RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 TRAPPC2LH3BP13 241 aa14.26□□□□□ -0.13
LRRC28-210ENST00000558879 PTBP3O95758 552 aaKnown RBP14.26□□□□□ -0.13
LRRC28-210ENST00000558879 CYB5R3P00387 301 aaPredicted RBP14.26□□□□□ -0.13
LRRC28-210ENST00000558879 SPARCP09486 303 aa14.26□□□□□ -0.13
LRRC28-210ENST00000558879 ZNF3P17036 446 aa14.26□□□□□ -0.13
LRRC28-210ENST00000558879 CPT2P23786 658 aa14.26□□□□□ -0.13
LRRC28-210ENST00000558879 GRK5P34947 590 aa14.26□□□□□ -0.13
LRRC28-210ENST00000558879 PMELP40967 661 aa14.26□□□□□ -0.13
LRRC28-210ENST00000558879 PAX2Q02962 417 aa14.26□□□□□ -0.13
LRRC28-210ENST00000558879 ZNF92Q03936 586 aa14.26□□□□□ -0.13
LRRC28-210ENST00000558879 ZNF404Q494X3 552 aa14.26□□□□□ -0.13
LRRC28-210ENST00000558879 TMEM179BQ7Z7N9 219 aa14.26□□□□□ -0.13
LRRC28-210ENST00000558879 MOGAT3Q86VF5 341 aa14.26□□□□□ -0.13
LRRC28-210ENST00000558879 OR2AE1Q8NHA4 323 aa14.26□□□□□ -0.13
LRRC28-210ENST00000558879 TEX47Q8TBZ9 253 aa14.26□□□□□ -0.13
LRRC28-210ENST00000558879 ZNF418Q8TF45 676 aaPredicted RBP14.26□□□□□ -0.13
LRRC28-210ENST00000558879 GIPC3Q8TF64 312 aa14.26□□□□□ -0.13
LRRC28-210ENST00000558879 CANT1Q8WVQ1 401 aa14.26□□□□□ -0.13
LRRC28-210ENST00000558879 SLAMF6Q96DU3 332 aa14.26□□□□□ -0.13
LRRC28-210ENST00000558879 FEVQ99581 238 aa14.26□□□□□ -0.13
LRRC28-210ENST00000558879 KCNJ15Q99712 375 aa14.26□□□□□ -0.13
LRRC28-210ENST00000558879 THTPAQ9BU02 230 aa14.26□□□□□ -0.13
LRRC28-210ENST00000558879 CHID1Q9BWS9 393 aa14.26□□□□□ -0.13
LRRC28-210ENST00000558879 MARCH7Q9H992 704 aa14.26□□□□□ -0.13
LRRC28-210ENST00000558879 TMEM165Q9HC07 324 aa14.26□□□□□ -0.13
LRRC28-210ENST00000558879 INSIG2Q9Y5U4 225 aa14.26□□□□□ -0.13
LRRC28-210ENST00000558879 DHRS12A0PJE2 317 aa14.25□□□□□ -0.13
LRRC28-210ENST00000558879 RIIAD1A6NNX1 92 aa14.25□□□□□ -0.13
LRRC28-210ENST00000558879 IFNGP01579 166 aa14.25□□□□□ -0.13
LRRC28-210ENST00000558879 WNT2P09544 360 aa14.25□□□□□ -0.13
LRRC28-210ENST00000558879 BLVRAP53004 296 aa14.25□□□□□ -0.13
LRRC28-210ENST00000558879 ZNF154Q13106 437 aa14.25□□□□□ -0.13
LRRC28-210ENST00000558879 ESCO2Q56NI9 601 aa14.25□□□□□ -0.13
LRRC28-210ENST00000558879 GLYATL3Q5SZD4 288 aa14.25□□□□□ -0.13
LRRC28-210ENST00000558879 TRPM8Q7Z2W7 1104 aa14.25□□□□□ -0.13
LRRC28-210ENST00000558879 C1orf87Q8N0U7 546 aa14.25□□□□□ -0.13
LRRC28-210ENST00000558879 OR6K6Q8NGW6 343 aa14.25□□□□□ -0.13
LRRC28-210ENST00000558879 DVL3Q92997 716 aaPredicted RBP14.25□□□□□ -0.13
LRRC28-210ENST00000558879 ERGIC1Q969X5 290 aa14.25□□□□□ -0.13
LRRC28-210ENST00000558879 DACT3Q96B18 629 aaPredicted RBP14.25□□□□□ -0.13
LRRC28-210ENST00000558879 COPS4Q9BT78 406 aa14.25□□□□□ -0.13
LRRC28-210ENST00000558879 SLC22A4Q9H015 551 aa14.25□□□□□ -0.13
LRRC28-210ENST00000558879 OPA3Q9H6K4 179 aa14.25□□□□□ -0.13
LRRC28-210ENST00000558879 IGHV3-64DA0A0J9YX35 117 aa14.24□□□□□ -0.13
LRRC28-210ENST00000558879 FAM183AA6NL82 134 aa14.24□□□□□ -0.13
LRRC28-210ENST00000558879 CD300LBA8K4G0 201 aa14.24□□□□□ -0.13
LRRC28-210ENST00000558879 ZNF593O00488 134 aaPredicted RBP14.24□□□□□ -0.13
LRRC28-210ENST00000558879 HOXB6P17509 224 aaKnown RBP14.24□□□□□ -0.13
LRRC28-210ENST00000558879 KLBQ86Z14 1044 aa14.24□□□□□ -0.13
LRRC28-210ENST00000558879 IQCF1Q8N6M8 205 aa14.24□□□□□ -0.13
LRRC28-210ENST00000558879 SPSB4Q96A44 273 aa14.24□□□□□ -0.13
LRRC28-210ENST00000558879 SLC7A6OSQ96CW6 309 aaPredicted RBP14.24□□□□□ -0.13
LRRC28-210ENST00000558879 SLC6A7Q99884 636 aa14.24□□□□□ -0.13
LRRC28-210ENST00000558879 TMEM246Q9BRR3 403 aa14.24□□□□□ -0.13
LRRC28-210ENST00000558879 ADAT1Q9BUB4 502 aaKnown RBP14.24□□□□□ -0.13
LRRC28-210ENST00000558879 SSBP3Q9BWW4 388 aaPredicted RBP14.24□□□□□ -0.13
LRRC28-210ENST00000558879 NOP16Q9Y3C1 178 aaKnown RBP14.24□□□□□ -0.13
LRRC28-210ENST00000558879 LRRC30A6NM36 301 aa14.23□□□□□ -0.13
LRRC28-210ENST00000558879 H3BN98 237 aa14.23□□□□□ -0.13
LRRC28-210ENST00000558879 XRCC2O43543 280 aa14.23□□□□□ -0.13
LRRC28-210ENST00000558879 FAM20BO75063 409 aa14.23□□□□□ -0.13
LRRC28-210ENST00000558879 RGS9O75916 674 aaPredicted RBP14.23□□□□□ -0.13
LRRC28-210ENST00000558879 ZNF205O95201 554 aa14.23□□□□□ -0.13
LRRC28-210ENST00000558879 SLC2A1P11166 492 aa14.23□□□□□ -0.13
LRRC28-210ENST00000558879 RPS2P15880 293 aaKnown RBP14.23□□□□□ -0.13
LRRC28-210ENST00000558879 CA6P23280 308 aa14.23□□□□□ -0.13
LRRC28-210ENST00000558879 PRKXP51817 358 aa14.23□□□□□ -0.13
LRRC28-210ENST00000558879 GRB2P62993 217 aaKnown RBP14.23□□□□□ -0.13
LRRC28-210ENST00000558879 DNAL1Q4LDG9 190 aa14.23□□□□□ -0.13
LRRC28-210ENST00000558879 FAM201AQ5SY85 155 aa14.23□□□□□ -0.13
LRRC28-210ENST00000558879 PRAMEF6Q5VXH4 476 aa14.23□□□□□ -0.13
LRRC28-210ENST00000558879 TIGD4Q8IY51 512 aa14.23□□□□□ -0.13
LRRC28-210ENST00000558879 RNF133Q8WVZ7 376 aa14.23□□□□□ -0.13
LRRC28-210ENST00000558879 SPRYD4Q8WW59 207 aaPredicted RBP14.23□□□□□ -0.13
LRRC28-210ENST00000558879 INTS14Q96SY0 518 aa14.23□□□□□ -0.13
LRRC28-210ENST00000558879 SUCNR1Q9BXA5 334 aa14.23□□□□□ -0.13
LRRC28-210ENST00000558879 MED20Q9H944 212 aa14.23□□□□□ -0.13
LRRC28-210ENST00000558879 MRPL15Q9P015 296 aaKnown RBP14.23□□□□□ -0.13
LRRC28-210ENST00000558879 MIOXQ9UGB7 285 aa14.23□□□□□ -0.13
LRRC28-210ENST00000558879 OR5V1Q9UGF6 321 aa14.23□□□□□ -0.13
LRRC28-210ENST00000558879 TENM1Q9UKZ4 2725 aa14.22□□□□□ -0.13
LRRC28-210ENST00000558879 TCRBV3S1A0A5B6 114 aa14.22□□□□□ -0.13
LRRC28-210ENST00000558879 GMDSO60547 372 aa14.22□□□□□ -0.13
LRRC28-210ENST00000558879 GLCEO94923 617 aa14.22□□□□□ -0.13
LRRC28-210ENST00000558879 EIF2B1Q14232 305 aaKnown RBP14.22□□□□□ -0.13
LRRC28-210ENST00000558879 OR8G1Q15617 311 aa14.22□□□□□ -0.13
LRRC28-210ENST00000558879 MPPED2Q15777 294 aa14.22□□□□□ -0.13
LRRC28-210ENST00000558879 KLF17Q5JT82 389 aaPredicted RBP14.22□□□□□ -0.13
LRRC28-210ENST00000558879 RHOUQ7L0Q8 258 aa14.22□□□□□ -0.13
LRRC28-210ENST00000558879 PRSS45Q7RTY3 260 aa14.22□□□□□ -0.13
LRRC28-210ENST00000558879 DPY19L4Q7Z388 723 aa14.22□□□□□ -0.13
LRRC28-210ENST00000558879 PAPD5Q8NDF8 572 aaKnown RBP14.22□□□□□ -0.13
LRRC28-210ENST00000558879 OR56B2PQ8NGI1 322 aa14.22□□□□□ -0.13
LRRC28-210ENST00000558879 OR6N2Q8NGY6 317 aa14.22□□□□□ -0.13
LRRC28-210ENST00000558879 BCAS4Q8TDM0 211 aa14.22□□□□□ -0.13
LRRC28-210ENST00000558879 NEIL1Q96FI4 390 aaPredicted RBP14.22□□□□□ -0.13
LRRC28-210ENST00000558879 TOR3AQ9H497 397 aa14.22□□□□□ -0.13
LRRC28-210ENST00000558879 ESM1Q9NQ30 184 aa14.22□□□□□ -0.13
LRRC28-210ENST00000558879 CENPMQ9NSP4 180 aa14.22□□□□□ -0.13
LRRC28-210ENST00000558879 PDP1Q9P0J1 537 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms