RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 ZNF721Q8TF20 911 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 SMPDL3AQ92484 453 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 TMEM45BQ96B21 275 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 PRAP1Q96NZ9 151 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 RHOXF2Q9BQY4 288 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 CHIAQ9BZP6 476 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 MAGT1Q9H0U3 335 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 RAB1BQ9H0U4 201 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 RHBGQ9H310 441 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 MARCH7Q9H992 704 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 FAM120CQ9NX05 1096 aaKnown RBP4.49□□□□□ -1.69
RTF1-204ENST00000558117 SPATA7Q9P0W8 599 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 V9GYY5 206 aaPredicted RBP4.49□□□□□ -1.69
RTF1-204ENST00000558117 MYCBP2O75592 4640 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 DNAH17Q9UFH2 4485 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 PCNX3Q9H6A9 2034 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 A0A075B6Q4 140 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 UQCRHLA0A096LP55 91 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 MDFIC2A0A1B0GVS7 189 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 SRRM5B3KS81 715 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 PSMD12O00232 456 aaPredicted RBP4.48□□□□□ -1.69
RTF1-204ENST00000558117 CCL22O00626 93 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 TP53I11O14683 189 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 ZNF208O43345 1280 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 LCMT2O60294 686 aaKnown RBP4.48□□□□□ -1.69
RTF1-204ENST00000558117 SAP30O75446 220 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 CBR3O75828 277 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 ETHE1O95571 254 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 AGTP01019 485 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 APRTP07741 180 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 ZNF17P17021 662 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 PSMA2P25787 234 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 COILP38432 576 aaPredicted RBP4.48□□□□□ -1.69
RTF1-204ENST00000558117 SSR1P43307 286 aaKnown RBP4.48□□□□□ -1.69
RTF1-204ENST00000558117 CEBPDP49716 269 aaPredicted RBP4.48□□□□□ -1.69
RTF1-204ENST00000558117 PPOXP50336 477 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 CTBP2P56545 445 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 MRPS25P82663 173 aaKnown RBP4.48□□□□□ -1.69
RTF1-204ENST00000558117 EGFEM1PQ0D2K5 195 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 STK11Q15831 433 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 TATDN3Q17R31 274 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 GPAT3Q53EU6 434 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 ZNF311Q5JNZ3 666 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 TCTEX1D4Q5JR98 221 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 LIPKQ5VXJ0 399 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 TTC23Q5W5X9 447 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 NCBP2-AS2Q69YL0 99 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 HIST2H2AA3Q6FI13 130 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 TTC23LQ6PF05 361 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 TMEM64Q6YI46 380 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 BHLHA15Q7RTS1 189 aaPredicted RBP4.48□□□□□ -1.69
RTF1-204ENST00000558117 PHF13Q86YI8 300 aaPredicted RBP4.48□□□□□ -1.69
RTF1-204ENST00000558117 CA13Q8N1Q1 262 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 ZCCHC24Q8N2G6 241 aaKnown RBP4.48□□□□□ -1.69
RTF1-204ENST00000558117 TMEM99Q8N816 258 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 C17orf47Q8NEP4 570 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 OR13C4Q8NGS5 318 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 GIPC3Q8TF64 312 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 POP5Q969H6 163 aaKnown RBP4.48□□□□□ -1.69
RTF1-204ENST00000558117 MS4A14Q96JA4 679 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 NAPGQ99747 312 aaPredicted RBP4.48□□□□□ -1.69
RTF1-204ENST00000558117 TSGA10Q9BZW7 698 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 STMN4Q9H169 189 aaPredicted RBP4.48□□□□□ -1.69
RTF1-204ENST00000558117 P2RX2Q9UBL9 471 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 WIPI2Q9Y4P8 454 aa4.48□□□□□ -1.69
RTF1-204ENST00000558117 APOBP04114 4563 aaKnown RBP4.48□□□□□ -1.69
RTF1-204ENST00000558117 FAM240BA0A1B0GVZ2 78 aa4.47□□□□□ -1.69
RTF1-204ENST00000558117 G3V2L1 256 aa4.47□□□□□ -1.69
RTF1-204ENST00000558117 ANGPTL7O43827 346 aa4.47□□□□□ -1.69
RTF1-204ENST00000558117 CLN5O75503 358 aa4.47□□□□□ -1.69
RTF1-204ENST00000558117 IGKV3-11P04433 115 aa4.47□□□□□ -1.69
RTF1-204ENST00000558117 IFNA16P05015 189 aa4.47□□□□□ -1.69
RTF1-204ENST00000558117 CALB1P05937 261 aa4.47□□□□□ -1.69
RTF1-204ENST00000558117 IGFBP1P08833 259 aaPredicted RBP4.47□□□□□ -1.69
RTF1-204ENST00000558117 STAG3L3P0CL85 134 aa4.47□□□□□ -1.69
RTF1-204ENST00000558117 CT45A8P0DMV1 189 aa4.47□□□□□ -1.69
RTF1-204ENST00000558117 CT45A9P0DMV2 189 aa4.47□□□□□ -1.69
RTF1-204ENST00000558117 ZNF44P15621 663 aa4.47□□□□□ -1.69
RTF1-204ENST00000558117 GATA1P15976 413 aaPredicted RBP4.47□□□□□ -1.69
RTF1-204ENST00000558117 NCF2P19878 526 aaPredicted RBP4.47□□□□□ -1.69
RTF1-204ENST00000558117 AADACP22760 399 aa4.47□□□□□ -1.69
RTF1-204ENST00000558117 SHC1P29353 583 aa4.47□□□□□ -1.69
RTF1-204ENST00000558117 PTGDSP41222 190 aa4.47□□□□□ -1.69
RTF1-204ENST00000558117 GRIA1P42261 906 aa4.47□□□□□ -1.69
RTF1-204ENST00000558117 GPR6P46095 362 aaPredicted RBP4.47□□□□□ -1.69
RTF1-204ENST00000558117 OR3A3P47888 321 aa4.47□□□□□ -1.69
RTF1-204ENST00000558117 MARCKSL1P49006 195 aa4.47□□□□□ -1.69
RTF1-204ENST00000558117 ZNF83P51522 516 aa4.47□□□□□ -1.69
RTF1-204ENST00000558117 HERPUD1Q15011 391 aa4.47□□□□□ -1.69
RTF1-204ENST00000558117 SPHARQ15513 63 aa4.47□□□□□ -1.69
RTF1-204ENST00000558117 TAF1AQ15573 450 aaPredicted RBP4.47□□□□□ -1.69
RTF1-204ENST00000558117 CT45A2Q5DJT8 189 aa4.47□□□□□ -1.69
RTF1-204ENST00000558117 TIMM23BQ5SRD1 257 aa4.47□□□□□ -1.69
RTF1-204ENST00000558117 PYHIN1Q6K0P9 492 aa4.47□□□□□ -1.69
RTF1-204ENST00000558117 CAPN13Q6MZZ7 669 aaPredicted RBP4.47□□□□□ -1.69
RTF1-204ENST00000558117 DCUN1D2Q6PH85 259 aa4.47□□□□□ -1.69
RTF1-204ENST00000558117 TFAP2EQ6VUC0 442 aa4.47□□□□□ -1.69
RTF1-204ENST00000558117 GDPGP1Q6ZNW5 385 aa4.47□□□□□ -1.69
RTF1-204ENST00000558117 GPRIN3Q6ZVF9 776 aa4.47□□□□□ -1.69
RTF1-204ENST00000558117 SSX8Q7RTT4 187 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms