.34□□□□□ -1.07
CLK3-208ENST00000562626 FLNAP21333 2647 aaKnown RBP8.34□□□□□ -1.07
CLK3-208ENST00000562626 A0A1B0GTI1 187 aa8.33□□□□□ -1.08
CLK3-208ENST00000562626 hCG_38984A0A1B0GV85 526 aa8.33□□□□□ -1.08
CLK3-208ENST00000562626 METTL15A6NJ78 407 aa8.33□□□□□ -1.08
CLK3-208ENST00000562626 J3QLW9 94 aa8.33□□□□□ -1.08
CLK3-208ENST00000562626 J3QW42 95 aa8.33□□□□□ -1.08
CLK3-208ENST00000562626 M0R233 179 aa8.33□□□□□ -1.08
CLK3-208ENST00000562626 PHYHO14832 338 aa8.33□□□□□ -1.08
CLK3-208ENST00000562626 ZNF254O75437 659 aa8.33□□□□□ -1.08
CLK3-208ENST00000562626 IGHV1-46P01743 117 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms