RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 FGD2Q7Z6J4 655 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 DTX3Q8N9I9 347 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 OR51D1Q8NGF3 324 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 OR6M1Q8NGM8 313 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 SYNPRQ8TBG9 265 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 FAM3DQ96BQ1 224 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 S100A16Q96FQ6 103 aaKnown RBP11.08□□□□□ -0.64
USP3-213ENST00000559711 FAM71F1Q96KD3 344 aaPredicted RBP11.08□□□□□ -0.64
USP3-213ENST00000559711 OR10A2Q9H208 303 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 TMEM138Q9NPI0 162 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 RHBDD3Q9Y3P4 386 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 V9GYS6 101 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 DCHS1Q96JQ0 3298 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 LOC100289279A0A1B0GTE1 492 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 AHRRA9YTQ3 701 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 K7ENP7 123 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 SPNP16150 400 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 ABOP16442 354 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 ZNF20P17024 532 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 RAB3AP20336 220 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 HTR2CP28335 458 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 MPGP29372 298 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 GNALP38405 381 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 MNDAP41218 407 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 HTR5AP47898 357 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 RFX2P48378 723 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 HGFACQ04756 655 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 TAB1Q15750 504 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 GLYATL3Q5SZD4 288 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 INO80CQ6PI98 192 aaPredicted RBP11.08□□□□□ -0.64
USP3-213ENST00000559711 COMMD2Q86X83 199 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 CDH26Q8IXH8 852 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 UBE2J2Q8N2K1 259 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 C19orf18Q8NEA5 215 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 WNT2BQ93097 391 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 TRIM63Q969Q1 353 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 SGK3Q96BR1 496 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 THAP7Q9BT49 309 aaPredicted RBP11.08□□□□□ -0.64
USP3-213ENST00000559711 RHBDL2Q9NX52 303 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 PRSS50Q9UI38 385 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 LHX6Q9UPM6 363 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 APC2O95996 2303 aa11.07□□□□□ -0.64
USP3-213ENST00000559711 A0A096LPE4 126 aa11.07□□□□□ -0.64
USP3-213ENST00000559711 A0A1W2PPZ6 126 aa11.07□□□□□ -0.64
USP3-213ENST00000559711 DLL1O00548 723 aa11.07□□□□□ -0.64
USP3-213ENST00000559711 SULT1B1O43704 296 aa11.07□□□□□ -0.64
USP3-213ENST00000559711 GSTZ1O43708 216 aaPredicted RBP11.07□□□□□ -0.64
USP3-213ENST00000559711 DHRS3O75911 302 aa11.07□□□□□ -0.64
USP3-213ENST00000559711 ERCC1P07992 297 aaPredicted RBP11.07□□□□□ -0.64
USP3-213ENST00000559711 COX5BP10606 129 aa11.07□□□□□ -0.64
USP3-213ENST00000559711 POU3F4P49335 361 aa11.07□□□□□ -0.64
USP3-213ENST00000559711 CAPZA1P52907 286 aa11.07□□□□□ -0.64
USP3-213ENST00000559711 SNAI3Q3KNW1 292 aa11.07□□□□□ -0.64
USP3-213ENST00000559711 PLEKHN1Q494U1 663 aaPredicted RBP11.07□□□□□ -0.64
USP3-213ENST00000559711 PABPC1L2AQ5JQF8 200 aa11.07□□□□□ -0.64
USP3-213ENST00000559711 SFRP5Q5T4F7 317 aa11.07□□□□□ -0.64
USP3-213ENST00000559711 C9orf135Q5VTT2 229 aa11.07□□□□□ -0.64
USP3-213ENST00000559711 HACD4Q5VWC8 232 aa11.07□□□□□ -0.64
USP3-213ENST00000559711 CCBE1Q6UXH8 406 aaPredicted RBP11.07□□□□□ -0.64
USP3-213ENST00000559711 FAM214BQ7L5A3 538 aa11.07□□□□□ -0.64
USP3-213ENST00000559711 NRARPQ7Z6K4 114 aa11.07□□□□□ -0.64
USP3-213ENST00000559711 CPEB3Q8NE35 698 aaKnown RBP11.07□□□□□ -0.64
USP3-213ENST00000559711 RFT1Q96AA3 541 aa11.07□□□□□ -0.64
USP3-213ENST00000559711 C10orf35Q96D05 121 aa11.07□□□□□ -0.64
USP3-213ENST00000559711 SORCS2Q96PQ0 1159 aa11.07□□□□□ -0.64
USP3-213ENST00000559711 TRIB1Q96RU8 372 aa11.07□□□□□ -0.64
USP3-213ENST00000559711 UQCC2Q9BRT2 126 aa11.07□□□□□ -0.64
USP3-213ENST00000559711 C11orf54Q9H0W9 315 aaPredicted RBP11.07□□□□□ -0.64
USP3-213ENST00000559711 C12orf49Q9H741 205 aa11.07□□□□□ -0.64
USP3-213ENST00000559711 CGGBP1Q9UFW8 167 aaPredicted RBP11.07□□□□□ -0.64
USP3-213ENST00000559711 ZNF391Q9UJN7 358 aa11.07□□□□□ -0.64
USP3-213ENST00000559711 PRRC2CQ9Y520 2896 aaKnown RBP11.06□□□□□ -0.64
USP3-213ENST00000559711 FUOMA2VDF0 154 aa11.06□□□□□ -0.64
USP3-213ENST00000559711 DHRS7CA6NNS2 312 aa11.06□□□□□ -0.64
USP3-213ENST00000559711 LDLRAD4O15165 306 aa11.06□□□□□ -0.64
USP3-213ENST00000559711 LANCL1O43813 399 aa11.06□□□□□ -0.64
USP3-213ENST00000559711 MTRF1O75570 445 aaKnown RBP11.06□□□□□ -0.64
USP3-213ENST00000559711 ALX3O95076 343 aa11.06□□□□□ -0.64
USP3-213ENST00000559711 IL18BPO95998 194 aa11.06□□□□□ -0.64
USP3-213ENST00000559711 CRYABP02511 175 aaKnown RBP11.06□□□□□ -0.64
USP3-213ENST00000559711 ALDOBP05062 364 aa11.06□□□□□ -0.64
USP3-213ENST00000559711 PTH2RP49190 550 aa11.06□□□□□ -0.64
USP3-213ENST00000559711 PLA2G7Q13093 441 aa11.06□□□□□ -0.64
USP3-213ENST00000559711 GFOD2Q3B7J2 385 aa11.06□□□□□ -0.64
USP3-213ENST00000559711 ANKRD16Q6P6B7 361 aa11.06□□□□□ -0.64
USP3-213ENST00000559711 DPPA2Q7Z7J5 298 aa11.06□□□□□ -0.64
USP3-213ENST00000559711 OR5AS1Q8N127 324 aa11.06□□□□□ -0.64
USP3-213ENST00000559711 JAGN1Q8N5M9 183 aa11.06□□□□□ -0.64
USP3-213ENST00000559711 OR52N4Q8NGI2 321 aa11.06□□□□□ -0.64
USP3-213ENST00000559711 OR5M9Q8NGP3 310 aa11.06□□□□□ -0.64
USP3-213ENST00000559711 OR13C9Q8NGT0 318 aa11.06□□□□□ -0.64
USP3-213ENST00000559711 SLC22A4Q9H015 551 aa11.06□□□□□ -0.64
USP3-213ENST00000559711 METTL17Q9H7H0 456 aaPredicted RBP11.06□□□□□ -0.64
USP3-213ENST00000559711 RNF121Q9H920 327 aa11.06□□□□□ -0.64
USP3-213ENST00000559711 MRPS7Q9Y2R9 242 aaKnown RBP11.06□□□□□ -0.64
USP3-213ENST00000559711 URB1O60287 2271 aaKnown RBP11.05□□□□□ -0.64
USP3-213ENST00000559711 TMEM272A0A1B0GTI8 110 aa11.05□□□□□ -0.64
USP3-213ENST00000559711 LINC00854A0A1B0GVQ3 168 aa11.05□□□□□ -0.64
USP3-213ENST00000559711 ZNHIT1O43257 154 aa11.05□□□□□ -0.64
USP3-213ENST00000559711 XRCC3O43542 346 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms