RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 C1orf87Q8N0U7 546 aa12.65□□□□□ -0.38
SMAD6-203ENST00000558937 ZNF511Q8NB15 262 aa12.65□□□□□ -0.38
SMAD6-203ENST00000558937 OR2T33Q8NG76 320 aa12.65□□□□□ -0.38
SMAD6-203ENST00000558937 OR10G2Q8NGC3 310 aa12.65□□□□□ -0.38
SMAD6-203ENST00000558937 OR2AE1Q8NHA4 323 aa12.65□□□□□ -0.38
SMAD6-203ENST00000558937 FAM216AQ8WUB2 273 aa12.65□□□□□ -0.38
SMAD6-203ENST00000558937 DVL3Q92997 716 aaPredicted RBP12.65□□□□□ -0.38
SMAD6-203ENST00000558937 CCDC124Q96CT7 223 aaKnown RBP12.65□□□□□ -0.38
SMAD6-203ENST00000558937 CLPTM1LQ96KA5 538 aa12.65□□□□□ -0.38
SMAD6-203ENST00000558937 COPS4Q9BT78 406 aa12.65□□□□□ -0.38
SMAD6-203ENST00000558937 ESM1Q9NQ30 184 aa12.65□□□□□ -0.38
SMAD6-203ENST00000558937 AUP1Q9Y679 476 aa12.65□□□□□ -0.38
SMAD6-203ENST00000558937 DOCK11Q5JSL3 2073 aa12.65□□□□□ -0.39
SMAD6-203ENST00000558937 CD300LBA8K4G0 201 aa12.64□□□□□ -0.39
SMAD6-203ENST00000558937 FAM20BO75063 409 aa12.64□□□□□ -0.39
SMAD6-203ENST00000558937 FAM107AO95990 144 aa12.64□□□□□ -0.39
SMAD6-203ENST00000558937 IFNGP01579 166 aa12.64□□□□□ -0.39
SMAD6-203ENST00000558937 FPR2P25090 351 aa12.64□□□□□ -0.39
SMAD6-203ENST00000558937 PRKXP51817 358 aa12.64□□□□□ -0.39
SMAD6-203ENST00000558937 ZNF92Q03936 586 aa12.64□□□□□ -0.39
SMAD6-203ENST00000558937 PCK2Q16822 640 aa12.64□□□□□ -0.39
SMAD6-203ENST00000558937 ZNF404Q494X3 552 aa12.64□□□□□ -0.39
SMAD6-203ENST00000558937 KLF17Q5JT82 389 aaPredicted RBP12.64□□□□□ -0.39
SMAD6-203ENST00000558937 DRAM2Q6UX65 266 aa12.64□□□□□ -0.39
SMAD6-203ENST00000558937 CELF2-AS1Q8N7Q2 184 aa12.64□□□□□ -0.39
SMAD6-203ENST00000558937 ZDHHC22Q8N966 263 aa12.64□□□□□ -0.39
SMAD6-203ENST00000558937 OR6K6Q8NGW6 343 aa12.64□□□□□ -0.39
SMAD6-203ENST00000558937 Q8TCH9 128 aa12.64□□□□□ -0.39
SMAD6-203ENST00000558937 SLAMF6Q96DU3 332 aa12.64□□□□□ -0.39
SMAD6-203ENST00000558937 ASB9Q96DX5 294 aa12.64□□□□□ -0.39
SMAD6-203ENST00000558937 NEIL1Q96FI4 390 aaPredicted RBP12.64□□□□□ -0.39
SMAD6-203ENST00000558937 NIPSNAP1Q9BPW8 284 aa12.64□□□□□ -0.39
SMAD6-203ENST00000558937 ADAT1Q9BUB4 502 aaKnown RBP12.64□□□□□ -0.39
SMAD6-203ENST00000558937 MRI1Q9BV20 369 aa12.64□□□□□ -0.39
SMAD6-203ENST00000558937 SSBP3Q9BWW4 388 aaPredicted RBP12.64□□□□□ -0.39
SMAD6-203ENST00000558937 UFSP2Q9NUQ7 469 aa12.64□□□□□ -0.39
SMAD6-203ENST00000558937 MIOXQ9UGB7 285 aa12.64□□□□□ -0.39
SMAD6-203ENST00000558937 PPIAL4AQ9Y536 164 aa12.64□□□□□ -0.39
SMAD6-203ENST00000558937 ANK2Q01484 3957 aa12.63□□□□□ -0.39
SMAD6-203ENST00000558937 GGT3PA6NGU5 568 aa12.63□□□□□ -0.39
SMAD6-203ENST00000558937 RIIAD1A6NNX1 92 aa12.63□□□□□ -0.39
SMAD6-203ENST00000558937 FSTL3O95633 263 aa12.63□□□□□ -0.39
SMAD6-203ENST00000558937 RAP2AP10114 183 aa12.63□□□□□ -0.39
SMAD6-203ENST00000558937 SLC2A1P11166 492 aa12.63□□□□□ -0.39
SMAD6-203ENST00000558937 IRF2P14316 349 aa12.63□□□□□ -0.39
SMAD6-203ENST00000558937 CA6P23280 308 aa12.63□□□□□ -0.39
SMAD6-203ENST00000558937 CPT2P23786 658 aa12.63□□□□□ -0.39
SMAD6-203ENST00000558937 GNB2P62879 340 aa12.63□□□□□ -0.39
SMAD6-203ENST00000558937 PAX2Q02962 417 aa12.63□□□□□ -0.39
SMAD6-203ENST00000558937 TAF13Q15543 124 aa12.63□□□□□ -0.39
SMAD6-203ENST00000558937 OR8G1Q15617 311 aa12.63□□□□□ -0.39
SMAD6-203ENST00000558937 MPPED2Q15777 294 aa12.63□□□□□ -0.39
SMAD6-203ENST00000558937 TUSC1Q2TAM9 212 aa12.63□□□□□ -0.39
SMAD6-203ENST00000558937 TEX30Q5JUR7 227 aa12.63□□□□□ -0.39
SMAD6-203ENST00000558937 LINC01590Q5TEZ4 76 aa12.63□□□□□ -0.39
SMAD6-203ENST00000558937 SPATC1Q76KD6 591 aa12.63□□□□□ -0.39
SMAD6-203ENST00000558937 ADGRG5Q8IZF4 528 aa12.63□□□□□ -0.39
SMAD6-203ENST00000558937 IQCF1Q8N6M8 205 aa12.63□□□□□ -0.39
SMAD6-203ENST00000558937 OR8B3Q8NGG8 313 aa12.63□□□□□ -0.39
SMAD6-203ENST00000558937 OR11L1Q8NGX0 322 aa12.63□□□□□ -0.39
SMAD6-203ENST00000558937 TEX47Q8TBZ9 253 aa12.63□□□□□ -0.39
SMAD6-203ENST00000558937 ERGIC1Q969X5 290 aa12.63□□□□□ -0.39
SMAD6-203ENST00000558937 LRGUKQ96M69 825 aa12.63□□□□□ -0.39
SMAD6-203ENST00000558937 OR8B2Q96RD0 313 aa12.63□□□□□ -0.39
SMAD6-203ENST00000558937 KCNJ15Q99712 375 aa12.63□□□□□ -0.39
SMAD6-203ENST00000558937 SLC22A4Q9H015 551 aa12.63□□□□□ -0.39
SMAD6-203ENST00000558937 CMC2Q9NRP2 79 aa12.63□□□□□ -0.39
SMAD6-203ENST00000558937 CENPMQ9NSP4 180 aa12.63□□□□□ -0.39
SMAD6-203ENST00000558937 TAS2R1Q9NYW7 299 aa12.63□□□□□ -0.39
SMAD6-203ENST00000558937 ZNF69Q9UC07 566 aa12.63□□□□□ -0.39
SMAD6-203ENST00000558937 NUP50Q9UKX7 468 aa12.63□□□□□ -0.39
SMAD6-203ENST00000558937 NOP16Q9Y3C1 178 aaKnown RBP12.63□□□□□ -0.39
SMAD6-203ENST00000558937 IGHV2-70DA0A0C4DH43 119 aa12.62□□□□□ -0.39
SMAD6-203ENST00000558937 TMEM89A2RUT3 159 aa12.62□□□□□ -0.39
SMAD6-203ENST00000558937 ZNF878C9JN71 531 aa12.62□□□□□ -0.39
SMAD6-203ENST00000558937 ZNF593O00488 134 aaPredicted RBP12.62□□□□□ -0.39
SMAD6-203ENST00000558937 ACOT8O14734 319 aa12.62□□□□□ -0.39
SMAD6-203ENST00000558937 ZNF3P17036 446 aa12.62□□□□□ -0.39
SMAD6-203ENST00000558937 CFPP27918 469 aa12.62□□□□□ -0.39
SMAD6-203ENST00000558937 CD80P33681 288 aa12.62□□□□□ -0.39
SMAD6-203ENST00000558937 GRK5P34947 590 aa12.62□□□□□ -0.39
SMAD6-203ENST00000558937 PITPNBP48739 271 aa12.62□□□□□ -0.39
SMAD6-203ENST00000558937 UBA52P62987 128 aaKnown RBP12.62□□□□□ -0.39
SMAD6-203ENST00000558937 HOXA4Q00056 320 aaPredicted RBP12.62□□□□□ -0.39
SMAD6-203ENST00000558937 PAX8Q06710 450 aa12.62□□□□□ -0.39
SMAD6-203ENST00000558937 GK3PQ14409 553 aa12.62□□□□□ -0.39
SMAD6-203ENST00000558937 CD300LDQ6UXZ3 194 aa12.62□□□□□ -0.39
SMAD6-203ENST00000558937 SIGLECL1Q8N7X8 197 aa12.62□□□□□ -0.39
SMAD6-203ENST00000558937 C19orf18Q8NEA5 215 aa12.62□□□□□ -0.39
SMAD6-203ENST00000558937 OR56B2PQ8NGI1 322 aa12.62□□□□□ -0.39
SMAD6-203ENST00000558937 GIPC3Q8TF64 312 aa12.62□□□□□ -0.39
SMAD6-203ENST00000558937 GCDHQ92947 438 aaPredicted RBP12.62□□□□□ -0.39
SMAD6-203ENST00000558937 DACT3Q96B18 629 aaPredicted RBP12.62□□□□□ -0.39
SMAD6-203ENST00000558937 PLEKHA8Q96JA3 519 aa12.62□□□□□ -0.39
SMAD6-203ENST00000558937 FEVQ99581 238 aa12.62□□□□□ -0.39
SMAD6-203ENST00000558937 CHID1Q9BWS9 393 aa12.62□□□□□ -0.39
SMAD6-203ENST00000558937 MED20Q9H944 212 aa12.62□□□□□ -0.39
SMAD6-203ENST00000558937 N6AMT1Q9Y5N5 214 aa12.62□□□□□ -0.39
SMAD6-203ENST00000558937 DHRS12A0PJE2 317 aa12.61□□□□□ -0.39
SMAD6-203ENST00000558937 ARRDC5A6NEK1 342 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms