RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 ZAR1LA6NP61 321 aa13.66□□□□□ -0.22
COMMD4-206ENST00000562610 LMX1BO60663 402 aa13.66□□□□□ -0.22
COMMD4-206ENST00000562610 CRLF1O75462 422 aa13.66□□□□□ -0.22
COMMD4-206ENST00000562610 ZNF92Q03936 586 aa13.66□□□□□ -0.22
COMMD4-206ENST00000562610 SLC3A1Q07837 685 aa13.66□□□□□ -0.22
COMMD4-206ENST00000562610 HNRNPA0Q13151 305 aaKnown RBP13.66□□□□□ -0.22
COMMD4-206ENST00000562610 ZNF771Q7L3S4 317 aaPredicted RBP13.66□□□□□ -0.22
COMMD4-206ENST00000562610 PEG10Q86TG7 708 aaKnown RBP13.66□□□□□ -0.22
COMMD4-206ENST00000562610 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.66□□□□□ -0.22
COMMD4-206ENST00000562610 TCEANCQ8N8B7 351 aa13.66□□□□□ -0.22
COMMD4-206ENST00000562610 ZNF454Q8N9F8 522 aa13.66□□□□□ -0.22
COMMD4-206ENST00000562610 SPRYD4Q8WW59 207 aaPredicted RBP13.66□□□□□ -0.22
COMMD4-206ENST00000562610 RBM4BQ9BQ04 359 aaKnown RBP13.66□□□□□ -0.22
COMMD4-206ENST00000562610 SLC30A2Q9BRI3 323 aa13.66□□□□□ -0.22
COMMD4-206ENST00000562610 TMEFF2Q9UIK5 374 aaPredicted RBP13.66□□□□□ -0.22
COMMD4-206ENST00000562610 LAMP5Q9UJQ1 280 aa13.66□□□□□ -0.22
COMMD4-206ENST00000562610 PPP1R3CQ9UQK1 317 aa13.66□□□□□ -0.22
COMMD4-206ENST00000562610 NAV3Q8IVL0 2385 aa13.66□□□□□ -0.22
COMMD4-206ENST00000562610 C5orf63A6NC05 138 aa13.65□□□□□ -0.22
COMMD4-206ENST00000562610 CCDC182A6NF36 153 aa13.65□□□□□ -0.22
COMMD4-206ENST00000562610 GGT3PA6NGU5 568 aa13.65□□□□□ -0.22
COMMD4-206ENST00000562610 F5H5P2 479 aa13.65□□□□□ -0.22
COMMD4-206ENST00000562610 H0YL77 283 aa13.65□□□□□ -0.22
COMMD4-206ENST00000562610 H3BNX3 289 aa13.65□□□□□ -0.22
COMMD4-206ENST00000562610 MLNRO43193 412 aa13.65□□□□□ -0.22
COMMD4-206ENST00000562610 XRCC2O43543 280 aa13.65□□□□□ -0.22
COMMD4-206ENST00000562610 APOC1P02654 83 aa13.65□□□□□ -0.22
COMMD4-206ENST00000562610 HLA-DPB1P04440 258 aa13.65□□□□□ -0.22
COMMD4-206ENST00000562610 OPRL1P41146 370 aa13.65□□□□□ -0.22
COMMD4-206ENST00000562610 RAD23AP54725 363 aa13.65□□□□□ -0.22
COMMD4-206ENST00000562610 CDH15P55291 814 aa13.65□□□□□ -0.22
COMMD4-206ENST00000562610 TIGD6Q17RP2 521 aa13.65□□□□□ -0.22
COMMD4-206ENST00000562610 GFOD2Q3B7J2 385 aa13.65□□□□□ -0.22
COMMD4-206ENST00000562610 CHRFAM7AQ494W8 412 aa13.65□□□□□ -0.22
COMMD4-206ENST00000562610 C12orf73Q69YU5 71 aa13.65□□□□□ -0.22
COMMD4-206ENST00000562610 FAM57BQ71RH2 274 aa13.65□□□□□ -0.22
COMMD4-206ENST00000562610 SLC16A9Q7RTY1 509 aa13.65□□□□□ -0.22
COMMD4-206ENST00000562610 LINC01356Q8N9X3 169 aa13.65□□□□□ -0.22
COMMD4-206ENST00000562610 IL4I1Q96RQ9 567 aa13.65□□□□□ -0.22
COMMD4-206ENST00000562610 GAL3ST1Q99999 423 aa13.65□□□□□ -0.22
COMMD4-206ENST00000562610 OSBPL10Q9BXB5 764 aa13.65□□□□□ -0.22
COMMD4-206ENST00000562610 LPAR2Q9HBW0 351 aa13.65□□□□□ -0.22
COMMD4-206ENST00000562610 BRD7Q9NPI1 651 aa13.65□□□□□ -0.22
COMMD4-206ENST00000562610 TMEM106BQ9NUM4 274 aa13.65□□□□□ -0.22
COMMD4-206ENST00000562610 TMEM100Q9NV29 134 aa13.65□□□□□ -0.22
COMMD4-206ENST00000562610 DCAF16Q9NXF7 216 aa13.65□□□□□ -0.22
COMMD4-206ENST00000562610 KLHDC2Q9Y2U9 406 aa13.65□□□□□ -0.22
COMMD4-206ENST00000562610 IGHV3-64DA0A0J9YX35 117 aa13.64□□□□□ -0.23
COMMD4-206ENST00000562610 SRP9P49458 86 aaKnown RBP13.64□□□□□ -0.23
COMMD4-206ENST00000562610 ZNF121P58317 390 aaPredicted RBP13.64□□□□□ -0.23
COMMD4-206ENST00000562610 LRRN1Q6UXK5 716 aa13.64□□□□□ -0.23
COMMD4-206ENST00000562610 BCDIN3DQ7Z5W3 292 aaKnown RBP13.64□□□□□ -0.23
COMMD4-206ENST00000562610 C10orf67Q8IYJ2 551 aa13.64□□□□□ -0.23
COMMD4-206ENST00000562610 TMEM163Q8TC26 289 aa13.64□□□□□ -0.23
COMMD4-206ENST00000562610 RAB39BQ96DA2 213 aa13.64□□□□□ -0.23
COMMD4-206ENST00000562610 PGAM5Q96HS1 289 aa13.64□□□□□ -0.23
COMMD4-206ENST00000562610 MEGF10Q96KG7 1140 aa13.64□□□□□ -0.23
COMMD4-206ENST00000562610 CNN2Q99439 309 aaKnown RBP13.64□□□□□ -0.23
COMMD4-206ENST00000562610 TEAD3Q99594 435 aa13.64□□□□□ -0.23
COMMD4-206ENST00000562610 GABARAPL3Q9BY60 117 aa13.64□□□□□ -0.23
COMMD4-206ENST00000562610 TTTY10Q9BZA0 68 aa13.64□□□□□ -0.23
COMMD4-206ENST00000562610 SHARPINQ9H0F6 387 aa13.64□□□□□ -0.23
COMMD4-206ENST00000562610 OPA3Q9H6K4 179 aa13.64□□□□□ -0.23
COMMD4-206ENST00000562610 SP140LQ9H930 580 aa13.64□□□□□ -0.23
COMMD4-206ENST00000562610 H2AFY2Q9P0M6 372 aaPredicted RBP13.64□□□□□ -0.23
COMMD4-206ENST00000562610 ORC6Q9Y5N6 252 aa13.64□□□□□ -0.23
COMMD4-206ENST00000562610 CD300LBA8K4G0 201 aa13.63□□□□□ -0.23
COMMD4-206ENST00000562610 FAM157AC9JC47 383 aa13.63□□□□□ -0.23
COMMD4-206ENST00000562610 EI24O14681 340 aa13.63□□□□□ -0.23
COMMD4-206ENST00000562610 CA6P23280 308 aa13.63□□□□□ -0.23
COMMD4-206ENST00000562610 RBMXP38159 391 aaKnown RBP13.63□□□□□ -0.23
COMMD4-206ENST00000562610 MMP16P51512 607 aa13.63□□□□□ -0.23
COMMD4-206ENST00000562610 HCCSP53701 268 aa13.63□□□□□ -0.23
COMMD4-206ENST00000562610 OR8G1Q15617 311 aa13.63□□□□□ -0.23
COMMD4-206ENST00000562610 NXNL2Q5VZ03 156 aa13.63□□□□□ -0.23
COMMD4-206ENST00000562610 IL17RELQ6ZVW7 336 aa13.63□□□□□ -0.23
COMMD4-206ENST00000562610 RHOUQ7L0Q8 258 aa13.63□□□□□ -0.23
COMMD4-206ENST00000562610 KRT77Q7Z794 578 aa13.63□□□□□ -0.23
COMMD4-206ENST00000562610 OR56B2PQ8NGI1 322 aa13.63□□□□□ -0.23
COMMD4-206ENST00000562610 OR52H1Q8NGJ2 320 aa13.63□□□□□ -0.23
COMMD4-206ENST00000562610 ZNF420Q8TAQ5 688 aaPredicted RBP13.63□□□□□ -0.23
COMMD4-206ENST00000562610 REEP6Q96HR9 211 aa13.63□□□□□ -0.23
COMMD4-206ENST00000562610 ADAT1Q9BUB4 502 aaKnown RBP13.63□□□□□ -0.23
COMMD4-206ENST00000562610 REPIN1Q9BWE0 567 aaKnown RBP13.63□□□□□ -0.23
COMMD4-206ENST00000562610 YIPF3Q9GZM5 350 aa13.63□□□□□ -0.23
COMMD4-206ENST00000562610 ZNF665Q9H7R5 613 aa13.63□□□□□ -0.23
COMMD4-206ENST00000562610 GCM1Q9NP62 436 aa13.63□□□□□ -0.23
COMMD4-206ENST00000562610 TMEM160Q9NX00 188 aa13.63□□□□□ -0.23
COMMD4-206ENST00000562610 UBAP1Q9NZ09 502 aa13.63□□□□□ -0.23
COMMD4-206ENST00000562610 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.63□□□□□ -0.23
COMMD4-206ENST00000562610 CDC42EP3Q9UKI2 254 aa13.63□□□□□ -0.23
COMMD4-206ENST00000562610 LRP12Q9Y561 859 aa13.63□□□□□ -0.23
COMMD4-206ENST00000562610 NPTNQ9Y639 398 aa13.63□□□□□ -0.23
COMMD4-206ENST00000562610 SLC22A31A6NKX4 558 aa13.62□□□□□ -0.23
COMMD4-206ENST00000562610 B4DSR2 109 aa13.62□□□□□ -0.23
COMMD4-206ENST00000562610 HNF1AP20823 631 aa13.62□□□□□ -0.23
COMMD4-206ENST00000562610 POLR2IP36954 125 aaKnown RBP13.62□□□□□ -0.23
COMMD4-206ENST00000562610 PSMA6P60900 246 aaKnown RBP13.62□□□□□ -0.23
COMMD4-206ENST00000562610 LMO4P61968 165 aa13.62□□□□□ -0.23
COMMD4-206ENST00000562610 KCTD18Q6PI47 426 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms